Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq147 147 3e-30 >seq147 Length=818043 Score = 147 bits (162), Expect = 3e-30 Identities = 717/1123 (64%), Gaps = 41/1123 (4%) Strand=Plus/Plus Query 116247 ATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGC 116306 ||| || | |||||||||||| | ||||||| | | ||||||| || ||| || Sbjct 277125 ATCAGCCAAACCTTGGACACCCAAAGCAATTGGTCTGTTCTTCATATTGGATCTTCTAGA 277184 Query 116307 GGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC 116363 ||| || || || || || || || || | || || | ||| |||||||||| Sbjct 277185 ---CTCAGGAACTGGGTAGAAGTTTCTGTCAATGATTCTGTTCAAGTTTCTGGTGACAAC 277241 Query 116364 CTTTGTGATTTCATGAAGCTTTTCGTAATCAAAAC---TGCGAGTCT-CTTCATTGACAT 116419 ||| | ||||| || | ||||||| | | | | || |||| | | || | || Sbjct 277242 CTTAGAAATTTCGTGCAACTTTTCGAAGTTGTACCAAGTG-GAGTTTTCATCGGTTTCA- 277299 Query 116420 ACTTAGGAAGG----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 116475 || | || || || || || |||| ||||| || | || || || | | Sbjct 277300 ACAAAAGATGGTAAAGCAATAGAAGCCAAGTTACAGACGGCAACTTCTTCAGGGTCTGAG 277359 Query 116476 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 116535 || || | |||||| |||||| || ||| || ||| | ||||||||||||||||| Sbjct 277360 TATTCAACAATTTCACAACACAAGTTAGAAGATTTGATGATACCCAAGTTCTTTTGATTG 277419 Query 116536 GACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGAC 116595 | ||| ||||||| || |||||||| | ||| | || || || || || ||||| | Sbjct 277420 GTCTTCTTGTTACAAGCGTCCTTGTACAACATGAAAGGAGTACCGGTTTCGGTTTGAGCT 277479 Query 116596 TTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTC 116654 | | ||| || | ||| | | || | |||| | || ||| || | | | Sbjct 277480 TCCAAAATTGCGTACCACAACTTCTG-GGCTTTGATGGT----TTGTCTACCTCTATTTT 277534 Query 116655 C----TCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTG 116710 | ||||| || ||| | | || || || ||||| | | || | | |||| Sbjct 277535 CACTTTCGTATTTCTCGTACAAAGTCTTGAATTCATCACCATAAACATCAGCTAAACCTG 277594 Query 116711 GTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 116770 | || | || |||| |||| | || ||| | |||| || ||||| | | ||| || | Sbjct 277595 GGGCTTCATTTGGAGAGAACAAAGTCCAGTCACCATTCTTTTCAACTCTTTCCATAAACA 277654 Query 116771 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGA 116829 ||||| ||||| | || | ||| | ||| | | | || |||||| | || ||| Sbjct 277655 AATCTGGAATCCACAAGGCTGGGAACAAATCTCTGGCTCTGAT-TTCTTCTTTTCCGTGA 277713 Query 116830 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 116889 || | | || | ||||| | ||||| | |||||| || || | ||||| || Sbjct 277714 TTCTTTCTGATGTCGATGAAGTCGAAAATATCGGAGTGCCATGGCTCTAAGTACAAGGCA 277773 Query 116890 ATTGACCC------CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAAT 116943 | | || |||| || ||| |||| || || || || || ||| ||| Sbjct 277774 AAAGCACCAGGTCTCTTGTTACCACCT---TGGTCGACGTATCTGGCAGTGTTGTTGAAT 277830 Query 116944 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTT 117002 || | | ||| ||||||||||| | || || || || || ||| || || Sbjct 277831 ACCCTGACCATAGGAATGATACCGTTGGAAGTACCGTTAGTACCAGCAATGTAAGCACCA 277890 Query 117003 GTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGC 117062 || ||| | || ||| ||||||| ||||||||| || || | ||| || || || Sbjct 277891 GTACT-TCTAATATTGTGAATGTGCAAACCAATACCACCAGCACTCTTGGAAATCAAGGC 277949 Query 117063 GCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAA 117122 || | | | || |||| || |||||||| |||||| |||| | || | | ||| Sbjct 277950 ACATGTCTTCAAGGTGTCGTAAATACCATCGATAGAGTCATCCTTCATGGCCACCAAGAA 278009 Query 117123 GCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGAT 117182 || |||||| || || ||||| |||||||| ||||| | |||||| | | |||| | Sbjct 278010 ACAAGACGACATCTGAGGACTTGGAGTACCAGCATTGAACAAGGTTGGAGACCCGTGAGT 278069 Query 117183 GAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTG 117242 ||| | ||| ||||| | | ||||||||| | ||| |||||| || ||||| Sbjct 278070 GAAGTATCTTTGAGACATGTGGTTGTAGGTCTCAATGACCTTTTCAATGTCGTCACCGTG 278129 Query 117243 AATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAG 117302 ||||| | | || | ||| | || || ||| ||| | || || |||| || | Sbjct 278130 GATACCAACAGCAACTCTCATGATCAAGTGTTGTGGTCTCTCGGCCACTTTACCGTCTAT 278189 Query 117303 CCTCTGGAGGTAAC-TCTTCTCCAAGGTCTTGAGACCAAAATA 117344 ||| | || |||| ||||||||||||| ||||||||| Sbjct 278190 TCTCAACAAATACGATCTT-TCCAAGGTCTTGAAACCAAAATA 278231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505735251560