Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq180 141 7e-29 seq158 122 7e-23 >seq180 Length=546618 Score = 141 bits (156), Expect = 7e-29 Identities = 180/245 (73%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 29543 CATCATTTTATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTT 29602 || || || ||| ||||| || ||||| | || ||||| ||||| || ||||| |||| Sbjct 253079 CACCAATTGATCAGTGTCCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTT 253020 Query 29603 GAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATC 29662 ||||||| ||||| || | || | | ||| || | ||| || || || | ||||||| Sbjct 253019 GAATGTTGTAATCAGCCAAAGTTCTACCATCTTCCAATTGCTTACCGGCGAAGATCAATC 252960 Query 29663 TTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACA 29721 ||||||| || || ||||| || || |||||||| ||| || | ||||||| | || | Sbjct 252959 TTTGCTGGTCTGGTGGAATTCCTTCCTTGTCTTG-AATCTTGGATTTGACATTGTCAATG 252901 Query 29722 GTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATC 29781 ||||| ||| ||| ||||| | ||| || || || || || ||||| || || || || Sbjct 252900 GTGTCGGAAGATTCAACTTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATT 252841 Query 29782 TGCAT 29786 ||||| Sbjct 252840 TGCAT 252836 Score = 140 bits (154), Expect = 2e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| ||||| |||||||| ||||||||||| ||||| || Sbjct 252606 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 252547 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | || || | ||| || || || | ||||||||||| || || || ||| Sbjct 252546 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGA 252487 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || |||||||| ||| || | ||||||| | || | ||||| ||| ||| || Sbjct 252486 ATTCCTTCCTTGTCTTG-AATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 252428 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| | ||| || || || ||||| || |||||||| || || |||||| Sbjct 252427 TTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCATT 252379 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| ||||| |||||||| ||||||||||| ||||| || Sbjct 252834 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 252775 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | || || | ||| || || || | ||||||||||| || || || ||| Sbjct 252774 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGA 252715 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || |||||||| ||| || | ||||||| | || | ||||| ||| ||| || Sbjct 252714 ATTCCTTCCTTGTCTTG-AATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 252656 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | ||| || || || || || ||||| || || || || ||||| Sbjct 252655 TTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252608 >seq158 Length=604990 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | | |||||| ||||| |||||||| ||||| ||||| || || || Sbjct 572297 CCACCTCTCAATCTTAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGCC 572356 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || | ||| || ||||| | ||||||||||| || || || ||| Sbjct 572357 AAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGA 572416 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || |||||||| | || ||||||| | || | ||||| || || ||| Sbjct 572417 ATTCCTTCCTTGTCTTGGATCTTGGATTTGACATTATCAATGGTGTCGGAGGACTCGACT 572476 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | || || || || ||||| ||||| ||||| || |||||||| || Sbjct 572477 TCCAAGGTAATGGTCTTACCAGTCAAGGTCTTAACGAAAATCTGCATCTT 572526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218303281931