Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq180 109 4e-19 seq158 96.9 3e-15 >seq180 Length=546618 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| || || ||| || |||||||| |||||||||| | | ||| | |||| Sbjct 252592 CAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACCGTC 252533 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| ||||||||||| || |||| || ||||| || | |||| || |||||||| Sbjct 252532 TTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTC 252473 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||| ||| ||| | | | || || | || || |||| || || || Sbjct 252472 TTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGATGGT 252413 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||||||||| || ||||| ||||| Sbjct 252412 CTTACCAGTCAAAGTTTTAACGAAAATTTGCAT 252380 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| || || ||| || |||||||| |||||||||| | | ||| | |||| Sbjct 252820 CAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACCGTC 252761 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| ||||||||||| || |||| || ||||| || | |||| || |||||||| Sbjct 252760 TTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTC 252701 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||| ||| ||| | | | || || | || || |||| || || || Sbjct 252700 TTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGATGGT 252641 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || || || ||||| ||||| Sbjct 252640 CTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252608 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| || || || || |||||||| |||||||||| | | ||| | | || Sbjct 253048 CAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACCATC 252989 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| ||||||||||| || |||| || || || || | |||| || |||||||| Sbjct 252988 TTCCAATTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGAATTCCTTCCTTGTC 252929 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||| ||| ||| | | | || || | || || |||| || || || Sbjct 252928 TTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGATGGT 252869 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || || || ||||| ||||| Sbjct 252868 CTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252836 >seq158 Length=604990 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614 |||||||| || || ||| || ||||| || ||||| |||| | | ||| | || Sbjct 572312 AACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGCCAAAGTTCTTCCATCT 572371 Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCG 48674 ||||| |||||||| || || |||| || ||||| || | |||| || |||||||| Sbjct 572372 TCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTCT 572431 Query 48675 CTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTT 48734 ||||| ||| ||| | | | | || || | ||| || |||| ||||| || Sbjct 572432 TGGATCTTGGATTTGACATTATCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTC 572491 Query 48735 TTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || || ||||| || || || |||||||||||| || Sbjct 572492 TTACCAGTCAAGGTCTTAACGAAAATCTGCATCTTG 572527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380936713248693