Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017-
04-25] 191 sequences; 10,912,061 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq180 104 3e-17
seq158 84.2 2e-11
>seq180
Length=546618
Score = 104 bits (114), Expect = 3e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||| ||||| || | ||| ||||||||||| |||||||||||
Sbjct 252835 ACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGC 252776
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| ||| | |||| || | |||||||| ||||| || | || || ||||| | |||
Sbjct 252775 CAAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGG 252716
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| | ||||||| | ||| | || | ||||| | | | |||||| ||||| |
Sbjct 252715 AATTCCTTCCTTGT-CTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAA 252657
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | |||||||| || || || | ||||| || || ||||||||
Sbjct 252656 CTTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252608
Score = 102 bits (112), Expect = 9e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||| ||||| || | ||| ||||||||||| |||||||||||
Sbjct 252607 ACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGC 252548
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| ||| | |||| || | |||||||| ||||| || | || || ||||| | |||
Sbjct 252547 CAAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGG 252488
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| | ||||||| | ||| | || | ||||| | | | |||||| ||||| |
Sbjct 252487 AATTCCTTCCTTGT-CTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAA 252429
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
| || | |||||||| || || || | || || || || |||||||||
Sbjct 252428 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCATT 252379
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| ||||| || | ||| ||||| || | || ||||||||||| ||||||||||||
Sbjct 253062 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGCC 253003
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
| ||| | | || || | |||||||| ||||| || | || |||||||| | |||
Sbjct 253002 AAAGTTCTACCATCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGA 252943
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | ||||||| | ||| | || | ||||| | | | |||||| ||||| ||
Sbjct 252942 ATTCCTTCCTTGT-CTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 252884
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | |||||||| || || || | ||||| || || ||||||||
Sbjct 252883 TTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252836
>seq158
Length=604990
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | |||||||| || | ||| |||||||| || ||||| |||||
Sbjct 572296 ACCACCTCTCAATCTTAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGC 572355
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| ||| | | || || | |||||||||||||| || | || || ||||| | |||
Sbjct 572356 CAAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGG 572415
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | |||||||| ||| || ||||| | | | |||||| || || ||
Sbjct 572416 AATTCCTTCCTTGTCTTGGATCTTGGATTTGACATTATCAATGGTGTCGGAGGACTCGAC 572475
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
|| | || ||||| || || || | ||||| || || || ||||| ||
Sbjct 572476 TTCCAAGGTAATGGTCTTACCAGTCAAGGTCTTAACGAAAATCTGCATCTT 572526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543211503079440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |