Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017-
04-25] 191 sequences; 10,912,061 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq158 114 8e-21
seq180 109 3e-19
>seq158
Length=604990
Score = 114 bits (126), Expect = 8e-21
Identities = 159/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554
|||||||| || |||||| |||||||| ||||| || || | | |||| | |||
Sbjct 572312 AACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGCCAAAGTTCTTCCATCT 572371
Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614
|| | ||| ||||| || || || || | |||||||| || || | ||| |||||||||
Sbjct 572372 TCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTCT 572431
Query 34615 GTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGT 34673
|||||| | ||| || || ||| ||||| | ||| ||||||| ||| || ||
Sbjct 572432 TGGATCTTG-GATTTGACATTATCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGT 572490
Query 34674 TTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATT 34713
||||| || || || || || ||||||||||| ||| ||
Sbjct 572491 CTTACCAGTCAAGGTCTTAACGAAAATCTGCATCTTGGTT 572530
>seq180
Length=546618
Score = 109 bits (120), Expect = 3e-19
Identities = 170/239 (71%), Gaps = 3/239 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || |||||| |||||||||||||| ||||| |
Sbjct 252606 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 252547
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| ||||||| | ||| |||||||| || || || | |||||||| || ||
Sbjct 252546 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGA 252487
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||||||| ||| || | ||| || | ||| ||||| || ||
Sbjct 252486 ATTCCTTCCTTGTCT-TGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 252428
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGTAT 34717
||||| || || || ||||| || || ||||| || ||||| ||||| ||| |||||
Sbjct 252427 TTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCATTATGA-TGTAT 252370
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || |||||| |||||||||||||| ||||| |
Sbjct 252834 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 252775
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| ||||||| | ||| |||||||| || || || | |||||||| || ||
Sbjct 252774 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGA 252715
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||||||| ||| || | ||| || | ||| ||||| || ||
Sbjct 252714 ATTCCTTCCTTGTCT-TGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 252656
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| || || || |||||||| || || || || ||||| |||||
Sbjct 252655 TTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252608
Score = 89.7 bits (98), Expect = 3e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || || || |||||||||||||| ||||| |
Sbjct 253062 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGCC 253003
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | ||||| | ||| |||||||| || || || | || ||||| || ||
Sbjct 253002 AAAGTTCTACCATCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGA 252943
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||||||| ||| || | ||| || | ||| ||||| || ||
Sbjct 252942 ATTCCTTCCTTGTCT-TGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 252884
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| || || || |||||||| || || || || ||||| |||||
Sbjct 252883 TTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314728867368503
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |