Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017-
04-25] 191 sequences; 10,912,061 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq180 122 8e-23
seq147 118 9e-22
seq158 93.3 4e-14
>seq180
Length=546618
Score = 122 bits (134), Expect = 8e-23
Identities = 169/237 (71%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || || || || ||||| || | ||||| | ||||| ||| | |
Sbjct 252836 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252895
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || || || | || ||| || ||| || || || || || || || || |||
Sbjct 252896 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAG 252955
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|||||| | || | || ||| || ||| | ||||||| ||||| | | ||||||||
Sbjct 252956 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGATGGTAGAACTTTGGCTGATTACAAC 253015
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGATCA 25411
|||||||| ||||| ||| |||| || || || ||||||||||| ||| | ||||||
Sbjct 253016 ATTCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGACACTGATCA 253072
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| || || || || | ||||| | ||||| ||| | |
Sbjct 252380 ATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252439
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || || || | || ||| || ||| || || || || || || || || ||
Sbjct 252440 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAA 252499
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|||||| | || | || ||| || ||| | ||||| | ||||| | | ||||||||
Sbjct 252500 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTACAAC 252559
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||||||| |||||||| |||| || || || ||||||||||| ||
Sbjct 252560 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 252606
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || || || || ||||| || | ||||| | ||||| ||| | |
Sbjct 252608 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252667
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || || || | || ||| || ||| || || || || || || || || ||
Sbjct 252668 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAA 252727
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|||||| | || | || ||| || ||| | ||||| | ||||| | | ||||||||
Sbjct 252728 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTACAAC 252787
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||||||| |||||||| |||| || || || ||||||||||| ||
Sbjct 252788 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 252834
>seq147
Length=818043
Score = 118 bits (130), Expect = 9e-22
Identities = 489/758 (65%), Gaps = 25/758 (3%)
Strand=Plus/Plus
Query 136981 TTTACTACTTGATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGC 137040
|| || | ||| |||| || || | |||||| | ||||| ||| ||| | ||
Sbjct 276742 TTAACAATTTGGAATTCTCCTGACAACACTCTTCTAGAGTACATGTTAGAAGTATATGGT 276801
Query 137041 TCGAACGATTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATC 137100
||||| |||||||||||||||| || || | ||| | || || ||||| ||| | |
Sbjct 276802 TCGAAACATTCGTTGTTACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATAGGAGCAACC 276861
Query 137101 AACAATGAATTCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCAC 137160
|||||||| || | |||||| ||| ||||| | |||||| | | ||||| ||
Sbjct 276862 AACAATGAGTTTCTTAAACCATGTTGGGCCATCTTTTGCTTCAAAGTATCCCAGTCCC-- 276919
Query 137161 AGATTGTTCGATTGG-GTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGG 137219
|| |||| |||| || | ||||||||||| | ||||| | || || || ||
Sbjct 276920 --ATAATTCGGTTGGCTTTCTGTTCCACAAATCGTATTGCAACAAACCTTGAGAAGCTGG 276977
Query 137220 ACTTTCTGCATAAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAG 137279
| || | || || || || | || | | |||| ||||||| | |
Sbjct 276978 AGAACCTTCGTAGGATTCGTAAGGACCTTCGATAACTGCCAATTCAATAGAGGCTTCAAC 277037
Query 137280 TGCGCCATAGTAAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGGCTGTC 137339
|| || | ||| || |||||| |||||| |||| ||||| | |||||||| |||
Sbjct 277038 AGCACCGTGGTAGATGGTTTCGAAGATTTGAATATTTAATTCCTTGGCTTCTTGAGAGTC 277097
Query 137340 GTAGGGCATATC-CAATATAGC---GAAAGCATCTGCAAGTCCTTGAATACCGATACCGA 137395
| | || | ||| ||| ||| ||||| ||| || | ||||| | ||| | | | |
Sbjct 277098 GAATGGTA-ATCTCAA---AGCCATGAAAGTATCAGCCAAACCTTGGACACCCAAAGCAA 277153
Query 137396 TAGGTCTGTGTTTAAAATTTGATATTTGAGCGCTAACAAGCGGATAAAAGTTTGCGTCTA 137455
| ||||||| || | ||| ||| || || | || || || |||||| ||| |
Sbjct 277154 TTGGTCTGTTCTTCATATTGGATCTTCTAGACTCAGGAACTGGGTAGAAGTTTCTGTCAA 277213
Query 137456 TAATTCTATTGAGATTGTTAGTAACGACTCTGGACACTTTGTAGAGCAATTCGAAATCGA 137515
| ||||| || | || | || || || | || | || || | | |||||| | |
Sbjct 277214 TGATTCTGTTCAAGTTTCTGGTGACAACCTTAGAAATTTCGTGCAACTTTTCGAAGTTGT 277273
Query 137516 AGCTTTTAGACTGTT------TGTTAGCAAAATTATTG-ACGGCAATAGAGGCTAAGTTG 137568
| | | || | || | | | ||||| || | | |||||||| || |||||
Sbjct 277274 ACCAAGTGGAGTTTTCATCGGTTTCAACAAAA-GATGGTAAAGCAATAGAAGCCAAGTTA 277332
Query 137569 CATACGGCCGTTTCTGTATTGTCGCTGTATTGTACAATTTCGGCGCA-AAGATTGCTGTT 137627
|| ||||| |||| | ||| ||||| |||||||| || ||| | | | |
Sbjct 277333 CAGACGGCAACTTCTTCAGGGTCTGAGTATTCAACAATTTCACAACACAAGTTAGAAGAT 277392
Query 137628 TCGGATCACTCCCAAATTCTTTTGATTGTTTTTCTCGTTGACGTG-ATCTTTATATATCA 137686
| ||| | ||||| |||||||||||| | |||| ||| || | || || || | ||
Sbjct 277393 T-TGATGATACCCAAGTTCTTTTGATTGGTCTTCTTGTT-ACAAGCGTCCTTGTACAACA 277450
Query 137687 TATACGGAGTTCCGGTTTCGACTTGAGTCTCAACAATT 137724
| | ||||| ||||||||| ||||| || | ||||
Sbjct 277451 TGAAAGGAGTACCGGTTTCGGTTTGAGCTTCCAAAATT 277488
>seq158
Length=604990
Score = 93.3 bits (102), Expect = 4e-14
Identities = 161/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 25168 AAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGA 25227
|| ||| ||||| | || || || || || || || || | || || | ||||||||
Sbjct 572530 AACCAAGATGCAGATTTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGA 572471
Query 25228 AGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCC 25287
|| ||| || || || | || ||| || || || || || || || || ||
Sbjct 572470 GTCCTCCGACACCATTGATAATGTCAAATCCAAGATCCAAGACAAGGAAGGAATTCCACC 572411
Query 25288 CGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGA 25347
|| || |||||| | |||| || || || ||| | ||||||| |||| | | ||
Sbjct 572410 AGACCAACAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGGCTGA 572351
Query 25348 TTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||||| || ||||| |||||||| |||| || ||||||||||||||||| ||
Sbjct 572350 CTACAACATCCAAAAGGAATCCACTCTTCACTTGGTGTTAAGATTGAGAGGTGG 572297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445093337337120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |