Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq180 132 1e-25 seq158 120 7e-22 >seq180 Length=546618 Score = 132 bits (146), Expect = 1e-25 Identities = 155/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| ||||| || ||||| ||||||||||| || |||||||| |||||||| | Sbjct 253042 CAAG-TGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACCATCTTCCA 252984 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || ||||||||||| | || |||||||| | | ||||||||||| ||||||| Sbjct 252983 ATTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGTGGAATTCCTTCCTTGTCTTGAA 252924 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||||| | || | | |||| ||| || ||||| | ||| || || || | Sbjct 252923 TCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGATGGTCTTAC 252864 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||| ||||| | ||||| Sbjct 252863 CGGTCAAGGTCTTGACGAAAATTTGCAT 252836 Score = 125 bits (138), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| || || ||||| ||||||||||| || |||||||| || ||||| | Sbjct 252586 CAAG-TGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACCGTCTTCCA 252528 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || ||||||||||| | || || ||||| | | ||||||||||| ||||||| Sbjct 252527 ATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGAA 252468 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||||| | || | | |||| ||| || ||||| | ||| || || || | Sbjct 252467 TCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGATGGTCTTAC 252408 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || | ||| || ||||| | |||||| Sbjct 252407 CAGTCAAAGTTTTAACGAAAATTTGCATT 252379 Score = 123 bits (136), Expect = 6e-23 Identities = 153/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| || || ||||| ||||||||||| || |||||||| || ||||| | Sbjct 252814 CAAG-TGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACCGTCTTCCA 252756 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || ||||||||||| | || || ||||| | | ||||||||||| ||||||| Sbjct 252755 ATTGCTTACCGGCGAAGATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGAA 252696 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||||| | || | | |||| ||| || ||||| | ||| || || || | Sbjct 252695 TCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGATGGTCTTAC 252636 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||| ||||| | ||||| Sbjct 252635 CGGTCAAGGTCTTGACGAAAATTTGCAT 252608 >seq158 Length=604990 Score = 120 bits (132), Expect = 7e-22 Identities = 154/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| || || |||||||||||||| || || |||||||| |||||||| | Sbjct 572317 CAAG-TGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGCCAAAGTTCTTCCATCTTCCA 572375 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || ||||| || | || || ||||| | | ||||||||||| ||||| | Sbjct 572376 ATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGA 572435 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||||| | || | | |||| || ||| ||||| | ||||| || || | Sbjct 572436 TCTTGGATTTGACATTATCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTAC 572495 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || | ||||| ||||| | |||||| || Sbjct 572496 CAGTCAAGGTCTTAACGAAAATCTGCATCTT 572526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153817976384161