Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq180 205 2e-47 seq158 168 1e-36 seq147 86.0 1e-11 >seq180 Length=546618 Score = 205 bits (226), Expect = 2e-47 Identities = 179/223 (80%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | |||||||||||| || |||||||| |||||||| || | ||| Sbjct 252601 TCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAAAGT 252542 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | |||||||| |||||||| | || |||||||||||| ||||| || Sbjct 252541 TCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCC 252482 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || ||||| || ||||||||||| ||| ||| ||||| | Sbjct 252481 TTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAA 252422 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || | ||||| || ||||||||||| ||||| | ||||||| Sbjct 252421 AGTGATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCATT 252379 Score = 194 bits (214), Expect = 4e-44 Identities = 176/222 (79%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | |||||||||||| || |||||||| |||||||| || | ||| Sbjct 252829 TCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAAAGT 252770 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | |||||||| |||||||| | || |||||||||||| ||||| || Sbjct 252769 TCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCC 252710 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || ||||| || ||||||||||| ||| ||| ||||| | Sbjct 252709 TTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAA 252650 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || ||||| || || ||||| | |||||| Sbjct 252649 AGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252608 Score = 179 bits (198), Expect = 8e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | |||||| || || || |||||||| |||||||| || | ||| Sbjct 253057 TCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGCCAAAGT 252998 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||||| |||||||| | || ||| |||||||| ||||| || Sbjct 252997 TCTACCATCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGAATTCC 252938 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||||||||| || ||||| || ||||||||||| ||| ||| ||||| | Sbjct 252937 TTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAA 252878 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || ||||| || || ||||| | |||||| Sbjct 252877 AGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252836 >seq158 Length=604990 Score = 168 bits (186), Expect = 1e-36 Identities = 176/230 (77%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| || || | |||||||||||| || ||||| || ||||| || || | ||| Sbjct 572302 TCTCAATCTTAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGCCAAAGT 572361 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||||| ||||| || | || |||||||||||| ||||| || Sbjct 572362 TCTTCCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGAATTCC 572421 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| || || ||||| || ||||||||||| || || ||||| | Sbjct 572422 TTCCTTGTCTTGGATCTTGGATTTGACATTATCAATGGTGTCGGAGGACTCGACTTCCAA 572481 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTT 195148 ||||| ||||| || ||||| || || ||||| | ||||| | ||||| Sbjct 572482 GGTAATGGTCTTACCAGTCAAGGTCTTAACGAAAATCTGCATCT-TGGTT 572530 >seq147 Length=818043 Score = 86.0 bits (94), Expect = 1e-11 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 160571 ATGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTG 160630 || ||||||||||| | ||| ||| | |||| | | ||| | || ||| | ||||| Sbjct 277697 ATCAGAGCCAGAGATTTGTTCCCAGCCTTGTGGATTCCAGATTTGTTTATGGAAAGAGTT 277638 Query 160631 AAAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTT 160690 || | ||||| || |||| | |||| ||| |||||||| || || | | ||||||| Sbjct 277637 GAAAAGAATGGTGACTGGACTTTGTTCTCTCCAAATGAAGCCCCAGGTTTAGCTGATGTT 277578 Query 160691 TATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAA 160730 |||||| || ||| ||||| | || || | |||||||| Sbjct 277577 TATGGTGATGAATTCAAGACTTTGTACGAGAAATACGAAA 277538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109478884890497