Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq180 131 2e-25 seq158 114 1e-20 >seq180 Length=546618 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || ||||||||||| || || ||||| | ||| || | Sbjct 253050 CTCAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACCA 252991 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || ||| | ||||||| ||||||||| || ||||| ||||| || Sbjct 252990 TCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGAATTCCTTCCTTG 252931 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || ||||| || | |||||||||||| || ||||| | ||| | Sbjct 252930 TCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGATG 252871 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | || || || ||||||||||| Sbjct 252870 GTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252836 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || ||||||||||| || || ||||| | ||| || Sbjct 252594 CTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACCG 252535 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || ||| | ||||||| ||| ||||| || ||||| ||||| || Sbjct 252534 TCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTG 252475 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || ||||| || | |||||||||||| || ||||| | ||| | Sbjct 252474 TCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGATG 252415 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | |||||| || ||||||||||| Sbjct 252414 GTCTTACCAGTCAAAGTTTTAACGAAAATTTGCAT 252380 Score = 122 bits (134), Expect = 8e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || ||||||||||| || || ||||| | ||| || Sbjct 252822 CTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACCG 252763 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || ||| | ||||||| ||| ||||| || ||||| ||||| || Sbjct 252762 TCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTG 252703 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || ||||| || | |||||||||||| || ||||| | ||| | Sbjct 252702 TCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGATG 252643 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | || || || ||||||||||| Sbjct 252642 GTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252608 >seq158 Length=604990 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 || ||||| | || || || |||||||||||||| || || || | ||| | | Sbjct 572309 CTTAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGCCAAAGTTCTTCCA 572368 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || ||| | ||||||| ||| ||||| || ||||| ||||| || Sbjct 572369 TCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTG 572428 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || ||||| || | ||||||||| ||||||||||| | |||| Sbjct 572429 TCTTGGATCTTGGATTTGACATTATCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATG 572488 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || | || || || ||||| |||||| Sbjct 572489 GTCTTACCAGTCAAGGTCTTAACGAAAATCTGCATC 572524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002120842360