Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017-
04-25] 191 sequences; 10,912,061 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq180 141 7e-29
seq158 122 7e-23
>seq180
Length=546618
Score = 141 bits (156), Expect = 7e-29
Identities = 180/245 (73%), Gaps = 2/245 (1%)
Strand=Plus/Minus
Query 29543 CATCATTTTATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTT 29602
|| || || ||| ||||| || ||||| | || ||||| ||||| || ||||| ||||
Sbjct 253079 CACCAATTGATCAGTGTCCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTT 253020
Query 29603 GAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATC 29662
||||||| ||||| || | || | | ||| || | ||| || || || | |||||||
Sbjct 253019 GAATGTTGTAATCAGCCAAAGTTCTACCATCTTCCAATTGCTTACCGGCGAAGATCAATC 252960
Query 29663 TTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACA 29721
||||||| || || ||||| || || |||||||| ||| || | ||||||| | || |
Sbjct 252959 TTTGCTGGTCTGGTGGAATTCCTTCCTTGTCTTG-AATCTTGGATTTGACATTGTCAATG 252901
Query 29722 GTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATC 29781
||||| ||| ||| ||||| | ||| || || || || || ||||| || || || ||
Sbjct 252900 GTGTCGGAAGATTCAACTTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATT 252841
Query 29782 TGCAT 29786
|||||
Sbjct 252840 TGCAT 252836
Score = 140 bits (154), Expect = 2e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| ||||| |||||||| ||||||||||| ||||| ||
Sbjct 252606 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 252547
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || | ||| || || || | ||||||||||| || || || |||
Sbjct 252546 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGA 252487
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || |||||||| ||| || | ||||||| | || | ||||| ||| ||| ||
Sbjct 252486 ATTCCTTCCTTGTCTTG-AATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 252428
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||| | ||| || || || ||||| || |||||||| || || ||||||
Sbjct 252427 TTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCATT 252379
Score = 129 bits (142), Expect = 5e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| ||||| |||||||| ||||||||||| ||||| ||
Sbjct 252834 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 252775
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || | ||| || || || | ||||||||||| || || || |||
Sbjct 252774 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGA 252715
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || |||||||| ||| || | ||||||| | || | ||||| ||| ||| ||
Sbjct 252714 ATTCCTTCCTTGTCTTG-AATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 252656
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| | ||| || || || || || ||||| || || || || |||||
Sbjct 252655 TTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252608
>seq158
Length=604990
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | | |||||| ||||| |||||||| ||||| ||||| || || ||
Sbjct 572297 CCACCTCTCAATCTTAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGCC 572356
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || | ||| || ||||| | ||||||||||| || || || |||
Sbjct 572357 AAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGA 572416
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || |||||||| | || ||||||| | || | ||||| || || |||
Sbjct 572417 ATTCCTTCCTTGTCTTGGATCTTGGATTTGACATTATCAATGGTGTCGGAGGACTCGACT 572476
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| | || || || || ||||| ||||| ||||| || |||||||| ||
Sbjct 572477 TCCAAGGTAATGGTCTTACCAGTCAAGGTCTTAACGAAAATCTGCATCTT 572526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385218303281931
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |