Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq147 143 3e-29 seq125 104 3e-17 >seq147 Length=818043 Score = 143 bits (158), Expect = 3e-29 Identities = 921/1460 (63%), Gaps = 49/1460 (3%) Strand=Plus/Plus Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATG 114013 || ||||| || || || || ||||||||||||||||| | || || || || ||||| Sbjct 276793 GTATATGGTTCGAAACATTCGTTGTTACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATA 276852 Query 114014 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCC 114073 || || | | | ||| | | ||| | || || || ||| | | ||| Sbjct 276853 GGAGCAACCAACAATGAGTTTCTTAAACCATGTTGGGCCATCTTTTGCTTCAAAGTATCC 276912 Query 114074 CAGTCG--TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGG 114131 ||||| || || | ||| || | | ||||| ||| | || | | |||||| | Sbjct 276913 CAGTCCCATAATTCGG--TTGGCTTTCTGTTCCACAAATCGTATTGCAACAAACCTTGAG 276970 Query 114132 AGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCG---GAGC 114188 | ||||| || || || | | ||||| || || || | | |||||||| ||| Sbjct 276971 AAGCTGGAGAACCTTCGTAGGATTCGTAAGGACCTTCGATAACTGCCAATTCAATAGAG- 277029 Query 114189 TCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCT 114248 || || | || |||| || || || || || || || ||| | | ||||||| | Sbjct 277030 --GCTTCAACAGCACCGTGGTAGATGGTTTCGAAGATTTGAATATTTAATTCCTTGGCTT 277087 Query 114249 CGTCGGAATCAAACGCGAGTCGGCACAAA---ATAAATACATCCGCGAGACCTTGGACAC 114305 | | || || || | | || |||| || || ||| || | ||||||||||| Sbjct 277088 CTTGAGAGTCGAATGGTAATCT---CAAAGCCATGAAAGTATCAGCCAAACCTTGGACAC 277144 Query 114306 CGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAA 114362 | | ||||||| | | ||||||| || ||| || ||| || || || | Sbjct 277145 CCAAAGCAATTGGTCTGTTCTTCATATTGGATCTTCTAGA---CTCAGGAACTGGGTAGA 277201 Query 114363 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 114422 | || || || || | || || | ||| ||||||||||||| | ||||| || | || Sbjct 277202 AGTTTCTGTCAATGATTCTGTTCAAGTTTCTGGTGACAACCTTAGAAATTTCGTGCAACT 277261 Query 114423 TTTCGTAATCAAAAC---TGCGAGTCT-CTTCATTGACATACTTAGGAAGG----GCGAT 114474 ||||| | | | | || |||| | | || | || || | || || || || Sbjct 277262 TTTCGAAGTTGTACCAAGTG-GAGTTTTCATCGGTTTCA-ACAAAAGATGGTAAAGCAAT 277319 Query 114475 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 114534 || |||| ||||| || | || || || | ||| || | |||||| ||| Sbjct 277320 AGAAGCCAAGTTACAGACGGCAACTTCTTCAGGGTCTGAGTATTCAACAATTTCACAACA 277379 Query 114535 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 114594 ||| || ||| || ||| | ||||||||||||||||| | ||| ||||||| || || Sbjct 277380 CAAGTTAGAAGATTTGATGATACCCAAGTTCTTTTGATTGGTCTTCTTGTTACAAGCGTC 277439 Query 114595 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA- 114653 |||||| | |||| | || || || || || ||||| | | | ||| || | ||| | Sbjct 277440 CTTGTACAACATGAAAGGAGTACCGGTTTCGGTTTGAGCTTCCAAAATTGCGTACCACAA 277499 Query 114654 CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCC----TCGTACTTTGTGTAG 114709 | || | |||| | || ||| || | | | | ||||| || ||| Sbjct 277500 CTTCTG-GGCTTTGATGGT----TTGTCTACCTCTATTTTCACTTTCGTATTTCTCGTAC 277554 Query 114710 AGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAG 114769 | | | || || ||||| | || | | ||||| || | || ||| |||| Sbjct 277555 AAAGTCTTGAATTCATCACCATAAACATCAGCTAAACCTGGGGCTTCATTTGGAGAGAAC 277614 Query 114770 AGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCT 114829 | || ||| | |||| || ||||| | | ||| || | ||||| ||||| | ||| Sbjct 277615 AAAGTCCAGTCACCATTCTTTTCAACTCTTTCCATAAACAAATCTGGAATCCACAAGGCT 277674 Query 114830 GAGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888 | ||| | ||| | | | || |||||| | || ||||| | | || | || Sbjct 277675 GGGAACAAATCTCTGGCTCTGAT-TTCTTCTTTTCCGTGATTCTTTCTGATGTCGATGAA 277733 Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACGACG-- 114945 ||| | ||||| | |||||| || || | ||||| || | | ||| | | Sbjct 277734 GTCGAAAATATCGGAGTGCCATGGCTCTAAGTACAAGGCAAAAGCACCAGGTCTCTTGTT 277793 Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005 |||| | |||| || || || || ||| || ||||| | | ||| ||||||||||| Sbjct 277794 ACCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAATACCCTGACCATAGGAATGATACC 277853 Query 115006 ATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTG 115065 | || || || || || ||| || | | ||| | || || ||||| Sbjct 277854 GTTGGAAGTACCGTTAGTACCAGCAATGTAAGCACCAGTACTTCTAATATTGTGAATGTG 277913 Query 115066 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 115125 || ||||||||| || || | ||| || || || || | | | || |||| || Sbjct 277914 CAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTGTCGTAAAT 277973 Query 115126 CCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGG 115185 || ||||| |||||| |||| | || | | ||| || |||||| || || ||||| Sbjct 277974 ACCATCGATAGAGTCATCCTTCATGGCCACCAAGAAACAAGACGACATCTGAGGACTTGG 278033 Query 115186 TGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATC 115245 |||||||| ||||| | |||||| | | |||| |||| | ||| ||||| | | Sbjct 278034 AGTACCAGCATTGAACAAGGTTGGAGACCCGTGAGTGAAGTATCTTTGAGACATGTGGTT 278093 Query 115246 GTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAA 115305 ||||||||| | ||| |||||| || ||||| ||||| | | || | ||| | Sbjct 278094 GTAGGTCTCAATGACCTTTTCAATGTCGTCACCGTGGATACCAACAGCAACTCTCATGAT 278153 Query 115306 CATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAAC-TCTTCTCCA 115364 || || ||| ||| | || || |||| || | ||| | || |||| |||| Sbjct 278154 CAAGTGTTGTGGTCTCTCGGCCACTTTACCGTCTATTCTCAACAAATACGATCTT-TCCA 278212 Query 115365 AGGTCTTGAGACCAAAATAA 115384 ||||||||| |||||||||| Sbjct 278213 AGGTCTTGAAACCAAAATAA 278232 >seq125 Length=1080664 Score = 104 bits (114), Expect = 3e-17 Identities = 165/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 10958 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACT 11017 ||||| | || ||||||||||| | || || ||| | || |||||| | ||| | | Sbjct 456990 TTACCAATAGCATCAATTTCATCAACAAAGACAATAGATGGGGCATTTTCTCTGGCCATT 456931 Query 11018 TCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCG 11077 | ||| | ||| |||||||| |||||||| ||||| ||||| || ||||| | | Sbjct 456930 TGAAACAAATCACGGACTCTTGAAGCACCGACTCCCACGAACATCTCTACAAACTCAGAA 456871 Query 11078 GCGGA-ACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGT 11136 | || ||| | | ||||||||| | || ||||||||| ||||| ||||| | ||| Sbjct 456870 CCAGATACAGAGTA-GAAGGGGACTTCGGCTTCACCCGCAGTGGCTTTAGCGAGCAAGGT 456812 Query 11137 CTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 11190 ||| || || |||||| || | | || |||||| | || || ||||||| Sbjct 456811 CTTACCGGTACCAGGTGGACCAGATAAAATGGCACCTCTGGGAATTTTGGCACC 456758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352173818280