Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq180 132 9e-26 seq103 132 9e-26 >seq180 Length=546618 Score = 132 bits (146), Expect = 9e-26 Identities = 170/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATC 192365 ||||||||||| | | || || || || | ||| | | |||| || || || ||||| Sbjct 252609 ATACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGA-ATGTTGTAATC 252551 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || || |||| | || |||||||| ||||| || ||||| ||||| ||||| || || Sbjct 252550 AGCCAAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGG 252491 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| |||||||| || ||||| || || ||| ||||| || | || || ||||| Sbjct 252490 TGGAATTCCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTC 252431 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| | ||| ||||| |||||||| || ||||||| || || |||||| Sbjct 252430 AACTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCATT 252379 Score = 116 bits (128), Expect = 7e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATC 192365 ||||||||||| | | || || || || | ||| | | |||| || || || ||||| Sbjct 252837 ATACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGA-ATGTTGTAATC 252779 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || || |||| | || |||||||| ||||| || ||||| ||||| ||||| || || Sbjct 252778 AGCCAAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGG 252719 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| |||||||| || ||||| || || ||| ||||| || | || || ||||| Sbjct 252718 TGGAATTCCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTC 252659 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | ||| ||||| ||||| || || || || | || || ||||| Sbjct 252658 AACTTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252608 >seq103 Length=1665694 Score = 132 bits (146), Expect = 9e-26 Identities = 289/426 (68%), Gaps = 9/426 (2%) Strand=Plus/Minus Query 49646 TAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAA 49705 |||||||||||| || ||||| || || ||||| |||| || | ||| ||||||||||| Sbjct 215230 TAATAATCTATCAGCGACAAACTCCACGTATTGACACATCAACTTACAGTTCATACCCAA 215171 Query 49706 TAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaat 49765 || | | ||| || |||||| | |||| ||||| || | ||||||| | || Sbjct 215170 CAAACTGATTGGCAAAGCATCAGTGAAGTATTCCTTTTCAATAGCAACAGCTTCAGTGAT 215111 Query 49766 tatcataattatattattttttgataatttatatttaatatgattcgcatatattaaACA 49825 || | || | |||| | | | | | ||| | || | ||| | ||| Sbjct 215110 GAT--TTGTTCGACGATTTCTGGGTCTGGTCTGTTTTGCAA-ATGGGAGAATAAGAGACA 215054 Query 49826 TGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 49885 |||||| || ||||| ||||| ||||| || | || |||||||| ||||| || || Sbjct 215053 TGCAAAGTCTGTATGCAAACCTTCGTCTCTGCAAATCAATTCATTGGAGAAAGTCAAACC 214994 Query 49886 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 49945 ||||||||| ||||| || || | ||| || || || |||||| || | |||||| || Sbjct 214993 TGGCATTAAACCTCTTTTCTTCAACCAGAAAATAGAAGCAAAAGAACCACTAAAGAAAAT 214934 Query 49946 ACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAAC-ATTAAT--TTATCATCTAA 50002 ||| || || || || || | || |||| | || ||| | || ||||||| || Sbjct 214933 ACCTTCAACGGCAGCGAAAGCGACTAATCTTTCACCGAACAAAGCATCGTTATCAT-TA- 214876 Query 50003 TATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTT 50062 ||||| | | |||||| || |||||| | || || || || |||| ||||| || Sbjct 214875 -ATCCATCTCAAAGCCCAGTCAGCTTTTCTCTTAATTTGTGGAATGGTTTCGATAGCGTT 214817 Query 50063 AAATAA 50068 || || Sbjct 214816 GAACAA 214811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984477590792850