Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq103 181 8e-41 seq11 95.1 1e-14 >seq103 Length=1665694 Score = 181 bits (200), Expect = 8e-41 Identities = 402/596 (67%), Gaps = 18/596 (3%) Strand=Plus/Plus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 || || ||| |||| ||||| | || ||||| || ||||||||||||||||| || | Sbjct 214466 AGATTCGTCTTGTTCCCAATCAAGTACCATGAGATTTGGCAAATGTACAAAAAGGCTGAA 214525 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGA--CTTAGCACATTGGATTG 43814 || || |||||||| || || ||| | || ||| |||||| || | || |||| Sbjct 214526 GCCTCTTTTTGGACTGCTGAGGAAATCGACTTGGGTAAAGATACTCATGAC--TGGAA-- 214581 Query 43815 CATTAA----AACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGC 43869 || || ||| | || |||| |||| | || ||||||| || || ||||| Sbjct 214582 CAACAAGTTGAACGATAACGAAAGGTTTTTTGTTTCCAGAATTTTGGCTTTCTTCGCTGC 214641 Query 43870 GAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACC 43929 || || || ||||||||||| |||||| ||| | ||||||||| | || Sbjct 214642 CTCTGATGGTATCGTCAATGAAAACTTGGTTGAAAACTTTTCTGCCGAAGTTCAAGTGCC 214701 Query 43930 AGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTA 43989 ||||| ||||| || || || ||||| || ||||| || || || |||| || Sbjct 214702 TGAAGCCAAGTGTTTCTACGGTTTCCAAATCATGATGGAAAACATCCACTCCGAAACCTA 214761 Query 43990 CAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAAT 44047 | | | |||| || | |||||||| ||| || ||||| | ||||| || Sbjct 214762 CTCTTTGTTGATCGACTCATACATCAAGGAT--CCAAAGGAAGCTGACTTCTTGTTCAAC 214819 Query 44048 GCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAAT 44107 || || ||||| | || ||||| ||||| |||||||| | | |||||| ||| Sbjct 214820 GCTATCGAAACCATTCCACAAATTAAGAGAAAAGCTGACTGGGCTTTGAGATGGATTAAT 214879 Query 44108 TCAAATGATTCT---TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTC 44164 || ||| || || || ||| || | ||||| || || | || ||||| |||||| Sbjct 214880 GATAACGATGCTTTGTTCGGTGAAAGATTAGTCGCTTTCGCTGCCGTTGAAGGTATTTTC 214939 Query 44165 TTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTG 44224 ||| || || ||||| | || || ||||| |||||| ||||||| ||||| || ||| Sbjct 214940 TTTAGTGGTTCTTTTGCTTCTATTTTCTGGTTGAAGAAAAGAGGTTTAATGCCAGGTTTG 214999 Query 44225 ACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280 || || || ||||| || || | | || ||||| || ||| || ||||| || Sbjct 215000 ACTTTCTCCAATGAATTGATTTGCAGAGACGAAGGTTTGCATACAGACTTTGCATG 215055 >seq11 Length=437420 Score = 95.1 bits (104), Expect = 1e-14 Identities = 230/346 (66%), Gaps = 13/346 (4%) Strand=Plus/Plus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 ||||| || || |||||||| || || || | |||||| || ||| ||| ||||| || Sbjct 367912 CCCAAGATCGTCAATGGTCCCGAGATGTTGAGTAAATACGTGGGTGCATCAGAAGAGAAC 367971 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCT 19548 | || || || || || ||| | || | |||| |||||| | || | | Sbjct 367972 ATTCGTAACTTATTCAAGGATGCAGAACAGGAGTACAAACAGA-AGGGCG-AGAATTCCG 368029 Query 19549 --TTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGT------- 19599 || ||||| || || | || || |||||| | | | |||||||||||| Sbjct 368030 GCTTACACATCATCATCTTTGACGAGTTGGACTCGGTGTTCAAGCAAAGAGGTGCCAACA 368089 Query 19600 --TCTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACG 19657 |||| || | |||||| || | ||||| ||||| | || | ||| | || | Sbjct 368090 AGTCTGATGGTACTGGAGTTGGGGATAACGTTGTGAATCAGTTGTTGGCCAAAATGGATG 368149 Query 19658 GTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAG 19717 ||||| |||| ||||||| ||||| | ||||| ||||| || ||| |||| | |||| Sbjct 368150 GTGTTGACCAGTTGAATAACATTTTGATCATTGGTATGACCAACAGATTGGATCTTATAG 368209 Query 19718 ACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAAT 19763 | | |||||||| |||| ||| | || || || | || ||||| Sbjct 368210 ATAATGCCTTATTGAGACCTGGTAGATTTGAGATCCAAATTGAAAT 368255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455074796955