Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017-
04-25] 191 sequences; 10,912,061 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq180 136 3e-27
>seq180
Length=546618
Score = 136 bits (150), Expect = 3e-27
Identities = 170/230 (74%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| ||||||||||| ||||||| | ||||| || || ||
Sbjct 252608 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252667
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| || || || || || | || | ||| ||||| ||||| |||||||| |||
Sbjct 252668 GACACCATTGA--CAATGTCAAATCCAAGATTCA-AGACAAGGAAGGAATTCCACCAGAC 252724
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | || || ||||| || ||||| ||||| | | | ||| ||| ||||||
Sbjct 252725 CAACAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTAC 252784
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| |||||||| |||||||| || || || || | || | ||||| ||
Sbjct 252785 AACATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 252834
Score = 134 bits (148), Expect = 1e-26
Identities = 170/231 (74%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| ||||||||||| ||||||| | ||||| || || ||
Sbjct 252836 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252895
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| || || || || || | || | ||| ||||| ||||| |||||||| |||
Sbjct 252896 GACACCATTGA--CAATGTCAAATCCAAGATTCA-AGACAAGGAAGGAATTCCACCAGAC 252952
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| || | | || || ||||| || ||||| ||||||| | | ||| ||| ||||||
Sbjct 252953 CAGCAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGATGGTAGAACTTTGGCTGATTAC 253012
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226
|| |||||||| ||||| || || || || || | || | ||||| |||
Sbjct 253013 AACATTCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGA 253063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433326991293665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |