Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq103 201 2e-46 seq180 132 7e-26 seq158 132 7e-26 >seq103 Length=1665694 Score = 201 bits (222), Expect = 2e-46 Identities = 562/858 (66%), Gaps = 28/858 (3%) Strand=Plus/Minus Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920 || |||| ||| || | ||| | || || |||||||| ||||| || |||| || || Sbjct 215349 GCCTTTTGGTAATCACTAACTCTCTTTTCAAAGAAATTGGTCTTACCGGCCAAGGAGATG 215290 Query 17921 AAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTAT 17980 | ||| || || || || || |||| || ||| || || | || | | Sbjct 215289 TTTTCCATGAAGTCGAAGGGGTTGGTGGCATTGTAAACCTTCTCGTTACCTAGAGCAACT 215230 Query 17981 AATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGT 18040 ||||||||||| || ||||| || || ||||| ||||||| | || |||||||| | Sbjct 215229 AATAATCTATCAGCGACAAACTCCACGTATTGACACATCAACTTACAGTTCATACCCAAC 215170 Query 18041 AGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTATT 18100 | |||| || | ||||||| | | |||| || || || |||||| || | || Sbjct 215169 AAACTGATTGGCAAAGCATCAGTGAAGTATTCCTTTTCAATAGCAACAGCTTCAGTGATG 215110 Query 18101 ATGTTTATTACC----CTAGATTTTGGCAATTTATTAATTATGTGATTATAATATAATAA 18156 || | | || || | | | | | ||| || | | || |||| | Sbjct 215109 ATTTGTTCGACGATTTCTGGGTCTGGTCTGTTTTGCAAATGGGAGA-------ATAAGAG 215057 Query 18157 ACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAA 18216 ||| ||||| || || || |||||||| |||||| | || ||||| || || || || Sbjct 215056 ACATGCAAAGTCTGTATGCAAACCTTCGTCTCTGCAAATCAATTCATTGGAGAAAGTCAA 214997 Query 18217 CCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAA 18276 || ||||||| ||||||||| || | ||| || || || || ||| || | |||||| Sbjct 214996 ACCTGGCATTAAACCTCTTTTCTTCAACCAGAAAATAGAAGCAAAAGAACCACTAAAGAA 214937 Query 18277 TATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAA-ACTGTAT--TTATTGCT 18333 ||||| |||||| ||||| || | |||||||||| | || | | || |||| Sbjct 214936 AATACCTTCAACGGCAGCGAAAGCGACTAATCTTTCACCGAACAAAGCATCGTTAT---- 214881 Query 18334 CAGTA-TCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAG 18392 || || ||||| | ||||| || ||| || || || | || |||| Sbjct 214880 CATTAATCCATCTCAAAGCCCAGTCAGCTTTTCTCTTAATTTGTGGAATGGTTTCGATAG 214821 Query 18393 CATTAAACAAA---TCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAG 18449 | || ||||| ||| ||| ||||||| || || || || | |||||| ||||||| Sbjct 214820 CGTTGAACAAGAAGTCAGCTTC--CTTTGGA-TCCTTGATGTATGAGTCGATCAACAAAG 214764 Query 18450 AATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCT 18509 | || |||| || || ||| ||||||| || || |||| || || | | || | Sbjct 214763 AGTAGGTTTCGGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTGGCTT 214704 Query 18510 CGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAG 18569 | || ||||| ||| | |||| |||| ||||| || ||||| || ||||| |||| Sbjct 214703 CAGGCACTTGAACTTCGGCAGAAAAGTTTTCAACCAAGTTTTCATTGACGATACCATCAG 214644 Query 18570 CAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATTGT 18629 | ||||| || ||||||| || ||| |||| ||||| || | |||| Sbjct 214643 AGGCAGCGAAGAAAGCCAAAATTCTGGAAACAAAAAACCTTTCGTTATCGTTCAACTTGT 214584 Query 18630 T---CCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATT 18686 | ||| |||| ||||||| | || | ||| || | ||||||||||| | || Sbjct 214583 TGTTCCAGTCATGAGTATCTTTACCCAAGTCGATTTCCTCAGCAGTCCAAAAAGAGGCTT 214524 Query 18687 CGGCCTGTTTGTACATTT 18704 | |||| ||||||||||| Sbjct 214523 CAGCCTTTTTGTACATTT 214506 >seq180 Length=546618 Score = 132 bits (146), Expect = 7e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| || ||||||| |||||||| || || || || || ||||| ||| ||| Sbjct 252379 AATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTC 252438 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | ||| || || ||| || || ||||| || ||||| || || ||||| || Sbjct 252439 CGACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCA 252498 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||||||||||| | ||||||||||| | ||||| |||||||| | ||||| || Sbjct 252499 ACAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTACAA 252558 Query 156002 TATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| || | || ||||| || || || ||||| ||||| ||| Sbjct 252559 CAT-TCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGT 252607 Score = 118 bits (130), Expect = 2e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || ||||| || || || || || || ||||| ||| ||| Sbjct 252608 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252667 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || ||| || || ||||| || ||||| || || ||||| ||| Sbjct 252668 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAA 252727 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | ||||||||||| | ||||| |||||||| | ||||| || Sbjct 252728 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTACAAC 252787 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| || | || ||||| || || || ||||| ||||| ||| Sbjct 252788 AT-TCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGT 252835 Score = 116 bits (128), Expect = 5e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || ||||| || || || || || || ||||| ||| ||| Sbjct 252836 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252895 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || ||| || || ||||| || ||||| || || ||||| || Sbjct 252896 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAG 252955 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | ||||||||||| | |||||| |||||||| | ||||| || Sbjct 252956 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGATGGTAGAACTTTGGCTGATTACAAC 253015 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || || ||| || | || ||||| || || || ||||| ||||| || Sbjct 253016 AT-TCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 253062 >seq158 Length=604990 Score = 132 bits (146), Expect = 7e-26 Identities = 171/234 (73%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || ||||| || || |||| || |||||||| || || ||||| || |||||||| Sbjct 572526 AAGATGCAGATTTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGAGTCC 572467 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | ||| || || ||| || || ||||| || ||||| || || ||||| Sbjct 572466 TCCGACACCATTGATAATGTCAAATCCAAGATCCAAGACAAGGAAGGAATTCCACCAGAC 572407 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||||||||||||| || |||||||| | |||||| |||||||| | || || Sbjct 572406 CAACAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGGCTGACTAC 572347 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 || || ||||| || | || ||||| || ||||||||||| ||||| |||| Sbjct 572346 AACAT--CCAAAAGGAATCCACTCTTCACTTGGTGTTAAGATTGAGAGGTGGTG 572295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731870252655600