Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq180 179 9e-40 seq158 167 6e-36 seq11 105 2e-17 seq109 91.5 4e-13 >seq180 Length=546618 Score = 179 bits (198), Expect = 9e-40 Identities = 170/217 (78%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| ||||||||||| ||||| | |||||||| ||||||||||| || Sbjct 252595 TCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACC 252536 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | ||||| || |||||||| | || ||||||||| || ||||| |||||||| Sbjct 252535 GTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTT 252476 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| || ||| || |||||||| || | ||| || || || ||||| Sbjct 252475 GTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGAT 252416 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || ||||||||||| | ||| | ||||||| Sbjct 252415 GGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCATT 252379 Score = 168 bits (186), Expect = 2e-36 Identities = 167/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| ||||||||||| ||||| | |||||||| ||||||||||| || Sbjct 252823 TCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACC 252764 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | ||||| || |||||||| | || ||||||||| || ||||| |||||||| Sbjct 252763 GTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTT 252704 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| || ||| || |||||||| || | ||| || || || ||||| Sbjct 252703 GTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGAT 252644 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||| || || | ||| | |||||| Sbjct 252643 GGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252608 Score = 165 bits (182), Expect = 2e-35 Identities = 166/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| || || ||||| ||||| | |||||||| ||||||||||| || Sbjct 253051 TCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACC 252992 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | ||||| || |||||||| | || ||| ||||| || ||||| |||||||| Sbjct 252991 ATCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGAATTCCTTCCTT 252932 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| || ||| || |||||||| || | ||| || || || ||||| Sbjct 252931 GTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGAT 252872 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||| || || | ||| | |||||| Sbjct 252871 GGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252836 >seq158 Length=604990 Score = 167 bits (184), Expect = 6e-36 Identities = 161/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| ||||||||||| ||||||| ||||| || ||||||||||| |||||||| | || Sbjct 572320 GTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGCCAAAGTTCTTCCATCTTCCAATTG 572379 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| |||||||| || | || ||||||||| || ||||| |||||||||||||||||||| Sbjct 572380 CTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTT 572439 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || ||| || |||||||| |||| || || || || || || ||||| || || Sbjct 572440 GGATTTGACATTATCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTACCAGT 572499 Query 225690 CAAAGTTTTTATGAACACTTGCATTTT 225716 ||| || || | ||| | ||||| || Sbjct 572500 CAAGGTCTTAACGAAAATCTGCATCTT 572526 >seq11 Length=437420 Score = 105 bits (116), Expect = 2e-17 Identities = 88/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| |||||||||||||||||||| |||||||| || || |||||||| ||||||||||| Sbjct 243649 GAAAATTTGACCATCAGTAATAGAAATAACATTGGTTGGAATATAAGCGGAAACATCACC 243590 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAA 4577 |||| ||||| | ||| || || || || | || |||||||| || Sbjct 243589 ACCTTGGGTTTCAATAACTGGCAAAGCAGTCAAAGAACCACCACCCAA 243542 Score = 84.2 bits (92), Expect = 5e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 5022 CAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATGGTAAA 5081 |||||| |||| || | ||| ||||||| ||| || |||| || ||||| || || || Sbjct 243323 CAATACATTGCTCCTTTCACTGGTTGTGCTATTGGTGAATGGTTCAGAGACAACGGAAAG 243382 Query 5082 CATGCTTTAATCATCTACGATGATTT 5107 |||||||| ||||||||||||||||| Sbjct 243383 CATGCTTTGATCATCTACGATGATTT 243408 >seq109 Length=41861 Score = 91.5 bits (100), Expect = 4e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620 || ||||| |||| | ||||| ||| |||||||||||| || |||||||| || | Sbjct 4612 AATGTTATGGTTACTGGTCATGCTATTGCTATGATTTTCTTATTCGTTATGCCTATTTTA 4553 Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTT 7680 || || |||| || |||| || || ||| | | || |||||| ||||||||||| Sbjct 4552 ATTGGTAGTTTTGGTAATTTCTTTGTACCTATCTTAATAGGTGCTGTAGATATGGCTTTC 4493 Query 7681 CCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTT 7728 | || | || ||||| |||||||||| |||| ||| | ||| || Sbjct 4492 GCTAGATTAAATAATATTAGTTTTTGATGTTTACCTCCTGCTTTAGTT 4445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192528281652554