Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq147 206 1e-48 seq31 150 9e-32 >seq147 Length=818043 Score = 206 bits (228), Expect = 1e-48 Identities = 253/343 (74%), Gaps = 2/343 (1%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||||||| |||| ||| ||| ||| |||| | |||||| | |||||||| |||||||| Sbjct 277602 ATTTGGAGAGAACAAAGTCCAGTCACCATTCTTTTCAACTCTTTCCATAAACAAATCTGG 277661 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 |||||||| || || |||||||| ||||| |||||||||||||||||||||||| | Sbjct 277662 AATCCACAAGGCTGGGAACAAATCTCTGGCTCTGATTTCTTCTTTTCCGTGATTCTTTCT 277721 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 | || | ||| || |||||||| ||||||||||| ||||| || | |||||| ||| Sbjct 277722 GATGTCGATGAAGTCGAAAATATCGGAGTGCCATGGCTCTAAGTACAAGGCAAAAGCACC 277781 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 ||| || |||||||| || |||||||| ||||| | ||||| || | | ||| Sbjct 277782 AGGTCTCTTGTTACCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAATACCCTGACCAT 277841 Query 26128 TGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186 |||| | || | |||| || | ||||| || | | ||| | | || || ||||| Sbjct 277842 AGGAA-TGATACCGTTGGAAGTACCGTTAGTACCAGCAATGTAAGCACCAGTACTTCTAA 277900 Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229 ||| |||| || | ||| || |||||||| | || ||||| Sbjct 277901 TATTGTGAATGTGCAAACCAATACCACCAGCACTCTTGGAAAT 277943 Score = 107 bits (118), Expect = 1e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075 |||||||| ||||| |||||||| | | ||| ||||| ||||||| |||||||| Sbjct 276754 AATTCTCCTGACAACACTCTTCTAGAGTACATGTTAGAAGTATATGGTTCGAAACATTCG 276813 Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135 || || || ||||||||||||||||| || |||||||| || | || | || ||| Sbjct 276814 TTGTTACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATAGGAGCAACCAACAATGAGTTT 276873 Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179 || ||||||| || | |||| ||| || || ||||||| || Sbjct 276874 CTTAAACCATGTTGGGCCATCTTTTGCTTCAAAGTATCCCAGTC 276917 >seq31 Length=351742 Score = 150 bits (166), Expect = 9e-32 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 25925 ACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATT 25984 || |||| ||| ||||| || |||||||| | | |||| ||||||||||| | |||| Sbjct 239640 ACCTTCTGCATGAATAAGTCGGGAATCCAGAGTCCATAGAATAAATCTCTTGTCCTCAAC 239581 Query 25985 TCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAA-ATCAAAAATATCTGAGTGCCATGG 26043 ||||| ||||||| ||||| | | ||| ||||| |||||| | ||| | ||||| || Sbjct 239580 TCTTCCTTTCCGTAGTTCTTCCTCAAATC-AAGAACATCAAACACATCAGCATGCCACGG 239522 Query 26044 TTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGC 26103 || | || ||||||||| ||| |||||| |||||||||||| |||||||| || Sbjct 239521 CTCAATGTATATAGCAAAAGCACCGGGTCTTTTATTTCCACCTTGATCAACGTATCTAGC 239462 Query 26104 AGTTTCATTGAAAACTTTCAACATTGGAACTAATCCA 26140 || |||||||| ||| | | |||||| || |||||| Sbjct 239461 TGTATCATTGAACACTCTAAGCATTGGCACCAATCCA 239425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039410970325