Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017-
04-25] 191 sequences; 10,912,061 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq180 147 4e-30
seq103 143 5e-29
>seq180
Length=546618
Score = 147 bits (162), Expect = 4e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || || || | ||| | || || ||| || |||||
Sbjct 252609 ATACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCA 252550
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| |||| || |||| |||||||| ||||| || || || ||||| |||||||| |||
Sbjct 252549 GCCAAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGT 252490
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| |||||||| || ||||| || || ||| ||||| || || || || |||||
Sbjct 252489 GGAATTCCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCA 252430
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | ||| ||||| |||||||| || ||||||| ||| || ||||||
Sbjct 252429 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCATT 252379
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || || || | ||| | || || ||| || |||||
Sbjct 252837 ATACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCA 252778
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| |||| || |||| |||||||| ||||| || || || ||||| |||||||| |||
Sbjct 252777 GCCAAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGT 252718
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| |||||||| || ||||| || || ||| ||||| || || || || |||||
Sbjct 252717 GGAATTCCTTCCTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCA 252658
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | ||| ||||| ||||| || || || || | ||| || |||||
Sbjct 252657 ACTTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252608
>seq103
Length=1665694
Score = 143 bits (158), Expect = 5e-29
Identities = 366/547 (67%), Gaps = 19/547 (3%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| ||| |||| | ||||| || || || || || || | || || ||
Sbjct 215346 TTTTGGTAATCACTAACTCTCTTTTCAAAGAAATTGGTCTTACCGGCCAAGGAGATGTTT 215287
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATAA 38950
| ||| || || || || || ||| ||| ||| || || || | | | || |||
Sbjct 215286 TCCATGAAGTCGAAGGGGTTGGTGGCATTGTAAACCTTCTCGT-TACCTAGAGCAACTAA 215228
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
||||||||| || ||||| || || ||||| |||| || | ||| ||||||||||| ||
Sbjct 215227 TAATCTATCAGCGACAAACTCCACGTATTGACACATCAACTTACAGTTCATACCCAACAA 215168
Query 39011 TTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattat 39070
| | ||| || |||||| | |||| ||||| || | ||||||| | || ||
Sbjct 215167 ACTGATTGGCAAAGCATCAGTGAAGTATTCCTTTTCAATAGCAACAGCTTCAGTGATGAT 215108
Query 39071 cataattatattattttttgataatttatattt----aatatgattcgcatataGTAAAC 39126
| || | |||| | | | | | ||| ||| || | ||| || | ||
Sbjct 215107 --TTGTTCGACGATTTCTGGGTCTGGTCTGTTTTGCAAATGGGA---GAATA-AG-AGAC 215055
Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186
||||||| || ||||| ||||||||||| || | || |||||||| ||||| || |
Sbjct 215054 ATGCAAAGTCTGTATGCAAACCTTCGTCTCTGCAAATCAATTCATTGGAGAAAGTCAAAC 214995
Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246
|||||||||| ||||| || || | ||| || || || |||||| || | |||||| |
Sbjct 214994 CTGGCATTAAACCTCTTTTCTTCAACCAGAAAATAGAAGCAAAAGAACCACTAAAGAAAA 214935
Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAAC-ATTAAT--TTATCATCTA 39303
|||| || || || || || | || |||| | || ||| | || |||||||
Sbjct 214934 TACCTTCAACGGCAGCGAAAGCGACTAATCTTTCACCGAACAAAGCATCGTTATCAT--- 214878
Query 39304 AAATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTT 39363
|||||| | | ||||| || |||||| | || || || || |||| ||||| |
Sbjct 214877 TAATCCATCTCAAAGCCCAGTCAGCTTTTCTCTTAATTTGTGGAATGGTTTCGATAGCGT 214818
Query 39364 TAAATAA 39370
| || ||
Sbjct 214817 TGAACAA 214811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905133838987800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |