Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq158 114 8e-21 seq180 109 3e-19 >seq158 Length=604990 Score = 114 bits (126), Expect = 8e-21 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 |||||||| || |||||| |||||||| ||||| || || | | |||| | ||| Sbjct 572312 AACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGCCAAAGTTCTTCCATCT 572371 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | ||| ||||| || || || || | |||||||| || || | ||| ||||||||| Sbjct 572372 TCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTCT 572431 Query 34615 GTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGT 34673 |||||| | ||| || || ||| ||||| | ||| ||||||| ||| || || Sbjct 572432 TGGATCTTG-GATTTGACATTATCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGT 572490 Query 34674 TTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATT 34713 ||||| || || || || || ||||||||||| ||| || Sbjct 572491 CTTACCAGTCAAGGTCTTAACGAAAATCTGCATCTTGGTT 572530 >seq180 Length=546618 Score = 109 bits (120), Expect = 3e-19 Identities = 170/239 (71%), Gaps = 3/239 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||| ||||| || |||||| |||||||||||||| ||||| | Sbjct 252606 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 252547 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| ||||||| | ||| |||||||| || || || | |||||||| || || Sbjct 252546 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGA 252487 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||| ||||||||| ||| || | ||| || | ||| ||||| || || Sbjct 252486 ATTCCTTCCTTGTCT-TGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 252428 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGTAT 34717 ||||| || || || ||||| || || ||||| || ||||| ||||| ||| ||||| Sbjct 252427 TTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCATTATGA-TGTAT 252370 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||| ||||| || |||||| |||||||||||||| ||||| | Sbjct 252834 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 252775 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| ||||||| | ||| |||||||| || || || | |||||||| || || Sbjct 252774 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGA 252715 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||| ||||||||| ||| || | ||| || | ||| ||||| || || Sbjct 252714 ATTCCTTCCTTGTCT-TGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 252656 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || |||||||| || || || || ||||| ||||| Sbjct 252655 TTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252608 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||| ||||| || || || |||||||||||||| ||||| | Sbjct 253062 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGCC 253003 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | ||||| | ||| |||||||| || || || | || ||||| || || Sbjct 253002 AAAGTTCTACCATCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGA 252943 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||| ||||||||| ||| || | ||| || | ||| ||||| || || Sbjct 252942 ATTCCTTCCTTGTCT-TGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 252884 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || |||||||| || || || || ||||| ||||| Sbjct 252883 TTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728867368503