Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq180 100 2e-16 seq158 86.0 5e-12 >seq180 Length=546618 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||||||||| || |||||||| || || || ||||| || | ||| || || Sbjct 252379 AATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTC 252438 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || | | | | || ||| |||||| || || ||||| | || || || Sbjct 252439 CGACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCA 252498 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 || ||| | || | || ||||| || |||| |||| | ||| |||| || ||||| Sbjct 252499 ACAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTACAA 252558 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||||||| || || | ||| |||| ||||||||| |||| || Sbjct 252559 CATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 252606 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||| || || || || || ||||| || | ||| || || | Sbjct 252836 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252895 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || ||| |||||| || || ||||| | || || ||| Sbjct 252896 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAG 252955 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | || | || ||||| || |||| || | | ||| |||| || |||||| Sbjct 252956 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGATGGTAGAACTTTGGCTGATTACAAC 253015 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGA 107783 ||||||||||| ||||| | ||| |||| ||||||||| |||| ||| Sbjct 253016 ATTCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGA 253063 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||| || || || || || ||||| || | ||| || || | Sbjct 252608 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252667 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || ||| |||||| || || ||||| | || || || Sbjct 252668 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAA 252727 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | || | || ||||| || |||| |||| | ||| |||| || |||||| Sbjct 252728 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTACAAC 252787 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||||||| || || | ||| |||| ||||||||| |||| || Sbjct 252788 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 252834 >seq158 Length=604990 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||| ||||| || || || || || || || ||||||||| | ||| ||| | Sbjct 572526 AAGATGCAGATTTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGAGTCC 572467 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||| || | | | || ||| ||||| || || ||||| | || || Sbjct 572466 TCCGACACCATTGATAATGTCAAATCCAAGATCCAAGACAAGGAAGGAATTCCACCAGAC 572407 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || ||| | |||| || ||||| || |||| || | | ||| |||| |||||| Sbjct 572406 CAACAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGGCTGACTAC 572347 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| |||||||| || || | ||| ||||||| |||||| |||| || Sbjct 572346 AACATCCAAAAGGAATCCACTCTTCACTTGGTGTTAAGATTGAGAGGTGG 572297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875871489599