Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017-
04-25] 191 sequences; 10,912,061 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq180 154 1e-32
seq147 127 2e-24
seq158 111 1e-19
>seq180
Length=546618
Score = 154 bits (170), Expect = 1e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| ||||||||||| || ||||| || ||||| | ||||| ||| | ||
Sbjct 252380 ATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252439
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || ||||| || |||||||||||||| || |||||||| || |||
Sbjct 252440 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAA 252499
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || ||||| || || || || || | || | | |||||||||
Sbjct 252500 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTACAAC 252559
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| |||||||| | || || |||||| ||||| | || |||
Sbjct 252560 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGT 252607
Score = 145 bits (160), Expect = 6e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || || |||||||| || ||||| | ||||| ||| | ||
Sbjct 252608 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252667
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || ||||| || |||||||||||||| || |||||||| || |||
Sbjct 252668 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAA 252727
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || ||||| || || || || || | || | | |||||||||
Sbjct 252728 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTACAAC 252787
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| |||||||| | || || |||||| ||||| | || |||
Sbjct 252788 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGT 252835
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || || |||||||| || ||||| | ||||| ||| | ||
Sbjct 252836 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252895
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || ||||| || |||||||||||||| || |||||||| || ||
Sbjct 252896 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAG 252955
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || ||||| || || || || ||| | || | | |||||||||
Sbjct 252956 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGATGGTAGAACTTTGGCTGATTACAAC 253015
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|||||||| ||||| ||| | || || || ||| ||||| | || ||
Sbjct 253016 ATTCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 253062
>seq147
Length=818043
Score = 127 bits (140), Expect = 2e-24
Identities = 714/1115 (64%), Gaps = 46/1115 (4%)
Strand=Plus/Plus
Query 128778 CTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCC 128837
|||||| | ||||||| || ||| | || || | | ||| | |||||||||||| ||
Sbjct 276393 CTTGTCAATAGTAAATTGGATGGCGGCAGCAGCAGCTTGGGTTCTCAAATAGTACATACC 276452
Query 128838 TGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACA-ATGCGTAGGTGG 128896
|| || | ||| | |||||| || | ||| || | |||||| | | | | |||
Sbjct 276453 AGTCTTAAGACCCTTCTTCCAACCGTAGAAGTGCATTGAGGTCAATTTACCCATTGTTGG 276512
Query 128897 GTTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAG 128956
|| | | |||||| || ||||| ||||||||| || | | | ||||| |
Sbjct 276513 GTCCT-TGATGTGAATATTCAAGGATTGGGATTGATCAATGAAAGCAGCTCTGTCGGCGG 276571
Query 128957 CCATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTA--AAGCTCTCTCAC 129014
|||| | || | || ||| |||||||| ||||| || || |||| || | |
Sbjct 276572 CCATGTCGATGATATGTTTTTGGGAGATTTCCCATACCGTCTTATACAAAGC-CT-TGAT 276629
Query 129015 GTGTTTTGGTAT-TTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTC 129073
| | ||| || || |||| | || | | |||||||||| ||| || ||||||
Sbjct 276630 TTCATCTGGGATGTTGGTCAAACCT-TGAATGGAACCGTTGTTTGAAATGATGTTGTTTT 276688
Query 129074 GCATCTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATTA 129133
||| |||||| | | | || | | |||||| | ||||||| ||| | |
Sbjct 276689 TCATGGATTCGTTCCAAAGACCCAAATCAACCAAATCCTTCAACAAGTATGGGTTAACAA 276748
Query 129134 CTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACG 129193
||| || || || | ||| || | | | ||| ||||| || | || || ||
Sbjct 276749 TTTGGAATTCTCCTGACAACACTCTTCTAGAGTACATGTTAGAAGTATATGGTTCGAAAC 276808
Query 129194 ATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGCG 129253
|||| ||||| || || ||||||| || | || || ||||| ||| || | | |
Sbjct 276809 ATTCGTTGTTACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATAGGAGCAACCAACAATG 276868
Query 129254 AGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCC-AGTCCCACA--TCG 129310
|||||| ||||| || || || | || || || || ||| ||||||| | |||
Sbjct 276869 AGTTTCTTAAACCATGTTGGGCCATCTTTTGCTTCAAA-GTATCCCAGTCCCATAATTCG 276927
Query 129311 ATGTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAA 129370
| ||| | | || |||||||| ||||||||||| | ||| | | | ||||| |
Sbjct 276928 GT-TGGCTTTCTG-TTCCACAAATCGTATTGCAACAAACC-----TTGAGAAGCTGGAGA 276980
Query 129371 A-----GTAGGAATCGTGCACGCCGTAAGCTTT-TGCCAATTCGCAACTCGCTTCCAATG 129424
| |||||| |||| | | | | | | ||||||||| | ||||| | |
Sbjct 276981 ACCTTCGTAGGATTCGTA-AGGACCTTCGATAACTGCCAATTCAATAGAGGCTTCAACAG 277039
Query 129425 CGCCAAAATAAATTGTTTCGGCAATTTTGGTGTTCAACACTTTGGCCTGGTCGCTTTCGT 129484
| || || || |||||| |||| | || || | ||||| | | |||
Sbjct 277040 CACCGTGGTAGATGGTTTCGAAGATTTGAATATTTAATTCCTTGGCTTCTTGAGAGTCGA 277099
Query 129485 ACGGCATACGCAA---CATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGG 129541
| || | | ||| |||| || || || ||||||||||| | ||||| | | || |
Sbjct 277100 ATGGTAATCTCAAAGCCATG---AAAGTATCAGCCAAACCTTGGACACCCAAAGCAATTG 277156
Query 129542 GTCGATGTT-TTC-TATTGGATTTTTGTGCCGACAACAA-GGGATAGTAGTTGATGTCTA 129598
||| |||| ||| |||||||| || | | || || || ||| |||| |||| |
Sbjct 277157 GTC--TGTTCTTCATATTGGATCTTCTAGAC-TCAGGAACTGGGTAGAAGTTTCTGTCAA 277213
Query 129599 TAATTTTGTTTAAATTCTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGT 129658
| ||| |||| || || || |||| || | | | | ||| |||| || ||||
Sbjct 277214 TGATTCTGTTCAAGTTTCTGGTGACAACCTTAGAAATTTCGTGCAACTTTTCGAAGTTGT 277273
Query 129659 AC------TCGCCTACATCGATGTCGACAAATTGATTG-ACACAAATCGAGGCCAAATTG 129711
|| | | ||||| | || ||||| ||| | | | ||| || ||||| ||
Sbjct 277274 ACCAAGTGGAGTTTTCATCGGTTTCAACAAA-AGATGGTAAAGCAATAGAAGCCAAGTTA 277332
Query 129712 CAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTT 129771
||||||||| ||| | ||| ||| || |||||||| ||||| ||| | |
Sbjct 277333 CAGACGGCAACTTCTTCAGGGTCTGAGTATTCAACAATTTCACAACACAAGTTAGAAGAT 277392
Query 129772 TTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATG 129831
|| ||| | ||||| | ||||||||| | ||| |||| ||||| || ||||||| ||||
Sbjct 277393 TTGATGATACCCAAGTTCTTTTGATTGGTCTTCTTGTTACAAGCGTCCTTGTACAACATG 277452
Query 129832 TACGGCGTGCCCGTTTCGACTTGCGTTTCGACAAT 129866
| || || || |||||| ||| | ||| | |||
Sbjct 277453 AAAGGAGTACCGGTTTCGGTTTGAGCTTCCAAAAT 277487
>seq158
Length=604990
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| ||||| ||||| || || || ||||| || | || | ||||| || ||
Sbjct 572526 AAGATGCAGATTTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGAGTCC 572467
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | || || ||||| || || ||||||||||| || |||||||| ||
Sbjct 572466 TCCGACACCATTGATAATGTCAAATCCAAGATCCAAGACAAGGAAGGAATTCCACCAGAC 572407
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || || || || || || || || ||| | || | | || |||
Sbjct 572406 CAACAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGGCTGACTAC 572347
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| ||||| |||||||| | || || || || ||||| | || |||
Sbjct 572346 AACATCCAAAAGGAATCCACTCTTCACTTGGTGTTAAGATTGAGAGGTGGT 572296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727022951915
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |