Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017-
04-25] 191 sequences; 10,912,061 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq180 131 2e-25
seq158 123 3e-23
seq147 118 1e-21
>seq180
Length=546618
Score = 131 bits (144), Expect = 2e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | ||||| ||||| || ||| | || ||||| ||
Sbjct 252836 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252895
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | || | || ||||| |||||||| |||||||| |||||||||
Sbjct 252896 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAG 252955
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || || || ||||||||| | || |||| | | || | || || || ||
Sbjct 252956 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGATGGTAGAACTTTGGCTGATTACAAC 253015
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
| ||||||||||| || ||||| | |||||| | | | ||||||||
Sbjct 253016 ATTCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGACA 253065
Score = 123 bits (136), Expect = 3e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | ||||| ||||| || ||| | || ||||| ||
Sbjct 252608 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252667
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | || | || ||||| |||||||| |||||||| ||||||||
Sbjct 252668 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAA 252727
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || || || ||||||||| | || || | | | || | || || || ||
Sbjct 252728 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTACAAC 252787
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| ||||||||||||||||||||
Sbjct 252788 ATTCAAAAGGAATCCACTCTTCA 252810
Score = 114 bits (126), Expect = 1e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
||||||||||| || || || || | || || ||||| || ||| | || ||||| ||
Sbjct 252377 ATAATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCT 252436
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|| | ||||| ||| | || | || ||||| |||||||| |||||||| ||||||
Sbjct 252437 TCCGACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGAC 252496
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|| || | | || || || ||||||||| | || || | | | || | || || ||
Sbjct 252497 CAACAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTAC 252556
Query 27583 AATGTCCAAAAGGAATCCACTCTTCA 27608
|| | ||||||||||||||||||||
Sbjct 252557 AACATTCAAAAGGAATCCACTCTTCA 252582
>seq158
Length=604990
Score = 123 bits (136), Expect = 3e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| | || || ||||| ||||| | || || |||||
Sbjct 572523 ATGCAGATTTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGAGTCCTCC 572464
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | || | || || || |||||||| |||||||| ||||||||
Sbjct 572463 GACACCATTGATAATGTCAAATCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCAA 572404
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | ||||| |||||||||||| | || |||| | || | || ||||| ||
Sbjct 572403 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGGCTGACTACAAC 572344
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
||||||||||||||||||||||
Sbjct 572343 ATCCAAAAGGAATCCACTCTTCA 572321
>seq147
Length=818043
Score = 118 bits (130), Expect = 1e-21
Identities = 255/379 (67%), Gaps = 2/379 (1%)
Strand=Plus/Plus
Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438
||||| |||| |||||| | |||||| ||| ||||| | | |||||| ||||||||
Sbjct 277795 CCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAATACCCTGACCATAGGAATGATACCG 277854
Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGA 81497
| || |||||| ||||| | || | || | | | ||| || ||
Sbjct 277855 TTGGAAGTACCGTTAGTACCAGCAATGTAAGCACCAGTACTTCTAATATTGTGAATGTGC 277914
Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557
|| ||| || ||||| | | ||| |||||| ||||| |||| ||| || |||||
Sbjct 277915 AA-ACCAATACCACCAGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTGTCGTAAAT 277973
Query 81558 TCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTT 81617
|| ||||| || | |||||| | | ||||||||| ||||||||||| |||
Sbjct 277974 ACCATCGATAGAGTCATCCTTCATGGCCACCAAGAAACAAGACGACATCTGAGGACTTGG 278033
Query 81618 TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTC 81677
| || |||||||||| ||||| | | ||||| |||| || | | ||||| |||
Sbjct 278034 AGTACCAGCATTGAACAAGGTTGGAGACCCGTGAGTGAAGTATCTTTGAGACATGTGGTT 278093
Query 81678 ATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAA 81737
||||| || |||| | ||| ||||||||||| ||||| | ||| || | ||| |
Sbjct 278094 GTAGGTCTCAATGACCTTTTCAATGTCGTCACCGTGGATACCAACAGCAACTCTCATGAT 278153
Query 81738 CATGTACTGGGGCGTCTCG 81756
|| || || || |||||
Sbjct 278154 CAAGTGTTGTGGTCTCTCG 278172
Score = 91.5 bits (100), Expect = 2e-13
Identities = 110/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 80908 GACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCAC 80967
|| |||| || || ||||| || ||||||| |||| | || || ||||| |||
Sbjct 277321 GAAGCCAAGTTACAGACGGCAACTTCTTCAGGGTCTGAGTATTCAACAATTTCACAACAC 277380
Query 80968 AAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCC 81027
|| |||||||| || || |||||| ||| || || || | ||| ||| |||||||||
Sbjct 277381 AAGTTAGAAGATTTGATGATACCCAAGTTCTTTTGATTGGTCTTCTTGTTACAAGCGTCC 277440
Query 81028 TTGTAGCACATGTACGGGGTACCGGTCTCG 81057
||||| ||||| | || |||||||| |||
Sbjct 277441 TTGTACAACATGAAAGGAGTACCGGTTTCG 277470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309038383920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |