Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq147 403 2e-107 >seq147 Length=818043 Score = 403 bits (446), Expect = 2e-107 Identities = 1209/1848 (65%), Gaps = 41/1848 (2%) Strand=Plus/Plus Query 76820 ATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTT 76879 ||||||||||||||| || |||||| |||| |||||||| ||||| |||| ||| Sbjct 276441 ATAGTACATACCAGTCTTAAGACCCTTCTTCCAACCGTAGAAGTGCATTGAGGTCAATTT 276500 Query 76880 GGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCC 76939 | || || || |||||||||| || || |||||| |||||||| | Sbjct 276501 ACCCATTGTTGGGTCCTTGATGTGAATATTCAAGGATTGGGATTGATCAATGAAAGCAGC 276560 Query 76940 TCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAAC 76999 ||| || || ||||| | || || ||||| | |||||||| | || || | | Sbjct 276561 TCTGTCGGCGGCCATGTCGATGATATGTTTTTGGGAGATTTCCCATACCGTCTTATACAA 276620 Query 77000 TTGTTTGATATCATCTGGAAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAAT 77056 ||||| |||||||| | ||| || | |||||||||||| | ||| || || Sbjct 276621 AGCCTTGATTTCATCTGGGATGTTGGTCAAACCTTGAATGGAACCGTTGTTTGAAATGAT 276680 Query 77057 TGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGG 77116 | || || || || ||||| | | || ||| | | | | | || Sbjct 276681 GTTGTTTTTCATGGATTCGTTCCAAAGACCCAAATCAACCAAATCCTTCAACAAGTATGG 276740 Query 77117 ATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGG 77176 ||||| ||||| |||||||| ||||| ||||| | || ||| || ||| |||||||| Sbjct 276741 GTTAACAATTTGGAATTCTCCTGACAACACTCTTCTAGAGTACATGTTAGAAGTATATGG 276800 Query 77177 TTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCAC 77236 ||| | | |||| ||||| ||||| ||||||| ||||||||||||||||||||| || || Sbjct 276801 TTCGAAACATTCGTTGTTACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATAGGAGCAAC 276860 Query 77237 CAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCA 77296 ||| || ||||| | ||||||| || || | || | | | ||| ||||| Sbjct 276861 CAACAATGAGTTTCTTAAACCATGTTGGGCCATCTTTTGCTTCAAAGTATCCCAGTCCCA 276920 Query 77297 AAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGA 77356 | || | || | ||| | ||||||||| | | || | | ||| || Sbjct 276921 TAATTCGGTTGGCTTTCTGTTCCACAAATCGTATTGCAACAAACCTTGAGAAGCTGGAGA 276980 Query 77357 TCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGC 77416 || | || | ||| ||||| ||||| | | || | |||| | ||||| | || Sbjct 276981 ACCTTCGTAGGATTCGTAAGGACCTTCGATAACTGCCAATTCAATAGAGGCTTCAACAGC 277040 Query 77417 TCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAA 77476 |||| || || |||||||| || | |||| | || | ||||| | || || Sbjct 277041 ACCGTGGTAGATGGTTTCGAAGATTTGAATATTTAATTCCTTGGCTTCTTGAGAGTCGAA 277100 Query 77477 CGGATAATGTAAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTC 77535 || |||| | |||| || || | ||| || || || || || || | | |||| |||| Sbjct 277101 TGG-TAATCTCAAAGCCATGAAAGTATCAGCCAAACCTTGGACACCCAAAGCAATTGGTC 277159 Query 77536 TATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTT 77595 | | || ||||||| || ||| || |||| || || | || |||| || ||| Sbjct 277160 TGTTCTTCATATTGGATCTTCTAGACTCAGGAACTGGGTAGAAGTTTCTGTCAATGATTC 277219 Query 77596 TATTGAGATTTCTAACAACTACTTTAACCACGTC------CTTT----AGTTTAAGAAAA 77645 | || | ||||| || || ||| | || |||| |||| | || Sbjct 277220 TGTTCAAGTTTCTGGTGACAACCTTAGAAATTTCGTGCAACTTTTCGAAGTTGTACCAAG 277279 Query 77646 TCAAATCTTCCATCTAT---AACAAAC-ATGTTCAAAGCTATAGATGCTAGATTACAAAC 77701 | | | ||| ||| | |||||| ||| | ||||| ||||| || | ||||| || Sbjct 277280 TGGAGTTTTC-ATCGGTTTCAACAAAAGATGGT-AAAGCAATAGAAGCCAAGTTACAGAC 277337 Query 77702 TGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGAT 77761 || || || | || || | |||| | || || ||| | ||| | ||||||| Sbjct 277338 GGCAACTTCTTCAGGGTCTGAGTATTCAACAATTTCACAACACAAGTTAGAAGATTTGAT 277397 Query 77762 AGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGG 77821 | |||| || | ||| ||| |||| || || || | |||||| || | || || || Sbjct 277398 GATACCCAAGTTCTTTTGATTGGTCTTCTTGTTACAAGCGTCCTTGTACAACATGAAAGG 277457 Query 77822 AGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACT-CTAG-CTTTTATC 77879 ||| |||||||| | || | ||| | ||| | | ||| | ||| || | |||| || Sbjct 277458 AGTACCGGTTTCGGTTTGAGCTTCCAAAATTGCGTACCACA--ACTTCTGGGCTTTGAT- 277514 Query 77880 ATAGATTTGTATCGCCTCTCT-----CTTTCATATTGA--GTATATAGCCGTTCAAATTC 77932 | ||||| | ||||| | ||||| |||| ||| | || | | ||||| Sbjct 277515 ---GGTTTGTCTA-CCTCTATTTTCACTTTCGTATTTCTCGTACAAAGTCTTG--AATTC 277568 Query 77933 ATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACC 77992 ||| || |||||||| | || || ||| ||||||||| | | ||| | ||||||||| Sbjct 277569 ATCACCATAAACATCAGCTAAACCTGGGGCTTCATTTGGAGAGAACAAAGTCCAGTCACC 277628 Query 77993 ATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 78052 || | | ||||| || |||||| | ||| || ||||| | || || | ||||| Sbjct 277629 ATTCTTTTCAACTCTTTCCATAAACAAATCTGGAATCCACAAGGCTGGGAACAAATCTCT 277688 Query 78053 GGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGA 78112 || ||| |||||| ||||| ||||||| | | |||| || || | |||||| || Sbjct 277689 GGCTCTGATTTCTTCTTTTCCGTGATTCTTTCTGATGTCGATGAAGTCGAAAATATCGGA 277748 Query 78113 ATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTAT 78172 |||||||| |||| || | || | | | ||||||| || ||||| || || || | Sbjct 277749 GTGCCATGGCTCTAAGTACAAGGCAAAAGCACCAGGTCTCTTGTTACCACCTTGGTCGAC 277808 Query 78173 ATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATT 78232 |||||||| ||||| || | || || | ||| ||||| |||||||| || || || || Sbjct 277809 GTATCTGGCAGTGTTGTTGAATACCCTGACCATAGGAATGATACCGTTGGAAGTACCGTT 277868 Query 78233 TGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCC 78292 || |||| ||| ||| ||| | | |||||| |||| | || || || || Sbjct 277869 AGTACCAGCAATGTAAGCACCAGTACTTCTAATATTGTGAATGTGCAAACCAATACCACC 277928 Query 78293 TGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTC 78352 || |||| || || | || || ||||| || ||||| ||||| || ||| ||| Sbjct 277929 AGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTGTCGTAAATACCATCGATAGAGTC 277988 Query 78353 ATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAA 78412 |||| ||||| | | ||||| ||||| ||| || ||| || ||||| || Sbjct 277989 ATCCTTCATGGCCACCAAGAAACAAGACGACATCTGAGGACTTGGAGTACCAGCATTGAA 278048 Query 78413 TAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGC 78472 || || ||||| | || || || || ||| ||| | | ||||| || ||||| | Sbjct 278049 CAAGGTTGGAGACCCGTGAGTGAAGTATCTTTGAGACATGTGGTTGTAGGTCTCAATGAC 278108 Query 78473 TGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTC 78531 ||| ||||| || | || || || || || || | ||| | || || || |||| Sbjct 278109 CTTTTCAATGTCGTCACCG-TGGATACCAACAGCAACTCTCATGATCAAGTGTTGTGGTC 278167 Query 78532 TTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAA 78591 | || || ||| | |||| ||||||| || ||| ||||||| || || ||||||| Sbjct 278168 TCTCGGCCACTTTACCGTCTATTCTCAACAAATACGATCTTTCCAAGGTCTTGAAACCAA 278227 Query 78592 AATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTT 78639 |||| ||||| |||||| | ||||| | |||| | || |||| || Sbjct 278228 AATAATTGTAGTTAAAGTCACGGTCGTACACAATAGCCGAGTTTAATT 278275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667141478240