Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq147 284 1e-71 seq103 242 4e-59 seq31 84.2 2e-11 >seq147 Length=818043 Score = 284 bits (314), Expect = 1e-71 Identities = 1161/1825 (64%), Gaps = 37/1825 (2%) Strand=Plus/Plus Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072 |||| ||||| |||||||||||||| | ||| |||| || ||||| ||||| Sbjct 276433 GTTCTCAAATAGTACATACCAGTCTTAAGACCCTTCTTCCAACCGTAGAAGTGCATTGAG 276492 Query 47073 GTTAATTTAGA-ATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131 || |||||| || | ||| || | | |||||||| | ||||| |||||||| Sbjct 276493 GTCAATTTACCCATTGTTGGGTCCTTGA-TGTGAATATTCAAGGATTGGGATTGATCAAT 276551 Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191 || ||| |||| || || ||||| || | ||| |||| | || |||||||| || Sbjct 276552 GAAAGCAGCTCTGTCGGCGGCCATGTCGATGATATGTTTTTGGGAGATTTCCCATACCGT 276611 Query 47192 TTTATAAATTTGTTTAATGTCTTCTGGGAGATTAGT---ATTTTGAATAGATCCTCCgtt 47248 ||||| | || || || ||||||| || || | |||||| || || ||| Sbjct 276612 CTTATACAAAGCCTTGATTTCATCTGGGATGTTGGTCAAACCTTGAATGGAACCGTTGTT 276671 Query 47249 ttctataattttgtttttta---attcatttgaccaaagttttcgttcagttaatgtttt 47305 | || || |||||||| | |||| || |||||| ||| || || Sbjct 276672 TGAAATGATGTTGTTTTTCATGGATTCGTT---CCAAAGACCCAAATCAACCAAATCCTT 276728 Query 47306 taaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATT 47365 || | | || ||||||||||| |||||||| || | ||||| | || || || Sbjct 276729 CAACAAGTATGGGTTAACAATTTGGAATTCTCCTGACAACACTCTTCTAGAGTACATGTT 276788 Query 47366 ACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGG 47425 | ||||||||||| | | |||| || || || || ||||||| ||| || || || || Sbjct 276789 AGAAGTATATGGTTCGAAACATTCGTTGTTACCCAAGATTTGAGAAGTAGAAGCAGTTGG 276848 Query 47426 CATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNG 47485 ||| | ||||| || || ||||||| |||| || |||| Sbjct 276849 CATAGGAGCAACCAACAATGAGTTTCTTAAACCATGTTGGGCCATCTTTTGCTTCAAAGT 276908 Query 47486 TTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTT 47545 | ||| ||||| | || | ||| ||||| ||||| ||||| | | |||| Sbjct 276909 ATCCCAGTCCCATAATTCGGTTGGCTTTCTGTTCCACAAATCGTATTGCAACAAACCTTG 276968 Query 47546 ACTTATCGGAGAACCATTATATGTTTTATAAGGACCGT--ATAGTTTAGCGAGTTCACAA 47603 | |||||||| | || | || |||||||| | ||| | || | |||| | Sbjct 276969 AGAAGCTGGAGAACCTTCGTAGGATTCGTAAGGACCTTCGATAACT--GCCAATTCAATA 277026 Query 47604 CTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTG-C 47662 ||||| | |||| | || || ||||| || |||| || |||| |||||||| | Sbjct 277027 GAGGCTTCAACAGCACCGTGGTAGATGGTTTCGAAGATTTGAATATTTA-ATTCCTTGGC 277085 Query 47663 TTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACC 47722 |||| || || || || | || ||||| ||||| ||||| ||||| Sbjct 277086 TTCTTGAGAGTCGAATGGTAATCTCAAAGCCATGAAAGTATCAGCCAAACCTTGGACACC 277145 Query 47723 AATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTT 47782 | | |||||||||| | | |||| || || || || | ||| || ||| Sbjct 277146 CAAAGCAATTGGTCTGTTCTTCATATTGGATCTTCTAGACTCAGGAACTGGGTAGAAGTT 277205 Query 47783 TATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATT 47842 | | || || ||| | || | |||||| || || | Sbjct 277206 TCTGTCAATGATTCTGTTCAAGTTTCTGGTGACAACCTTAGAAATTTCGTGCAACTTTTC 277265 Query 47843 AAAAT-----CAA----ACTTGTTAT---TTATAACAAACC-TATTAAGTGCTATAGATG 47889 || | ||| | || | || || |||||| | ||| || ||||| | Sbjct 277266 GAAGTTGTACCAAGTGGAGTTTTCATCGGTTTCAACAAAAGATGGTAAA-GCAATAGAAG 277324 Query 47890 CTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGAT 47949 | | ||||| || || || || | || | | |||| | |||||| ||| | | Sbjct 277325 CCAAGTTACAGACGGCAACTTCTTCAGGGTCTGAGTATTCAACAATTTCACAACACAAGT 277384 Query 47950 TACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGT 48009 || | ||||||| ||||||| || | ||||| | |||||||| |||||||||| Sbjct 277385 TAGAAGATTTGATGATACCCAAGTTCTTTTGATTGGTCTTCTTGTTACAAGCGTCCTTGT 277444 Query 48010 AAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCC 48069 | | ||| ||||| || || ||||| | |||| ||| | || | | ||| | | | | Sbjct 277445 ACAACATGAAAGGAGTACCGGTTTCGGTTTGAGCTTCCAAAATTGCGTACCACA-ACTTC 277503 Query 48070 TAGCCTTT-ATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCA 48128 | | |||| || |||| || |||| ||| ||||||||| || || ||| Sbjct 277504 TGGGCTTTGATGGTTTGTCTACCTCTATTTTCACTTTCGTATTTCTCGTACAAAGTCTTG 277563 Query 48129 AATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAA 48188 |||||||| ||||| |||| | |||| || || |||||| ||| | | ||| | ||| Sbjct 277564 AATTCATCACCATAAACATCAGCTAAACCTGGGGCTTCATTTGGAGAGAACAAAGTCCAG 277623 Query 48189 TCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAA 48248 || ||| |||| ||||| |||||| | |||||| ||||| | ||| || ||| Sbjct 277624 TCACCATTCTTTTCAACTCTTTCCATAAACAAATCTGGAATCCACAAGGCTGGGAACAAA 277683 Query 48249 TCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATA 48308 || || | ||| | |||||| || || |||| || | | || | ||||| | ||| Sbjct 277684 TCTCTGGCTCTGATTTCTTCTTTTCCGTGATTCTTTCTGATGTCGATGAAGTCGAAAATA 277743 Query 48309 TCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGA 48368 || | |||||||| ||||| || | || | |||| |||| || ||||| ||||| Sbjct 277744 TCGGAGTGCCATGGCTCTAAGTACAAGGCAAAAGCACCAGGTCTCTTGTTACCACCTTGG 277803 Query 48369 TCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATA 48428 || | ||||||||||| ||||| | || || | ||| || | ||||| || || || Sbjct 277804 TCGACGTATCTGGCAGTGTTGTTGAATACCCTGACCATAGGAATGATACCGTTGGAAGTA 277863 Query 48429 CCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCTAT 48487 || || || || | ||| ||| ||| || ||| ||||| ||| || || ||| || Sbjct 277864 CCGTTAGTACCAGCAATGTAAGCACCAGTACTTCTAATATTGTGAATGTGCAA-ACCAAT 277922 Query 48488 ACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTAT 48547 |||||| || | || || || | ||||| || | ||| || ||||| || || || Sbjct 277923 ACCACCAGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTGTCGTAAATACCATCGAT 277982 Query 48548 ACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGA 48607 | ||||| |||| | | |||||| ||||| || ||| ||| || | Sbjct 277983 AGAGTCATCCTTCATGGCCACCAAGAAACAAGACGACATCTGAGGACTTGGAGTACCAGC 278042 Query 48608 ATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTC 48667 ||| || || |||||||| | ||| | || || | | || | || || || || Sbjct 278043 ATTGAACAAGGTTGGAGACCCGTGAGTGAAGTATCTTTGAGACATGTGGTTGTAGGTCTC 278102 Query 48668 AATAACAGAATCTATATC-CCATTGATGTATACCTATAGATACACGCATTAACATATATT 48726 ||| || || || || || | || ||||| | || || | ||| | || | || Sbjct 278103 AATGACCTTTTCAATGTCGTCACCG-TGGATACCAACAGCAACTCTCATGATCAAGTGTT 278161 Query 48727 GAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAA 48786 | ||||| || | | ||| | |||| |||| | ||| ||| ||||||| || || | Sbjct 278162 GTGGTCTCTCGGCCACTTTACCGTCTATTCTCAACAAATACGATCTTTCCAAGGTCTTGA 278221 Query 48787 AACCAAAATAGTTGTATGAAAAGTC 48811 |||||||||| ||||| |||||| Sbjct 278222 AACCAAAATAATTGTAGTTAAAGTC 278246 >seq103 Length=1665694 Score = 242 bits (268), Expect = 4e-59 Identities = 593/894 (66%), Gaps = 5/894 (1%) Strand=Plus/Minus Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 ||||| || || |||||| |||||||||||||| || || || | || || || | Sbjct 215346 TTTTGGTAATCACTAACTCTCTTTTCAAAGAAATTGGTCTTACCGGCCAAGGAGATGTTT 215287 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 ||||| || || || || || | |||| || | || | | |||| | | || | Sbjct 215286 TCCATGAAGTCGAAGGGGTTGGTGGCATTGTAAACCTTCTCGTTACCTAGAGCAACTAAT 215227 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 | |||||| || ||||| | | ||| ||||| | ||| ||||| || | || Sbjct 215226 AATCTATCAGCGACAAACTCCACGTATTGACACATCAACTTACAGTTCATACCCAACAAA 215167 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909 | | || | ||||| || | |||| | ||| ||| || || || | || || Sbjct 215166 CTGATTGGCAAAGCATCAGTGAAGTATTCCTTTTCAATAGCAACAGCTTCAGTGATGATT 215107 Query 18910 GATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAA 18969 | | || | ||| | || || | | | ||| || | | ||||||||| Sbjct 215106 TGTTCGACGATTTCTGGGTCTGGTCTGTTTTGCAAATGGGAGAATAAGAGACATGCAAAG 215047 Query 18970 TCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATC 19029 || ||| | || |||||||| | ||||||||||| || || || ||||| ||||| Sbjct 215046 TCTGTATGCAAACCTTCGTCTCTGCAAATCAATTCATTGGAGAAAGTCAAACCTGGCATT 214987 Query 19030 AGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCT 19089 | |||||||| || |||||||| ||||||||||| || ||| |||||| |||||||| Sbjct 214986 AAACCTCTTTTCTTCAACCAGAAAATAGAAGCAAAAGAACCACTAAAGAAAATACCTTCA 214927 Query 19090 ACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTC 19149 || || || ||||| |||| |||||| || | |||||| |||| || ||||||| || Sbjct 214926 ACGGCAGCGAAAGCGACTAATCTTTCACCGAACAAAGCATCGTTATCATTAATCCATCTC 214867 Query 19150 AGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATAC 19209 | ||||| ||||| || | || | ||| || || || |||| || || | | | Sbjct 214866 AAAGCCCAGTCAGCTTTTCTCTTAATTTGTGGAATGGTTTCGATAGCGTTGAACA-AGAA 214808 Query 19210 ATACGC-TCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATG 19268 | || || | || ||| || | |||| || ||||| ||| ||| |||| || || Sbjct 214807 GTCAGCTTCCTTTGGATCCTTGATGTATGAGTCGATCAACAAAGAGTAGGTTTCGGAGTG 214748 Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328 || ||||| || || || || ||||| ||||| | ||||| | | || ||||| Sbjct 214747 GATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTTCAGGCACTTGAACTTC 214688 Query 19329 ACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGC 19388 | |||| |||| ||||| |||||||| || || |||||| || || || || || Sbjct 214687 GGCAGAAAAGTTTTCAACCAAGTTTTCATTGACGATACCATCAGAGGCAGCGAAGAAAGC 214628 Query 19389 TAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAA--TG-TATTCCAATCATTAAT 19445 || | || |||| |||| | | | || || | ||||| |||| | | Sbjct 214627 CAAAATTCTGGAAACAAAAAACCTTTCGTTATCGTTCAACTTGTTGTTCCAGTCATGAGT 214568 Query 19446 ATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACAT 19505 ||||||| || || | ||| ||| | ||||||||||| || || || ||||| ||||| Sbjct 214567 ATCTTTACCCAAGTCGATTTCCTCAGCAGTCCAAAAAGAGGCTTCAGCCTTTTTGTACAT 214508 Query 19506 GTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTC 19559 | ||| || ||| | || | || || || | || ||||| || | ||||| Sbjct 214507 TTGCCAAATCTCATGGTACTTGATTGGGAACAAGACGAATCTCTTGGTGTTTTC 214454 >seq31 Length=351742 Score = 84.2 bits (92), Expect = 2e-11 Identities = 311/483 (64%), Gaps = 8/483 (2%) Strand=Plus/Minus Query 47934 ATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTG 47993 |||||| ||| ||||| | | ||||| || ||||| | ||| || || | Sbjct 239910 ATTTCACAACAGAGATTTGAAGACTTGATGGTTCCCAAGTGTTGGTGGTTTGACTTCATA 239851 Query 47994 TTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATA 48053 ||||| || |||||||| | |||| | || |||||||| ||||||| |||| ||| Sbjct 239850 TTACAAGCATCCTTGTACAACATATAGGGACCCCCAGTTTCGGTCTGAGACTCAAGTATA 239791 Query 48054 GATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTA 48113 | ||| | | ||||| | ||| | ||| | || | ||||| Sbjct 239790 CTCTGCCACAACTTTTGGGCCTTAACAACCTTTGCAGCCCTTCCTTCTTTCTCGTACCGT 239731 Query 48114 GTATATAACTTCTCAAATTCATCCCCATACACATTATCTAAC---CCAGGACATTCATTA 48170 ||| || | | ||| || || || || ||| |||| || || ||||| |||| Sbjct 239730 TCATACAAGATATTAAACTCGTCTCCGTA-ACA--ATCTGACAAGCCTGGACACTCATCC 239674 Query 48171 GGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATC 48230 || | || |||| || || | || ||| || | ||| |||| || || ||| Sbjct 239673 GGGGTAAATAAACACCAGTCTTCGTTATCTTTGACCTTCTGCATGAATAAGTCGGGAATC 239614 Query 48231 CAAAGAGCTATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAG 48289 || || | ||| |||||||| || || || | ||||| || || ||| | | | Sbjct 239613 CAGAGTCC-ATAGAATAAATCTCTTGTCCTCAACTCTTCCTTTCCGTAGTTCTTCCTCAA 239555 Query 48290 TTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGG 48349 ||||||| || | | |||||||||||| || || | ||||| || | |||| || Sbjct 239554 ATCAAGAACATCAAACACATCAGCATGCCACGGCTCAATGTATATAGCAAAAGCACCGGG 239495 Query 48350 TCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGG 48409 || |||||| || |||||||| | ||||| || |||| || | ||||| | |||||| Sbjct 239494 TCTTTTATTTCCACCTTGATCAACGTATCTAGCTGTATCATTGAACACTCTAAGCATTGG 239435 Query 48410 GAC 48412 || Sbjct 239434 CAC 239432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107457965240