Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq180 116 4e-21 seq158 93.3 4e-14 >seq180 Length=546618 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | || | |||| || ||||| ||||||||||||||||| || Sbjct 252607 ACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGC 252548 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| | ||||| ||||| | || | | || ||||| || || Sbjct 252547 CAAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGG 252488 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||| || ||||| || || || ||| || | || || | || || Sbjct 252487 AATTCCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 252428 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||| | ||| | |||||| || ||||||||||| ||||||||||||||| Sbjct 252427 TTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCATT 252379 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | || | |||| || ||||| ||||||||||||||||| || Sbjct 252835 ACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGC 252776 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| | ||||| ||||| | || | | || ||||| || || Sbjct 252775 CAAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGG 252716 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||| || ||||| || || || ||| || | || || | || || Sbjct 252715 AATTCCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 252656 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | |||||| |||||||| || || |||||||||||||| Sbjct 252655 TTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252608 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || | |||||| | || | |||| || ||||| ||||||||||||||||| || Sbjct 253062 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGCC 253003 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || | | ||||| | ||||| ||||| | || | | |||||||| || ||| Sbjct 253002 AAAGTTCTACCATCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGA 252943 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 |||||||| || ||||| || || || ||| || | || || | || ||| Sbjct 252942 ATTCCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACT 252883 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | |||||| |||||||| || || |||||||||||||| Sbjct 252882 TCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252836 >seq158 Length=604990 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| | |||| || ||||| ||||| |||||||| || || Sbjct 572296 ACCACCTCTCAATCTTAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGC 572355 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | ||||| | ||||| || || |||| | | || ||||| || || Sbjct 572356 CAAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGG 572415 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||| || ||||| || || || ||| || | || || || || || Sbjct 572416 AATTCCTTCCTTGTCTTGGATCTTGGATTTGACATTATCAATGGTGTCGGAGGACTCGAC 572475 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||| | || | |||||| || ||||| || || |||||||| ||||| || Sbjct 572476 TTCCAAGGTAATGGTCTTACCAGTCAAGGTCTTAACGAAAATCTGCATCTT 572526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643607098040