Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq180 86.0 4e-12 >seq180 Length=546618 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||||||||| || |||||| | ||||| || || || | || || ||| | Sbjct 252379 AATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTC 252438 Query 27849 CGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 |||| || ||||| |||||| || || ||||| ||||| |||| || Sbjct 252439 CGACACCATTGACAAT--GTCAAATCCAAGATTCAAGACAAGGAAGGAATTCCACCAGAC 252496 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966 || ||| | || || || ||||| || |||||||| |||| | | ||| | |||||| Sbjct 252497 CAACAAAGATTGATCTTCGCCGGTAAGCAATTGGAAGACGGTAGAACTTTGGCTGATTAC 252556 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||| ||||| || |||| | || ||||||||| | ||| | || || Sbjct 252557 AACATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 252606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355861571619057