Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq147 140 8e-28 seq103 95.1 3e-14 seq22 93.3 1e-13 seq31 84.2 5e-11 >seq147 Length=818043 Score = 140 bits (154), Expect = 8e-28 Identities = 414/629 (66%), Gaps = 11/629 (2%) Strand=Plus/Minus Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTC 110596 || || ||||| ||||| || |||||||| || | ||| |||| | ||| | ||||| Sbjct 277997 ATGAAGGATGACTCTATCGATGGTATTTACGACAC-CTTGAAGACATGTGCCTTGATTTC 277939 Query 110597 TAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATAT 110656 || | |||| || |||||| | ||| |||| ||||| | | || || | || Sbjct 277938 CAAGAGTGCTGGTGGTATTGGTTTGCACATTCACAATATTAGAAGTACTGGTGCTTACAT 277879 Query 110657 CGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACAC 110716 || | || ||| |||| | || | |||| ||| | || || |||||| |||| Sbjct 277878 TGCTGGTACTAACGGTACTTCCAACGGTATCATTCCTATGGTCAGGGTATTCAACAACAC 277819 Query 110717 TGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGA 110773 ||| | ||| || | ||||||||| |||||| ||| | ||||| | || | || Sbjct 277818 TGCCAGATACGTCGACCAAGGTGGTAACAAGAGACCTGGTGCTTTTGCCTTGTACTTAGA 277759 Query 110774 ACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGA 110833 || ||||| || ||||| || || ||| | || | | || ||||| ||| ||||| Sbjct 277758 GCCATGGCACTCCGATATTTTCGACTTCATCGACATCAGAAAGAATCACGGAAAAGAAGA 277699 Query 110834 ACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGT 110893 | ||||| | ||||| || || |||||||| ||||||| || ||| || | || Sbjct 277698 AATCAGAGCCAGAGATTTGTTCCCAGCCTTGTGGATTCCAGATTTGTTTATGGAAAGAGT 277639 Query 110894 TCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGT 110953 | || | ||||| ||| || | | | ||| || | || ||| || ||||||| Sbjct 277638 TGAAAAGAATGGTGACTGGACTTTGTTCTCTCCAAATGAAGCCCCAGGTTTAGCTGATGT 277579 Query 110954 ATATGGAAAAGAGTTTGAAGACCTT-TACGAAAAATATGAAAAAGAAGGCA-AGTTTCGC 111011 ||||| | || || ||||| || ||||| ||||| |||| ||| | || | | Sbjct 277578 TTATGGTGATGA-ATTCAAGACTTTGTACGAGAAATACGAAAGTGAAAATAGAGGTAGAC 277520 Query 111012 AAACAAATTCCAGCTCAAGAACTT-TGGTTCAAAATCCTTGAATCACAAGTTGAAACTGG 111070 |||| | || | | |||| || |||| | ||| | ||| | ||| ||||| || Sbjct 277519 AAACCA--TCAAAGCCCAGAAGTTGTGGTACGCAATTTTGGAAGCTCAAACCGAAACCGG 277462 Query 111071 AACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGG 111130 ||||||| || ||||| || || | ||| || | ||||||| ||| || || Sbjct 277461 TACTCCTTTCATGTTGTACAAGGACGCTTGTAACAAGAAGACCAATCAAAAGAACTTGGG 277402 Query 111131 AACAATTAAGTCTAGTAATTTGTGCTGTG 111159 | || || ||| ||| ||||| |||| Sbjct 277401 TATCATCAAATCTTCTAACTTGTGTTGTG 277373 >seq103 Length=1665694 Score = 95.1 bits (104), Expect = 3e-14 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 131794 AATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTC 131853 |||||| | ||||| || |||||| | | ||||||| | ||| | ||| || ||| Sbjct 214840 AATTAAGAGAAAAGCTGACTGGGCTTTGAGATGGATTAATGATAACGATGCT--TTGTTC 214897 Query 131854 --TACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGT 131911 | |||| | || ||||| ||| ||||||||||| |||||| ||| |||| | Sbjct 214898 GGTGAAAGATTAGTCGCTTTCGCTGCCGTTGAAGGTATTTTCTTTAGTGGTTCTTTTGCT 214957 Query 131912 GCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTC 131971 |||| || ||| | ||||| | || || ||||| || | | || |||||| |||| Sbjct 214958 TCTATTTTCTGGTTGAAGAAAAGAGGTTTAATGCCAGGTTTGACTTTCTCCAATGAATTG 215017 Query 131972 ATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006 || | ||||| |||| |||||||| || ||||| Sbjct 215018 ATTTGCAGAGACGAAGGTTTGCATACAGACTTTGC 215052 >seq22 Length=388011 Score = 93.3 bits (102), Expect = 1e-13 Identities = 152/215 (71%), Gaps = 12/215 (6%) Strand=Plus/Plus Query 279873 TGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAATTG- 279931 ||||||| || || || || | ||| | |||| |||||||||| ||||| ||| Sbjct 269169 TGGATGGGTTCAAGCCCGGTCAAAGAAAGGTATTATTTGGTTGTTTCAAGAGAAATTTGA 269228 Query 279932 -GTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATCA 279990 || | ||||| || |||||| |||| |||||||||||||||||| | || ||||| Sbjct 269229 AGTCA--GAAATCAAGGTAGCTCAGCTAGCCGGTTATGTTTCAGAACATACTGGGTATCA 269286 Query 279991 TCACGGTGAAGCGTCTCTTCAAGGTG----CTATTGTAGGTCTTGCCCAAGATTTTATGG 280046 ||||||||| || ||| |||| |||| | ||| | || ||| |||| || | Sbjct 269287 CCACGGTGAACAATC-CTT---GGTGCAGACTATCATTGGTTTGGCTCAAAATTTCATTG 269342 Query 280047 CTTCAAACAACTTAAATCTGCTTTCACCAAATGGT 280081 ||||| ||||| ||||| | ||| |||||| Sbjct 269343 GATCAAATAACTTGAATCTTTTAAAACCTAATGGT 269377 >seq31 Length=351742 Score = 84.2 bits (92), Expect = 5e-11 Identities = 116/159 (73%), Gaps = 4/159 (3%) Strand=Plus/Plus Query 305329 GGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAA 305388 |||||| |||||||| || ||||| |||| | | ||||||| | | || | | ||| Sbjct 5490 GGTTCTATTCAATAGACAGCCATCTTTGCACAGATTGTCTATTTTATCACACTATGCCAA 5549 Query 305389 AGTATTATCT-GGATTGACATTTC-GATTAAATGTAAGTGCTTGTACGCCTTATAATGCG 305446 || | || ||| || |||| | || |||| ||| |||||| ||||| ||||| Sbjct 5550 GATAAGACCTTGGA--GAACTTTCAGGTTGAATGAGTGTGTTTGTACACCTTACAATGCT 5607 Query 305447 GATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 ||||| ||||| ||||||||||| |||| ||||| ||| Sbjct 5608 GATTTCGATGGTGATGAAATGAACTTGCACGTACCACAA 5646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186809895646551