Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq147 118 1e-21 >seq147 Length=818043 Score = 118 bits (130), Expect = 1e-21 Identities = 341/522 (65%), Gaps = 2/522 (0%) Strand=Plus/Minus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||| |||| || || || ||||| || |||||| | ||| ||||| ||| Sbjct 278152 TCATGAGAGTTGCTGTTGGTATCCACGGTGACGACATTGAAAAGGTCATTGAGACCTACA 278093 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 ||| ||| || | | |||||| |||| | | || ||| | ||||| || ||||| Sbjct 278092 ACCACATGTCTCAAAGATACTTCACTCACGGGTCTCCAACCTTGTTCAATGCTGGTACTC 278033 Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295 | || ||||||||| |||||| | ||||| |||||||||||| || || || | Sbjct 278032 CAAGTCCTCAGATGTCGTCTTGTTTCTTGGTGGCCATGAAGGATGACTCTATCGATGGTA 277973 Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355 | ||||| || | ||| || || || |||||| | | || ||||| || | | Sbjct 277972 TTTACGACACCTTGAAGACATGTGCCTTGATTTCCAAGAGTGCTGGTGGTATTGGTTTGC 277913 Query 19356 AC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGAC 19414 || | | | ||||| | | |||| | || ||| || ||||| || || Sbjct 277912 ACATTCAC-AATATTAGAAGTACTGGTGCTTACATTGCTGGTACTAACGGTACTTCCAAC 277854 Query 19415 GGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGC 19474 |||||| | || ||| || | || ||||||||||| ||||| |||||| |||| || || Sbjct 277853 GGTATCATTCCTATGGTCAGGGTATTCAACAACACTGCCAGATACGTCGACCAAGGTGGT 277794 Query 19475 GGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534 ||| | || | || ||| | ||| | |||||||||||| | || | | || Sbjct 277793 AACAAGAGACCTGGTGCTTTTGCCTTGTACTTAGAGCCATGGCACTCCGATATTTTCGAC 277734 Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACG 19594 ||| |||| | | ||| || || | || || || | | || | ||| | Sbjct 277733 TTCATCGACATCAGAAAGAATCACGGAAAAGAAGAAATCAGAGCCAGAGATTTGTTCCCA 277674 Query 19595 GCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAG 19636 |||||||||||||| || | || ||||| | ||||| ||| Sbjct 277673 GCCTTGTGGATTCCAGATTTGTTTATGGAAAGAGTTGAAAAG 277632 Score = 93.3 bits (102), Expect = 5e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 |||| |||||||||||| || ||||| |||||||||||||| ||||| | |||||| Sbjct 276433 GTTCTCAAATAGTACATACCAGTCTTAAGACCCTTCTTCCAACCGTAGAAGTGCATTGAG 276492 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309 | || || ||| | |||| || ||| || || | || ||||| || || ||| Sbjct 276493 GTCAATTTACCCATTGTTGGGTCCTTGATGTGAATATTCAAGGATTGGGATTGATCAATG 276552 Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGA 78340 | ||| | | |||||| ||||||||||||| Sbjct 276553 AAAGCAGCTCTGTCGGCGGCCATGTCGATGA 276583 Score = 89.7 bits (98), Expect = 6e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 20619 TCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGG 20678 |||||| | || | ||| |||||||||||| | || || |||||||||||||| | Sbjct 276628 TCAAGGCTTTGTATAAGACGGTATGGGAAATCTCCCAAAAACATATCATCGACATGGCCG 276569 Query 20679 CCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGA 20738 |||| | | || | ||| || || ||||| || | ||| | ||| || | || | Sbjct 276568 CCGACAGAGCTGCTTTCATTGATCAATCCCAATCCTTGAATATTCACATCAAGGACCCAA 276509 Query 20739 GCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCA 20798 ||| || ||| ||| ||||| | ||||| ||| | ||||| || ||||| || | Sbjct 276508 CAATGGGTAAATTGACCTCAATGCACTTCTACGGTTGGAAGAAGGGTCTTAAGACTGGTA 276449 Query 20799 TGTACTATCTGCGGACCCGAGC 20820 |||||||| || | |||| ||| Sbjct 276448 TGTACTATTTGAGAACCCAAGC 276427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523490397040