Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017-
04-25] 191 sequences; 10,912,061 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq147 206 1e-48
seq31 150 9e-32
>seq147
Length=818043
Score = 206 bits (228), Expect = 1e-48
Identities = 253/343 (74%), Gaps = 2/343 (1%)
Strand=Plus/Plus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
||||||| |||| ||| ||| ||| |||| | |||||| | |||||||| ||||||||
Sbjct 277602 ATTTGGAGAGAACAAAGTCCAGTCACCATTCTTTTCAACTCTTTCCATAAACAAATCTGG 277661
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007
|||||||| || || |||||||| ||||| |||||||||||||||||||||||| |
Sbjct 277662 AATCCACAAGGCTGGGAACAAATCTCTGGCTCTGATTTCTTCTTTTCCGTGATTCTTTCT 277721
Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067
| || | ||| || |||||||| ||||||||||| ||||| || | |||||| |||
Sbjct 277722 GATGTCGATGAAGTCGAAAATATCGGAGTGCCATGGCTCTAAGTACAAGGCAAAAGCACC 277781
Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127
||| || |||||||| || |||||||| ||||| | ||||| || | | |||
Sbjct 277782 AGGTCTCTTGTTACCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAATACCCTGACCAT 277841
Query 26128 TGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186
|||| | || | |||| || | ||||| || | | ||| | | || || |||||
Sbjct 277842 AGGAA-TGATACCGTTGGAAGTACCGTTAGTACCAGCAATGTAAGCACCAGTACTTCTAA 277900
Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229
||| |||| || | ||| || |||||||| | || |||||
Sbjct 277901 TATTGTGAATGTGCAAACCAATACCACCAGCACTCTTGGAAAT 277943
Score = 107 bits (118), Expect = 1e-18
Identities = 122/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075
|||||||| ||||| |||||||| | | ||| ||||| ||||||| ||||||||
Sbjct 276754 AATTCTCCTGACAACACTCTTCTAGAGTACATGTTAGAAGTATATGGTTCGAAACATTCG 276813
Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135
|| || || ||||||||||||||||| || |||||||| || | || | || |||
Sbjct 276814 TTGTTACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATAGGAGCAACCAACAATGAGTTT 276873
Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179
|| ||||||| || | |||| ||| || || ||||||| ||
Sbjct 276874 CTTAAACCATGTTGGGCCATCTTTTGCTTCAAAGTATCCCAGTC 276917
>seq31
Length=351742
Score = 150 bits (166), Expect = 9e-32
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 25925 ACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATT 25984
|| |||| ||| ||||| || |||||||| | | |||| ||||||||||| | ||||
Sbjct 239640 ACCTTCTGCATGAATAAGTCGGGAATCCAGAGTCCATAGAATAAATCTCTTGTCCTCAAC 239581
Query 25985 TCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAA-ATCAAAAATATCTGAGTGCCATGG 26043
||||| ||||||| ||||| | | ||| ||||| |||||| | ||| | ||||| ||
Sbjct 239580 TCTTCCTTTCCGTAGTTCTTCCTCAAATC-AAGAACATCAAACACATCAGCATGCCACGG 239522
Query 26044 TTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGC 26103
|| | || ||||||||| ||| |||||| |||||||||||| |||||||| ||
Sbjct 239521 CTCAATGTATATAGCAAAAGCACCGGGTCTTTTATTTCCACCTTGATCAACGTATCTAGC 239462
Query 26104 AGTTTCATTGAAAACTTTCAACATTGGAACTAATCCA 26140
|| |||||||| ||| | | |||||| || ||||||
Sbjct 239461 TGTATCATTGAACACTCTAAGCATTGGCACCAATCCA 239425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039410970325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |