Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq180 123 2e-23 seq103 86.0 6e-12 >seq180 Length=546618 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 || ||||||| | || || ||||| || ||||| || | ||||| | ||| | ||||| Sbjct 252376 CATAATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATC 252435 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 ||||||||| || | |||||| |||||| ||||| ||||| || || || || Sbjct 252436 TTCCGACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGA 252495 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACT 26943 ||||||||| | || | || ||| || ||| | ||||| | ||||| | | || || | Sbjct 252496 CCAACAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAA-CTTTGGCTGATT 252554 Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 | ||||||||||| ||||| ||| | || |||| ||||| | ||||| || Sbjct 252555 ACAACATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 252606 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || || || || || | ||||| | ||| | ||||| | Sbjct 252836 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252895 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | |||||| |||||| ||||| ||||| || || || || || Sbjct 252896 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAG 252955 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 |||||| | || | || ||| || ||| | ||||||| ||||| | | || || || || Sbjct 252956 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGATGGTAGAA-CTTTGGCTGATTACAA 253014 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996 ||||||||| |||||||| | || ||||| ||||| | ||||| ||| Sbjct 253015 CATTCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGA 253063 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || || || || || | ||||| | ||| | ||||| | Sbjct 252608 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252667 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | |||||| |||||| ||||| ||||| || || || || ||| Sbjct 252668 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAA 252727 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 |||||| | || | || ||| || ||| | ||||| | ||||| | | || || || || Sbjct 252728 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAA-CTTTGGCTGATTACAA 252786 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||| ||||| ||| | || |||| ||||| | ||||| || Sbjct 252787 CATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 252834 >seq103 Length=1665694 Score = 86.0 bits (94), Expect = 6e-12 Identities = 280/434 (65%), Gaps = 21/434 (5%) Strand=Plus/Minus Query 119661 TTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAAAGGATTT 119720 |||||||| ||||| ||||| || | | || ||||| | ||| || ||||| || || Sbjct 215325 TTTTCAAAGAAATTGGTCTTACCGGCCAAGGAGATGTTTTCCATGAAGTCGAAGGGGTTG 215266 Query 119721 GCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCACAAACTCG 119780 | | ||| || ||| |||| || | | | || | || ||| || |||||||| Sbjct 215265 GTGGCATTGTAAACCTTCTCGTTACCTAGAGCAACTAATAATCTATCAGCGACAAACTCC 215206 Query 119781 ATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGCGACCGGTAAAGCATTGGTA 119840 | ||||| ||||| | | | ||||| ||||||| | || || ||||||| || Sbjct 215205 ACGTATTGACACATCAACTTACAGTTCATACCCAACAAACTGATTGGCAAAGCATCAGTG 215146 Query 119841 AAGAAATCCTTTTCAATGTCGACCGCTTCTACAAACATACTCAACACCTTGGTCTTGGAG 119900 ||| | ||||||||||| | || ||||| | | | | ||| || || Sbjct 215145 AAGTATTCCTTTTCAATAGCAACAGCTTC---------AGTGATGA-TTTGTTCGACGAT 215096 Query 119901 AGCTTGTTCTTTTCGGGAATATATTTATTGTAGTAT---AGACAAGCAAAGTCGGTGTGT 119957 || | ||| || | | | || | || || ||||| |||||||| || || Sbjct 215095 TTCTGGGTCTGGTCTG--TTTTGCAAATGGGAGAATAAGAGACATGCAAAGTCTGTATGC 215038 Query 119958 AGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAAGCCGGGTAGAGCTCCTTTT 120017 | |||||||||||| |||| | ||| ||| | ||||||| || || | ||| || Sbjct 215037 AAACCTTCGTCTCTGCAAATCAATTCATTGGAGAAAGTCAAACCTGGCATTAAACCTCTT 214978 Query 120018 TTCGAGTCTTTGATATAGTAGATTGCAGCAAAACTACCAGaaaaaaaGACGCCTTCGACG 120077 ||| || | || | || | ||||||| |||| ||| || | ||||| ||| Sbjct 214977 TTC------TTCAACCAGAAAATAGAAGCAAAAGAACCACTAAAGAAAATACCTTCAACG 214924 Query 120078 ATAGCAAAAGCGAC 120091 ||| |||||||| Sbjct 214923 GCAGCGAAAGCGAC 214910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661257193520