Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017-
04-25] 191 sequences; 10,912,061 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq147 140 8e-28
seq103 95.1 3e-14
seq22 93.3 1e-13
seq31 84.2 5e-11
>seq147
Length=818043
Score = 140 bits (154), Expect = 8e-28
Identities = 414/629 (66%), Gaps = 11/629 (2%)
Strand=Plus/Minus
Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTC 110596
|| || ||||| ||||| || |||||||| || | ||| |||| | ||| | |||||
Sbjct 277997 ATGAAGGATGACTCTATCGATGGTATTTACGACAC-CTTGAAGACATGTGCCTTGATTTC 277939
Query 110597 TAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATAT 110656
|| | |||| || |||||| | ||| |||| ||||| | | || || | ||
Sbjct 277938 CAAGAGTGCTGGTGGTATTGGTTTGCACATTCACAATATTAGAAGTACTGGTGCTTACAT 277879
Query 110657 CGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACAC 110716
|| | || ||| |||| | || | |||| ||| | || || |||||| ||||
Sbjct 277878 TGCTGGTACTAACGGTACTTCCAACGGTATCATTCCTATGGTCAGGGTATTCAACAACAC 277819
Query 110717 TGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGA 110773
||| | ||| || | ||||||||| |||||| ||| | ||||| | || | ||
Sbjct 277818 TGCCAGATACGTCGACCAAGGTGGTAACAAGAGACCTGGTGCTTTTGCCTTGTACTTAGA 277759
Query 110774 ACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGA 110833
|| ||||| || ||||| || || ||| | || | | || ||||| ||| |||||
Sbjct 277758 GCCATGGCACTCCGATATTTTCGACTTCATCGACATCAGAAAGAATCACGGAAAAGAAGA 277699
Query 110834 ACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGT 110893
| ||||| | ||||| || || |||||||| ||||||| || ||| || | ||
Sbjct 277698 AATCAGAGCCAGAGATTTGTTCCCAGCCTTGTGGATTCCAGATTTGTTTATGGAAAGAGT 277639
Query 110894 TCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGT 110953
| || | ||||| ||| || | | | ||| || | || ||| || |||||||
Sbjct 277638 TGAAAAGAATGGTGACTGGACTTTGTTCTCTCCAAATGAAGCCCCAGGTTTAGCTGATGT 277579
Query 110954 ATATGGAAAAGAGTTTGAAGACCTT-TACGAAAAATATGAAAAAGAAGGCA-AGTTTCGC 111011
||||| | || || ||||| || ||||| ||||| |||| ||| | || | |
Sbjct 277578 TTATGGTGATGA-ATTCAAGACTTTGTACGAGAAATACGAAAGTGAAAATAGAGGTAGAC 277520
Query 111012 AAACAAATTCCAGCTCAAGAACTT-TGGTTCAAAATCCTTGAATCACAAGTTGAAACTGG 111070
|||| | || | | |||| || |||| | ||| | ||| | ||| ||||| ||
Sbjct 277519 AAACCA--TCAAAGCCCAGAAGTTGTGGTACGCAATTTTGGAAGCTCAAACCGAAACCGG 277462
Query 111071 AACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGG 111130
||||||| || ||||| || || | ||| || | ||||||| ||| || ||
Sbjct 277461 TACTCCTTTCATGTTGTACAAGGACGCTTGTAACAAGAAGACCAATCAAAAGAACTTGGG 277402
Query 111131 AACAATTAAGTCTAGTAATTTGTGCTGTG 111159
| || || ||| ||| ||||| ||||
Sbjct 277401 TATCATCAAATCTTCTAACTTGTGTTGTG 277373
>seq103
Length=1665694
Score = 95.1 bits (104), Expect = 3e-14
Identities = 151/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 131794 AATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTC 131853
|||||| | ||||| || |||||| | | ||||||| | ||| | ||| || |||
Sbjct 214840 AATTAAGAGAAAAGCTGACTGGGCTTTGAGATGGATTAATGATAACGATGCT--TTGTTC 214897
Query 131854 --TACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGT 131911
| |||| | || ||||| ||| ||||||||||| |||||| ||| |||| |
Sbjct 214898 GGTGAAAGATTAGTCGCTTTCGCTGCCGTTGAAGGTATTTTCTTTAGTGGTTCTTTTGCT 214957
Query 131912 GCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTC 131971
|||| || ||| | ||||| | || || ||||| || | | || |||||| ||||
Sbjct 214958 TCTATTTTCTGGTTGAAGAAAAGAGGTTTAATGCCAGGTTTGACTTTCTCCAATGAATTG 215017
Query 131972 ATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006
|| | ||||| |||| |||||||| || |||||
Sbjct 215018 ATTTGCAGAGACGAAGGTTTGCATACAGACTTTGC 215052
>seq22
Length=388011
Score = 93.3 bits (102), Expect = 1e-13
Identities = 152/215 (71%), Gaps = 12/215 (6%)
Strand=Plus/Plus
Query 279873 TGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAATTG- 279931
||||||| || || || || | ||| | |||| |||||||||| ||||| |||
Sbjct 269169 TGGATGGGTTCAAGCCCGGTCAAAGAAAGGTATTATTTGGTTGTTTCAAGAGAAATTTGA 269228
Query 279932 -GTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATCA 279990
|| | ||||| || |||||| |||| |||||||||||||||||| | || |||||
Sbjct 269229 AGTCA--GAAATCAAGGTAGCTCAGCTAGCCGGTTATGTTTCAGAACATACTGGGTATCA 269286
Query 279991 TCACGGTGAAGCGTCTCTTCAAGGTG----CTATTGTAGGTCTTGCCCAAGATTTTATGG 280046
||||||||| || ||| |||| |||| | ||| | || ||| |||| || |
Sbjct 269287 CCACGGTGAACAATC-CTT---GGTGCAGACTATCATTGGTTTGGCTCAAAATTTCATTG 269342
Query 280047 CTTCAAACAACTTAAATCTGCTTTCACCAAATGGT 280081
||||| ||||| ||||| | ||| ||||||
Sbjct 269343 GATCAAATAACTTGAATCTTTTAAAACCTAATGGT 269377
>seq31
Length=351742
Score = 84.2 bits (92), Expect = 5e-11
Identities = 116/159 (73%), Gaps = 4/159 (3%)
Strand=Plus/Plus
Query 305329 GGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAA 305388
|||||| |||||||| || ||||| |||| | | ||||||| | | || | | |||
Sbjct 5490 GGTTCTATTCAATAGACAGCCATCTTTGCACAGATTGTCTATTTTATCACACTATGCCAA 5549
Query 305389 AGTATTATCT-GGATTGACATTTC-GATTAAATGTAAGTGCTTGTACGCCTTATAATGCG 305446
|| | || ||| || |||| | || |||| ||| |||||| ||||| |||||
Sbjct 5550 GATAAGACCTTGGA--GAACTTTCAGGTTGAATGAGTGTGTTTGTACACCTTACAATGCT 5607
Query 305447 GATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485
||||| ||||| ||||||||||| |||| ||||| |||
Sbjct 5608 GATTTCGATGGTGATGAAATGAACTTGCACGTACCACAA 5646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186809895646551
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |