Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017-
04-25] 191 sequences; 10,912,061 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq180 123 2e-23
seq103 86.0 6e-12
>seq180
Length=546618
Score = 123 bits (136), Expect = 2e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
|| ||||||| | || || ||||| || ||||| || | ||||| | ||| | |||||
Sbjct 252376 CATAATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATC 252435
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
||||||||| || | |||||| |||||| ||||| ||||| || || || ||
Sbjct 252436 TTCCGACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGA 252495
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACT 26943
||||||||| | || | || ||| || ||| | ||||| | ||||| | | || || |
Sbjct 252496 CCAACAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAA-CTTTGGCTGATT 252554
Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
| ||||||||||| ||||| ||| | || |||| ||||| | ||||| ||
Sbjct 252555 ACAACATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 252606
Score = 118 bits (130), Expect = 1e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || || || || || | ||||| | ||| | ||||| |
Sbjct 252836 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252895
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | |||||| |||||| ||||| ||||| || || || || ||
Sbjct 252896 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAG 252955
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947
|||||| | || | || ||| || ||| | ||||||| ||||| | | || || || ||
Sbjct 252956 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGATGGTAGAA-CTTTGGCTGATTACAA 253014
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996
||||||||| |||||||| | || ||||| ||||| | ||||| |||
Sbjct 253015 CATTCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGA 253063
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || || || || || | ||||| | ||| | ||||| |
Sbjct 252608 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252667
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | |||||| |||||| ||||| ||||| || || || || |||
Sbjct 252668 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAA 252727
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947
|||||| | || | || ||| || ||| | ||||| | ||||| | | || || || ||
Sbjct 252728 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAA-CTTTGGCTGATTACAA 252786
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||| ||||| ||| | || |||| ||||| | ||||| ||
Sbjct 252787 CATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 252834
>seq103
Length=1665694
Score = 86.0 bits (94), Expect = 6e-12
Identities = 280/434 (65%), Gaps = 21/434 (5%)
Strand=Plus/Minus
Query 119661 TTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAAAGGATTT 119720
|||||||| ||||| ||||| || | | || ||||| | ||| || ||||| || ||
Sbjct 215325 TTTTCAAAGAAATTGGTCTTACCGGCCAAGGAGATGTTTTCCATGAAGTCGAAGGGGTTG 215266
Query 119721 GCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCACAAACTCG 119780
| | ||| || ||| |||| || | | | || | || ||| || ||||||||
Sbjct 215265 GTGGCATTGTAAACCTTCTCGTTACCTAGAGCAACTAATAATCTATCAGCGACAAACTCC 215206
Query 119781 ATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGCGACCGGTAAAGCATTGGTA 119840
| ||||| ||||| | | | ||||| ||||||| | || || ||||||| ||
Sbjct 215205 ACGTATTGACACATCAACTTACAGTTCATACCCAACAAACTGATTGGCAAAGCATCAGTG 215146
Query 119841 AAGAAATCCTTTTCAATGTCGACCGCTTCTACAAACATACTCAACACCTTGGTCTTGGAG 119900
||| | ||||||||||| | || ||||| | | | | ||| || ||
Sbjct 215145 AAGTATTCCTTTTCAATAGCAACAGCTTC---------AGTGATGA-TTTGTTCGACGAT 215096
Query 119901 AGCTTGTTCTTTTCGGGAATATATTTATTGTAGTAT---AGACAAGCAAAGTCGGTGTGT 119957
|| | ||| || | | | || | || || ||||| |||||||| || ||
Sbjct 215095 TTCTGGGTCTGGTCTG--TTTTGCAAATGGGAGAATAAGAGACATGCAAAGTCTGTATGC 215038
Query 119958 AGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAAGCCGGGTAGAGCTCCTTTT 120017
| |||||||||||| |||| | ||| ||| | ||||||| || || | ||| ||
Sbjct 215037 AAACCTTCGTCTCTGCAAATCAATTCATTGGAGAAAGTCAAACCTGGCATTAAACCTCTT 214978
Query 120018 TTCGAGTCTTTGATATAGTAGATTGCAGCAAAACTACCAGaaaaaaaGACGCCTTCGACG 120077
||| || | || | || | ||||||| |||| ||| || | ||||| |||
Sbjct 214977 TTC------TTCAACCAGAAAATAGAAGCAAAAGAACCACTAAAGAAAATACCTTCAACG 214924
Query 120078 ATAGCAAAAGCGAC 120091
||| ||||||||
Sbjct 214923 GCAGCGAAAGCGAC 214910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478661257193520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |