Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq180 131 2e-25 seq158 123 3e-23 seq147 118 1e-21 >seq180 Length=546618 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | ||||| ||||| || ||| | || ||||| || Sbjct 252836 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252895 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | || | || ||||| |||||||| |||||||| ||||||||| Sbjct 252896 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAG 252955 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || || ||||||||| | || |||| | | || | || || || || Sbjct 252956 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGATGGTAGAACTTTGGCTGATTACAAC 253015 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | ||||||||||| || ||||| | |||||| | | | |||||||| Sbjct 253016 ATTCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGACA 253065 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | ||||| ||||| || ||| | || ||||| || Sbjct 252608 ATGCAAATTTTCGTCAAGACCTTGACCGGTAAGACCATCACTTTGGAAGTTGAATCTTCC 252667 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | || | || ||||| |||||||| |||||||| |||||||| Sbjct 252668 GACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGACCAA 252727 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || || ||||||||| | || || | | | || | || || || || Sbjct 252728 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTACAAC 252787 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | |||||||||||||||||||| Sbjct 252788 ATTCAAAAGGAATCCACTCTTCA 252810 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 ||||||||||| || || || || | || || ||||| || ||| | || ||||| || Sbjct 252377 ATAATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCT 252436 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | ||||| ||| | || | || ||||| |||||||| |||||||| |||||| Sbjct 252437 TCCGACACCATTGACAATGTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGAC 252496 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || || | | || || || ||||||||| | || || | | | || | || || || Sbjct 252497 CAACAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTAC 252556 Query 27583 AATGTCCAAAAGGAATCCACTCTTCA 27608 || | |||||||||||||||||||| Sbjct 252557 AACATTCAAAAGGAATCCACTCTTCA 252582 >seq158 Length=604990 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| | || || ||||| ||||| | || || ||||| Sbjct 572523 ATGCAGATTTTCGTTAAGACCTTGACTGGTAAGACCATTACCTTGGAAGTCGAGTCCTCC 572464 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | || | || || || |||||||| |||||||| |||||||| Sbjct 572463 GACACCATTGATAATGTCAAATCCAAGATCCAAGACAAGGAAGGAATTCCACCAGACCAA 572404 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | ||||| |||||||||||| | || |||| | || | || ||||| || Sbjct 572403 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGGCTGACTACAAC 572344 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||||||||||||||||||||| Sbjct 572343 ATCCAAAAGGAATCCACTCTTCA 572321 >seq147 Length=818043 Score = 118 bits (130), Expect = 1e-21 Identities = 255/379 (67%), Gaps = 2/379 (1%) Strand=Plus/Plus Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438 ||||| |||| |||||| | |||||| ||| ||||| | | |||||| |||||||| Sbjct 277795 CCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAATACCCTGACCATAGGAATGATACCG 277854 Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGA 81497 | || |||||| ||||| | || | || | | | ||| || || Sbjct 277855 TTGGAAGTACCGTTAGTACCAGCAATGTAAGCACCAGTACTTCTAATATTGTGAATGTGC 277914 Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557 || ||| || ||||| | | ||| |||||| ||||| |||| ||| || ||||| Sbjct 277915 AA-ACCAATACCACCAGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTGTCGTAAAT 277973 Query 81558 TCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTT 81617 || ||||| || | |||||| | | ||||||||| ||||||||||| ||| Sbjct 277974 ACCATCGATAGAGTCATCCTTCATGGCCACCAAGAAACAAGACGACATCTGAGGACTTGG 278033 Query 81618 TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTC 81677 | || |||||||||| ||||| | | ||||| |||| || | | ||||| ||| Sbjct 278034 AGTACCAGCATTGAACAAGGTTGGAGACCCGTGAGTGAAGTATCTTTGAGACATGTGGTT 278093 Query 81678 ATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAA 81737 ||||| || |||| | ||| ||||||||||| ||||| | ||| || | ||| | Sbjct 278094 GTAGGTCTCAATGACCTTTTCAATGTCGTCACCGTGGATACCAACAGCAACTCTCATGAT 278153 Query 81738 CATGTACTGGGGCGTCTCG 81756 || || || || ||||| Sbjct 278154 CAAGTGTTGTGGTCTCTCG 278172 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 80908 GACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCAC 80967 || |||| || || ||||| || ||||||| |||| | || || ||||| ||| Sbjct 277321 GAAGCCAAGTTACAGACGGCAACTTCTTCAGGGTCTGAGTATTCAACAATTTCACAACAC 277380 Query 80968 AAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCC 81027 || |||||||| || || |||||| ||| || || || | ||| ||| ||||||||| Sbjct 277381 AAGTTAGAAGATTTGATGATACCCAAGTTCTTTTGATTGGTCTTCTTGTTACAAGCGTCC 277440 Query 81028 TTGTAGCACATGTACGGGGTACCGGTCTCG 81057 ||||| ||||| | || |||||||| ||| Sbjct 277441 TTGTACAACATGAAAGGAGTACCGGTTTCG 277470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309038383920