Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq147 111 5e-19 seq125 104 7e-17 >seq147 Length=818043 Score = 111 bits (122), Expect = 5e-19 Identities = 602/953 (63%), Gaps = 17/953 (2%) Strand=Plus/Plus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646 ||||||| |||| ||||| || ||| || | ||| |||||| ||||| |||| Sbjct 277316 CAATAGAAGCCAAGTTACAGACGGCAACTTCTTCAGGGTCTGAGTATTCAACAATTTCAC 277375 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 | |||| ||||||| |||||| | || || ||||| || || | || ||||||||| Sbjct 277376 AACACAAGTTAGAAGATTTGATGATACCCAAGTTCTTTTGATTGGTCTTCTTGTTACAAG 277435 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766 | |||||||| | ||| | || || || || || | || || |||| ||| || Sbjct 277436 CGTCCTTGTACAACATGAAAGGAGTACCGGTTTCGGTTTGAGCTTCCAAAATTGCGTACC 277495 Query 155767 AGAGGTCACGGGCATTAATTTGCTTGT-TGTATCTGCCTTCCGACTCATATTTCATATAC 155825 | | | |||| || || | |||| | ||| ||| || |||||| ||| Sbjct 277496 ACAACTTCTGGGCTTTGATG-GTTTGTCTACCTCTATTTTCACTTTCGTATTTCTCGTAC 277554 Query 155826 AGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAAC 155885 | || | | || ||||| ||| |||| | || ||| | || || | ||| Sbjct 277555 AAAGTCTTGAATTCATCACCATAAACATCAGCTAAACCTGGGGCTTCATTTGGAGAGAAC 277614 Query 155886 AGCGACCAAATTTTATTACCGATTACACGCT--CCATAAATACATCACTCGCCCAAATAG 155943 | | ||| ||| | || || || ||||||| | ||| ||| | | Sbjct 277615 AAAGTCCAGTCACCATT--CTTTTCAACTCTTTCCATAAACAAATCTGGAATCCACAAGG 277672 Query 155944 CATAGAAAAGGTCCCTTGCCTTTGACTCCT-CATCGCCGTGATTCTTCCGTAGCTCTAAG 156002 | ||| | || || || | ||| | || | | ||||||||||| | | || | | Sbjct 277673 CTGGGAACAAATCTCTGGC-TCTGATTTCTTCTTTTCCGTGATTCTTTCTGATGTCGATG 277731 Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG 156062 || || |||||| | || |||||| | |||| |||||| |||| |||||| Sbjct 277732 AAGTCGAAAATATCGGAGTGCCATGGCTCTAAGTACAAGGCAAAAGCACCAGGTCTCTTG 277791 Query 156063 ---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 ||||| || || || || | ||||| || ||||| || | | ||||||||| ||| Sbjct 277792 TTACCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAATACCCTGACCATAGGAATGATA 277851 Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179 || |||||||| || || || || ||| | | ||||| | || ||| ||||| Sbjct 277852 CCGTTGGAAGTACCGTTAGTACCAGCAATGTAAGCACCAGTACTTCTAATATTGTGAATG 277911 Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239 || | ||||||||||| | | || ||||| || ||| ||| | || | | || Sbjct 277912 TGCAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTGTCGTAA 277971 Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299 ||||| || ||||| ||||| | ||| | | | | || || | ||||| | | Sbjct 277972 ATACCATCGATAGAGTCATCCTTCATGGCCACCAAGAAACAAGACGACATCTGAGGACTT 278031 Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAA 156359 || || ||||| ||||| | || || | | ||| | || || | | |||||| | Sbjct 278032 GGAGTACCAGCATTGAACAAGGTTGGAGACCCGTGAGTGAAGTATCTTTGAGACATGTGG 278091 Query 156360 TCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATC 156419 | ||| ||||| | | ||| |||| | ||||| |||| | || || ||||| Sbjct 278092 TTGTAGGTCTCAATGACCTTTTCAATGTCGTCACCGTGGATACCAACAGCAACTCTCATG 278151 Query 156420 CACATATGCTGAGGACGCTCTACAATCACT---CCATCAATTCGCAGAAGGTATGCGCGT 156476 || || || || | ||| | |||| || || |||| || | || | | | Sbjct 278152 ATCAAGTGTTGTGGTCTCTCGGC---CACTTTACCGTCTATTCTCAACAAATACGATCTT 278208 Query 156477 TCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAAT 156529 |||| || || || || ||||||| | ||| ||||||| ||| |||| Sbjct 278209 TCCAAGGTCTTGAAACCAAAATAATTGTAGTTAAAGTCACGGTCGTACACAAT 278261 >seq125 Length=1080664 Score = 104 bits (114), Expect = 7e-17 Identities = 108/141 (77%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871 || |||||| | || ||| |||||||| || ||||| ||| || | ||||||||| Sbjct 184966 CAAAATTTCCTTAAGACGAGGAACACCCAATGTGACGTT---CTTAGAAGAAACACCAGC 184910 Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 | | ||||||||||||| || | |||||||| ||| |||||||| ||||| ||||| Sbjct 184909 ATAATGGAAAGTATTCAAGGTCATTTGAGTAGCTGGTTCACCAATGGACTGTGCGGCAAT 184850 Query 301932 CATACCAACCATTTCTCCTGG 301952 || ||||||||||| || || Sbjct 184849 CACGCCAACCATTTCACCAGG 184829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471813998186367