Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq147 306 5e-78 seq31 131 2e-25 >seq147 Length=818043 Score = 306 bits (338), Expect = 5e-78 Identities = 1160/1801 (64%), Gaps = 46/1801 (3%) Strand=Plus/Plus Query 62183 GGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATAC 62242 || ||||| | ||| |||||||| ||||| ||||| | || ||| || ||| ||||| Sbjct 276739 GGGTTAACAATTTGGAATTCTCCTGACAACACTCTTCTAGAGTACATGTTAGAAGTATAT 276798 Query 62243 GGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCC 62302 ||||| | | | || || || ||||| ||||||| ||| || ||||| |||||||| || Sbjct 276799 GGTTCGAAACATTCGTTGTTACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATAGGAGCA 276858 Query 62303 ACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAAT 62360 ||||| || ||||| | ||| ||||| | || || | || | || ||||| | Sbjct 276859 ACCAACAATGAGTTTCTTAAACC--ATGTTGGGCCATCTTTTGCTTCAAAGTATCCCAGT 276916 Query 62361 TCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGT 62420 ||| | || | || ||| | | ||| | | || Sbjct 276917 CCCATAATTCGGTTGGCTTTCTGTTCCACAAATCGTATTGCAACAAACCTTGAGAAGCTG 276976 Query 62421 ACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTA 62480 || ||| | || | ||||| || ||||| | | || | |||| | || || | Sbjct 276977 GAGAACCTTCGTAGGATTCGTAAGGACCTTCGATAACTGCCAATTCAATAGAGGCTTCAA 277036 Query 62481 ATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTAT 62540 ||||||| || |||||||||||||| | |||||| || | ||||| | | Sbjct 277037 CAGCACCGTGGTAGATGGTTTCGAAGATTTGAATATTTAATTCCTTGGCTTCTTGAGAGT 277096 Query 62541 CAAATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATA 62599 | ||||| |||| | | || || || | || || || ||||| ||||| | | | || Sbjct 277097 CGAATGG-TAATCTCAAAGCCATGAAAGTATCAGCCAAACCTTGGACACCCAAAGCAATT 277155 Query 62600 GGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATA 62659 ||||| | || |||| || || || || |||| || || | || | || || Sbjct 277156 GGTCTGTTCTTCATATTGGATCTTCTAGACTCAGGAACTGGGTAGAAGTTTCTGTCAATG 277215 Query 62660 ATTTTATTGAGATTTCTG---ACAATTACTTTGACCACATCCTTCAG-TTTGAGAAAAT- 62714 ||| | || | |||||| |||| ||| || | || | || ||| ||| | Sbjct 277216 ATTCTGTTCAAGTTTCTGGTGACAAC--CTTAGAA-ATTTCGTGCAACTTTTCGAAGTTG 277272 Query 62715 ---CAAATCGCC----CATCTATTACAA----ACATGTTCAATGCAACAGATGCCAGATT 62763 ||| | | |||| || ||| | ||| | || |||| ||| |||| || Sbjct 277273 TACCAAGTGGAGTTTTCATCGGTTTCAACAAAAGATGGTAAA-GCAATAGAAGCCAAGTT 277331 Query 62764 ACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACA 62823 ||| ||||| || || | || || | |||| | || ||| || | ||| | | Sbjct 277332 ACAGACGGCAACTTCTTCAGGGTCTGAGTATTCAACAATTTCACAACACAAGTTAGAAGA 277391 Query 62824 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 62883 |||||| | || || || | |||||| |||| |||||||| || ||||| || | || Sbjct 277392 TTTGATGATACCCAAGTTCTTTTGATTGGTCTTCTTGTTACAAGCGTCCTTGTACAACAT 277451 Query 62884 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT-CGAGCCT 62942 ||| |||||||| ||||| | |||| ||| | ||| || | ||| | ||| | | || Sbjct 277452 GAAAGGAGTACCGGTTTCGGTTTGAGCTTCCAAAATTGCGTACCACA--ACTTCTGGGCT 277509 Query 62943 TTATTATAGATT-TGTATCTCT--TTTCTCTTTCGTATAGTGTATACAATCGTTCGAACT 62999 || || | || | || |||| |||| ||||||||| ||||| | ||| | Sbjct 277510 TTG--ATGGTTTGTCTACCTCTATTTTCACTTTCGTATTTCTCGTACAAAGTCTTGAATT 277567 Query 63000 CGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTC 63059 | || || |||||| | | || || ||||| ||| | | ||| | ||| || | Sbjct 277568 CATCACCATAAACATCAGCTAAACCTGGGGCTTCATTTGGAGAGAACAAAGTCCAGTCAC 277627 Query 63060 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63119 | | | | |||| || |||||| | ||| |||||||| | ||| || | ||||| Sbjct 277628 CATTCTTTTCAACTCTTTCCATAAACAAATCTGGAATCCACAAGGCTGGGAACAAATCTC 277687 Query 63120 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 63179 ||| ||| ||| || ||||| ||||||| | | |||| ||| | | |||||| | Sbjct 277688 TGGCTCTGATTTCTTCTTTTCCGTGATTCTTTCTGATGTCGATGAAGTCGAAAATATCGG 277747 Query 63180 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 63239 | ||||| || || ||||| | ||| | | | ||||| | ||||| || || || || | Sbjct 277748 AGTGCCATGGCTCTAAGTACAAGGCAAAAGCACCAGGTCTCTTGTTACCACCTTGGTCGA 277807 Query 63240 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCAT 63299 |||||| || ||||| || | || || | ||| ||||| ||||| ||||| ||||| | Sbjct 277808 CGTATCTGGCAGTGTTGTTGAATACCCTGACCATAGGAATGATACCGTTGGAAGTACCGT 277867 Query 63300 TGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCC 63359 | || || | || || ||| | | |||||| ||| | ||| || || | Sbjct 277868 TAGTACCAGCAATGTAAGCACCAGTACTTCTAATATTGTGAATGTGCAAACCAATACCAC 277927 Query 63360 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 63419 | || | || || || || || ||| || || || || || || || || ||| | Sbjct 277928 CAGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTGTCGTAAATACCATCGATAGAGT 277987 Query 63420 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 63479 ||||| ||||| | | ||||| ||||| || ||| ||| || ||||| | Sbjct 277988 CATCCTTCATGGCCACCAAGAAACAAGACGACATCTGAGGACTTGGAGTACCAGCATTGA 278047 Query 63480 ATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 63539 | ||||| ||||| ||||||| || || ||| ||| | | ||||| |||||||| Sbjct 278048 ACAAGGTTGGAGACCCGTGAGTGAAGTATCTTTGAGACATGTGGTTGTAGGTCTCAATGA 278107 Query 63540 CTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 63598 | || || || || | || || || || || || | ||| | || ||| || ||| Sbjct 278108 CCTTTTCAATGTCGTCACCG-TGGATACCAACAGCAACTCTCATGATCAAGTGTTGTGGT 278166 Query 63599 CTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 63658 || || | | || || |||| ||||||| || ||| ||||||| || || |||||| Sbjct 278167 CTCTCGGCCACTTTACCGTCTATTCTCAACAAATACGATCTTTCCAAGGTCTTGAAACCA 278226 Query 63659 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATAT 63718 ||||| ||||| |||||| || ||||| | |||| ||||||| | || | || Sbjct 278227 AAATAATTGTAGTTAAAGTCACGGTCGTACACAATAGCCGAGTTTAATTCGTTGGCATGC 278286 Query 63719 TTGTTAACTACATCCATGGTAA--TACT--TGAAATAATAGGAAAATGTTTCCCATTTTT 63774 || | | | | |||| | || |||||| || || |||| || || | || Sbjct 278287 TTTTGGATGA----TGTTGTAAGTTTCTTCTGAAATCATGGGCGAATGCTTACCGGTCTT 278342 Query 63775 AGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTT 63834 || || | || | | | || |||| ||| | | || | || | |||| ||| Sbjct 278343 TGGGTTAATGTAATCGTACAATTCCTTGGACACCTGGGAATATTGCTTGGTGGTTTGTTT 278402 Query 63835 GTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGT 63894 ||| | || || ||||| ||||| || || | |||||| || || || || || || Sbjct 278403 GTGCAAGTTGGACACGGCGATTCTGGCCGCCAAAATGGCGTAGTCAGGGTGGATCGTGGT 278462 Query 63895 ACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTAT 63953 || || ||| || |||||||||||| ||||||| || | || || ||||| | || Sbjct 278463 -CATGTAGGCCGCAGTTTCGGCTGCCAAGTTGTCCAACTCGATGGTGGTGACACCTTGAT 278521 Query 63954 A 63954 | Sbjct 278522 A 278522 >seq31 Length=351742 Score = 131 bits (144), Expect = 2e-25 Identities = 325/477 (68%), Gaps = 20/477 (4%) Strand=Plus/Minus Query 62810 CAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCA 62869 || ||||| | ||||||||||||| || | ||| || || ||| | ||||| ||| Sbjct 239901 CAGAGATTTGAAGACTTGATGGTTCCCAAGTGTTGGTGGTTTGACTTCATATTACAAGCA 239842 Query 62870 TCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC---TATAATCGCTTTC 62926 ||||| || | || | ||| |||||||| ||||||| || |||| || | | Sbjct 239841 TCCTTGTACAACATATAGGGACCCCCAGTTTCGGTCTGAGACTCAAGTATACTC---TGC 239785 Query 62927 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTAT 62984 || | | | ||||| | | |||| | | ||| |||| | ||||| || || Sbjct 239784 CACAACTTTTGGGCCTTAACAACC--TTTGCAGCCCTTCCTTCTTTCTCGTACCGTTCAT 239727 Query 62985 ACAATCGTTCGAACTCGTCTCCCCAAACAT-TGTCCAGTCCAGGACATTCATCC-GGACA 63042 |||| | ||||||||||| || || || | || || ||||| |||||| || | Sbjct 239726 ACAAGATATTAAACTCGTCTCCGTAACAATCTGACAAG-CCTGGACACTCATCCGGGGTA 239668 Query 63043 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63102 || ||| |||| ||| ||| ||| || || | ||| || | || |||||||| || Sbjct 239667 AATAAAC-ACCAGTCTTCGTTATCTTTGACCTTCTGCATGAATAAGTCGGGAATCCAGAG 239609 Query 63103 AGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA-TTCTTTTTAAGATCG 63160 | ||| |||| |||||| || || || || ||||| ||| ||||| | | ||| Sbjct 239608 -TCCATAGAATAAATCTCTTGTCCTCAACTCTTCCTTTCC-GTAGTTCTTCCTCAAATC- 239552 Query 63161 AGGAACGCCATA-ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63219 | |||| || | | ||||| ||||||||| || | |||||| || | | | || || | Sbjct 239551 AAGAACATCAAACACATCAGCATGCCACGGCTCAATGTATATAGCAAAAGCACCGGGTCT 239492 Query 63220 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63276 ||| ||||| || ||||| | ||||||||| || | ||| | ||||| | |||||| Sbjct 239491 TTTATTTCCACCTTGATCAACGTATCTAGCTGTATCATTGAACACTCTAAGCATTGG 239435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630487203600