Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017-
04-25] 191 sequences; 10,912,061 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq180 179 9e-40
seq158 167 6e-36
seq11 105 2e-17
seq109 91.5 4e-13
>seq180
Length=546618
Score = 179 bits (198), Expect = 9e-40
Identities = 170/217 (78%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| ||||||||||| ||||| | |||||||| ||||||||||| ||
Sbjct 252595 TCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACC 252536
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| || |||||||| | || ||||||||| || ||||| ||||||||
Sbjct 252535 GTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTT 252476
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| ||||| || ||| || |||||||| || | ||| || || || |||||
Sbjct 252475 GTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGAT 252416
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
||||| || ||||||||||| | ||| | |||||||
Sbjct 252415 GGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCATT 252379
Score = 168 bits (186), Expect = 2e-36
Identities = 167/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| ||||||||||| ||||| | |||||||| ||||||||||| ||
Sbjct 252823 TCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACC 252764
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| || |||||||| | || ||||||||| || ||||| ||||||||
Sbjct 252763 GTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTT 252704
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| ||||| || ||| || |||||||| || | ||| || || || |||||
Sbjct 252703 GTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGAT 252644
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || ||||| || || | ||| | ||||||
Sbjct 252643 GGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252608
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| || || ||||| ||||| | |||||||| ||||||||||| ||
Sbjct 253051 TCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACC 252992
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| || |||||||| | || ||| ||||| || ||||| ||||||||
Sbjct 252991 ATCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGAATTCCTTCCTT 252932
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| ||||| || ||| || |||||||| || | ||| || || || |||||
Sbjct 252931 GTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGAT 252872
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || ||||| || || | ||| | ||||||
Sbjct 252871 GGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252836
>seq158
Length=604990
Score = 167 bits (184), Expect = 6e-36
Identities = 161/207 (78%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569
||| ||||||||||| ||||||| ||||| || ||||||||||| |||||||| | ||
Sbjct 572320 GTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGCCAAAGTTCTTCCATCTTCCAATTG 572379
Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629
||| |||||||| || | || ||||||||| || ||||| ||||||||||||||||||||
Sbjct 572380 CTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTT 572439
Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| ||| || |||||||| |||| || || || || || || ||||| || ||
Sbjct 572440 GGATTTGACATTATCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTACCAGT 572499
Query 225690 CAAAGTTTTTATGAACACTTGCATTTT 225716
||| || || | ||| | ||||| ||
Sbjct 572500 CAAGGTCTTAACGAAAATCTGCATCTT 572526
>seq11
Length=437420
Score = 105 bits (116), Expect = 2e-17
Identities = 88/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| |||||||||||||||||||| |||||||| || || |||||||| |||||||||||
Sbjct 243649 GAAAATTTGACCATCAGTAATAGAAATAACATTGGTTGGAATATAAGCGGAAACATCACC 243590
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAA 4577
|||| ||||| | ||| || || || || | || |||||||| ||
Sbjct 243589 ACCTTGGGTTTCAATAACTGGCAAAGCAGTCAAAGAACCACCACCCAA 243542
Score = 84.2 bits (92), Expect = 5e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 5022 CAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATGGTAAA 5081
|||||| |||| || | ||| ||||||| ||| || |||| || ||||| || || ||
Sbjct 243323 CAATACATTGCTCCTTTCACTGGTTGTGCTATTGGTGAATGGTTCAGAGACAACGGAAAG 243382
Query 5082 CATGCTTTAATCATCTACGATGATTT 5107
|||||||| |||||||||||||||||
Sbjct 243383 CATGCTTTGATCATCTACGATGATTT 243408
>seq109
Length=41861
Score = 91.5 bits (100), Expect = 4e-13
Identities = 121/168 (72%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620
|| ||||| |||| | ||||| ||| |||||||||||| || |||||||| || |
Sbjct 4612 AATGTTATGGTTACTGGTCATGCTATTGCTATGATTTTCTTATTCGTTATGCCTATTTTA 4553
Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTT 7680
|| || |||| || |||| || || ||| | | || |||||| |||||||||||
Sbjct 4552 ATTGGTAGTTTTGGTAATTTCTTTGTACCTATCTTAATAGGTGCTGTAGATATGGCTTTC 4493
Query 7681 CCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTT 7728
| || | || ||||| |||||||||| |||| ||| | ||| ||
Sbjct 4492 GCTAGATTAAATAATATTAGTTTTTGATGTTTACCTCCTGCTTTAGTT 4445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192528281652554
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |