Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq158 158 3e-33 seq180 156 9e-33 >seq158 Length=604990 Score = 158 bits (174), Expect = 3e-33 Identities = 152/195 (78%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| |||||||||||||||||||| | || | ||||| || | ||| || || || || Sbjct 572332 TTCCTTTTGGATGTTGTAGTCAGCCAAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAA 572391 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | ||||||||| ||||| || ||||||||||||||||| | ||| || | Sbjct 572392 AATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTTGGATTTGACATT 572451 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||| || ||||| || | |||||||| | || || |||||||| ||||| |||||||| Sbjct 572452 ATCAATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTACCAGTCAAGGTCTTAAC 572511 Query 283088 GAATATCTGCATTTT 283102 ||| |||||||| || Sbjct 572512 GAAAATCTGCATCTT 572526 >seq180 Length=546618 Score = 156 bits (172), Expect = 9e-33 Identities = 155/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| |||||||| ||||| | || | || || || | ||| || ||||| || Sbjct 252571 TTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAA 252512 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | ||||||||| ||||| || ||||||||||| ||||| | ||| || | Sbjct 252511 GATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGAATCTTGGATTTGACATT 252452 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| |||| ||| ||||| | |||||| |||||||| |||||||| ||||| Sbjct 252451 GTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTAAC 252392 Query 283088 GAATATCTGCATTTTCATATA 283108 ||| || |||||| | || || Sbjct 252391 GAAAATTTGCATTATGATGTA 252371 Score = 149 bits (164), Expect = 1e-30 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| |||||||| ||||| | || | || || || | ||| || ||||| || Sbjct 252799 TTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACCGTCTTCCAATTGCTTACCGGCGAA 252740 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | ||||||||| ||||| || ||||||||||| ||||| | ||| || | Sbjct 252739 GATCAATCTTTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGAATCTTGGATTTGACATT 252680 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| |||| ||| ||||| | |||||| |||||||| ||||| ||||| || Sbjct 252679 GTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGAC 252620 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 252619 GAAAATTTGCAT 252608 Score = 149 bits (164), Expect = 1e-30 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| |||||||| ||||| | || | ||||| || | ||| || ||||| || Sbjct 253027 TTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTACCATCTTCCAATTGCTTACCGGCGAA 252968 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | ||| ||||| ||||| || ||||||||||| ||||| | ||| || | Sbjct 252967 GATCAATCTTTGCTGGTCTGGTGGAATTCCTTCCTTGTCTTGAATCTTGGATTTGACATT 252908 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| |||| ||| ||||| | |||||| |||||||| ||||| ||||| || Sbjct 252907 GTCAATGGTGTCGGAAGATTCAACTTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGAC 252848 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 252847 GAAAATTTGCAT 252836 Score = 86.0 bits (94), Expect = 1e-11 Identities = 127/179 (71%), Gaps = 6/179 (3%) Strand=Plus/Plus Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085 || ||||| ||||| | |||||||| |||| || ||||||| || || || |||||| Sbjct 313510 GTTGGGAAACCTTCAACTTGACCGTTAGCAATAGCTCTCATCAAGGTGGATTTACCAGCA 313569 Query 317086 CCATTGGGGCCGCAAAGACCATA---CCGATTTCCCTTCTTCAGATTAAAACGGGTGTTG 317142 ||||| || || || | ||| || | |||| |||||| | || | || ||| Sbjct 313570 CCATTTGGACCACACAAACCGTATCTTCTGTTTC---TCTTCAATCTGAATTGAGTCTTG 313626 Query 317143 TTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 |||| | |||||| |||| || |||| |||||| ||||| | ||| | ||| || || Sbjct 313627 TTCAACAAGATCTTAGCACCGTAAGCCAAAGAGAATTCACAGTTACATAAGTCTTCACC 313685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046736638432914