Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq180 136 9e-27 seq158 114 3e-20 >seq180 Length=546618 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||| ||||| || |||||||| | |||||| ||||||||||| || || Sbjct 252595 TCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACC 252536 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||||| ||||||||||| | | || ||||| || ||||||||| Sbjct 252535 GTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTT 252476 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| || || || | |||||| | | ||| || ||||| ||||| Sbjct 252475 GTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGAT 252416 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | |||||| || |||||||| Sbjct 252415 GGTCTTACCAGTCAAAGTTTTAACGAAAATTTG 252383 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| || || || |||||||| | |||||| ||||||||||| || || Sbjct 253051 TCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACC 252992 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||||| ||||||||||| | | |||||||| || ||||||||| Sbjct 252991 ATCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGAATTCCTTCCTT 252932 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| || || || | |||||| | | ||| || ||||| ||||| Sbjct 252931 GTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGAT 252872 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | || || || |||||||| Sbjct 252871 GGTCTTACCGGTCAAGGTCTTGACGAAAATTTG 252839 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||| ||||| || |||||||| | |||||| ||||||||||| || || Sbjct 252823 TCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACC 252764 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||||| ||||||||||| | | || ||||| || ||||||||| Sbjct 252763 GTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTT 252704 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| || || || | |||||| | | ||| || ||||| ||||| Sbjct 252703 GTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGAT 252644 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | || || || |||||||| Sbjct 252643 GGTCTTACCGGTCAAGGTCTTGACGAAAATTTG 252611 Score = 95.1 bits (104), Expect = 3e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| | | ||||||||||| ||||| |||||||| || || |||||||| ||||||||| Sbjct 252501 AAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTACAACA 252560 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024 | || || || || ||||||||| | ||||||||| Sbjct 252561 TTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGA 252595 Score = 95.1 bits (104), Expect = 3e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| | | ||||||||||| ||||| |||||||| || || |||||||| ||||||||| Sbjct 252729 AAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTACAACA 252788 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024 | || || || || ||||||||| | ||||||||| Sbjct 252789 TTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGA 252823 Score = 95.1 bits (104), Expect = 3e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| | | ||||||||||| ||||| ||||||||||| || |||||||| ||||||||| Sbjct 252957 AAAGATTGATCTTCGCCGGTAAGCAATTGGAAGATGGTAGAACTTTGGCTGATTACAACA 253016 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024 | || || || ||||| |||||| | || |||||| Sbjct 253017 TTCAAAAGGAATCTACCCTTCACTTGGTCTTGAGA 253051 >seq158 Length=604990 Score = 114 bits (126), Expect = 3e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || |||||||||| |||||||||||||||||| ||||||||||||| || Sbjct 572320 GTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGCCAAAGTTCTTCCATCTTCCAATTG 572379 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || ||||| || | | || ||||| || ||||||||| || || ||||| Sbjct 572380 CTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTT 572439 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 || || || | |||||| | | || || ||||| || || |||||||| || Sbjct 572440 GGATTTGACATTATCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTACCAGT 572499 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | || || || ||||| || Sbjct 572500 CAAGGTCTTAACGAAAATCTG 572520 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| | | || ||||| || ||||| |||||||||||||| |||||||| || |||||| Sbjct 572402 AAAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGGCTGACTACAACA 572343 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024 |||| || || || ||||||||| | || || ||| Sbjct 572342 TCCAAAAGGAATCCACTCTTCACTTGGTGTTAAGA 572308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178918714957797