Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq180 122 8e-23 seq147 118 9e-22 seq158 93.3 4e-14 >seq180 Length=546618 Score = 122 bits (134), Expect = 8e-23 Identities = 169/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || || ||||| || | ||||| | ||||| ||| | | Sbjct 252836 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252895 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || ||| || ||| || || || || || || || || ||| Sbjct 252896 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAG 252955 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||| | || | || ||| || ||| | ||||||| ||||| | | |||||||| Sbjct 252956 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGATGGTAGAACTTTGGCTGATTACAAC 253015 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGATCA 25411 |||||||| ||||| ||| |||| || || || ||||||||||| ||| | |||||| Sbjct 253016 ATTCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGACACTGATCA 253072 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| || || || || | ||||| | ||||| ||| | | Sbjct 252380 ATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252439 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || ||| || ||| || || || || || || || || || Sbjct 252440 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAA 252499 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||| | || | || ||| || ||| | ||||| | ||||| | | |||||||| Sbjct 252500 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTACAAC 252559 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||| |||||||| |||| || || || ||||||||||| || Sbjct 252560 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 252606 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || || ||||| || | ||||| | ||||| ||| | | Sbjct 252608 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252667 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || ||| || ||| || || || || || || || || || Sbjct 252668 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAA 252727 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||| | || | || ||| || ||| | ||||| | ||||| | | |||||||| Sbjct 252728 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTACAAC 252787 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||| |||||||| |||| || || || ||||||||||| || Sbjct 252788 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 252834 >seq147 Length=818043 Score = 118 bits (130), Expect = 9e-22 Identities = 489/758 (65%), Gaps = 25/758 (3%) Strand=Plus/Plus Query 136981 TTTACTACTTGATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGC 137040 || || | ||| |||| || || | |||||| | ||||| ||| ||| | || Sbjct 276742 TTAACAATTTGGAATTCTCCTGACAACACTCTTCTAGAGTACATGTTAGAAGTATATGGT 276801 Query 137041 TCGAACGATTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATC 137100 ||||| |||||||||||||||| || || | ||| | || || ||||| ||| | | Sbjct 276802 TCGAAACATTCGTTGTTACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATAGGAGCAACC 276861 Query 137101 AACAATGAATTCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCAC 137160 |||||||| || | |||||| ||| ||||| | |||||| | | ||||| || Sbjct 276862 AACAATGAGTTTCTTAAACCATGTTGGGCCATCTTTTGCTTCAAAGTATCCCAGTCCC-- 276919 Query 137161 AGATTGTTCGATTGG-GTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGG 137219 || |||| |||| || | ||||||||||| | ||||| | || || || || Sbjct 276920 --ATAATTCGGTTGGCTTTCTGTTCCACAAATCGTATTGCAACAAACCTTGAGAAGCTGG 276977 Query 137220 ACTTTCTGCATAAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAG 137279 | || | || || || || | || | | |||| ||||||| | | Sbjct 276978 AGAACCTTCGTAGGATTCGTAAGGACCTTCGATAACTGCCAATTCAATAGAGGCTTCAAC 277037 Query 137280 TGCGCCATAGTAAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGGCTGTC 137339 || || | ||| || |||||| |||||| |||| ||||| | |||||||| ||| Sbjct 277038 AGCACCGTGGTAGATGGTTTCGAAGATTTGAATATTTAATTCCTTGGCTTCTTGAGAGTC 277097 Query 137340 GTAGGGCATATC-CAATATAGC---GAAAGCATCTGCAAGTCCTTGAATACCGATACCGA 137395 | | || | ||| ||| ||| ||||| ||| || | ||||| | ||| | | | | Sbjct 277098 GAATGGTA-ATCTCAA---AGCCATGAAAGTATCAGCCAAACCTTGGACACCCAAAGCAA 277153 Query 137396 TAGGTCTGTGTTTAAAATTTGATATTTGAGCGCTAACAAGCGGATAAAAGTTTGCGTCTA 137455 | ||||||| || | ||| ||| || || | || || || |||||| ||| | Sbjct 277154 TTGGTCTGTTCTTCATATTGGATCTTCTAGACTCAGGAACTGGGTAGAAGTTTCTGTCAA 277213 Query 137456 TAATTCTATTGAGATTGTTAGTAACGACTCTGGACACTTTGTAGAGCAATTCGAAATCGA 137515 | ||||| || | || | || || || | || | || || | | |||||| | | Sbjct 277214 TGATTCTGTTCAAGTTTCTGGTGACAACCTTAGAAATTTCGTGCAACTTTTCGAAGTTGT 277273 Query 137516 AGCTTTTAGACTGTT------TGTTAGCAAAATTATTG-ACGGCAATAGAGGCTAAGTTG 137568 | | | || | || | | | ||||| || | | |||||||| || ||||| Sbjct 277274 ACCAAGTGGAGTTTTCATCGGTTTCAACAAAA-GATGGTAAAGCAATAGAAGCCAAGTTA 277332 Query 137569 CATACGGCCGTTTCTGTATTGTCGCTGTATTGTACAATTTCGGCGCA-AAGATTGCTGTT 137627 || ||||| |||| | ||| ||||| |||||||| || ||| | | | | Sbjct 277333 CAGACGGCAACTTCTTCAGGGTCTGAGTATTCAACAATTTCACAACACAAGTTAGAAGAT 277392 Query 137628 TCGGATCACTCCCAAATTCTTTTGATTGTTTTTCTCGTTGACGTG-ATCTTTATATATCA 137686 | ||| | ||||| |||||||||||| | |||| ||| || | || || || | || Sbjct 277393 T-TGATGATACCCAAGTTCTTTTGATTGGTCTTCTTGTT-ACAAGCGTCCTTGTACAACA 277450 Query 137687 TATACGGAGTTCCGGTTTCGACTTGAGTCTCAACAATT 137724 | | ||||| ||||||||| ||||| || | |||| Sbjct 277451 TGAAAGGAGTACCGGTTTCGGTTTGAGCTTCCAAAATT 277488 >seq158 Length=604990 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 25168 AAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGA 25227 || ||| ||||| | || || || || || || || || | || || | |||||||| Sbjct 572530 AACCAAGATGCAGATTTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGA 572471 Query 25228 AGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCC 25287 || ||| || || || | || ||| || || || || || || || || || Sbjct 572470 GTCCTCCGACACCATTGATAATGTCAAATCCAAGATCCAAGACAAGGAAGGAATTCCACC 572411 Query 25288 CGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGA 25347 || || |||||| | |||| || || || ||| | ||||||| |||| | | || Sbjct 572410 AGACCAACAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGGCTGA 572351 Query 25348 TTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| || ||||| |||||||| |||| || ||||||||||||||||| || Sbjct 572350 CTACAACATCCAAAAGGAATCCACTCTTCACTTGGTGTTAAGATTGAGAGGTGG 572297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445093337337120