Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq180 131 1e-25 seq158 111 1e-19 >seq180 Length=546618 Score = 131 bits (144), Expect = 1e-25 Identities = 174/238 (73%), Gaps = 8/238 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| |||||| |||| |||||| ||| |||||||| |||||||| Sbjct 252841 TTGCATACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTA 252782 Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 ||| || |||| | |||| |||| ||||| ||||| |||||||| | || || Sbjct 252781 ATCAGCCAAAGTT--CTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGG 252724 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGG 44279 |||| || | |||||||| || ||||| || || ||| | |||||||||| Sbjct 252723 TCTGGTGGAATTCCTTCCTTGTCTTGAATCTTGGATTTGACATTGT--CAATGGTGTCGG 252666 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || |||| || || ||||| || || | |||||| ||||| |||||||| Sbjct 252665 AAGATTCAACTTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252608 Score = 123 bits (136), Expect = 2e-23 Identities = 175/242 (72%), Gaps = 8/242 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| |||||| |||| |||||| ||| |||||||| |||||||| Sbjct 252613 TTGCATACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTA 252554 Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 ||| || |||| | |||| |||| ||||| ||||| |||||||| | || || Sbjct 252553 ATCAGCCAAAGTT--CTACCGTCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGTTGG 252496 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGG 44279 |||| || | |||||||| || ||||| || || ||| | |||||||||| Sbjct 252495 TCTGGTGGAATTCCTTCCTTGTCTTGAATCTTGGATTTGACATTGT--CAATGGTGTCGG 252438 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339 ||||| || |||| || || ||||| || || | || || ||||| |||||||| | Sbjct 252437 AAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCATTA 252378 Query 44340 TG 44341 || Sbjct 252377 TG 252376 Score = 123 bits (136), Expect = 2e-23 Identities = 169/232 (73%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| ||||||| |||||| |||| |||||| || |||||||| ||||||||||| || Sbjct 253063 TCCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGC 253004 Query 44170 --GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 |||| | | || |||| ||||| ||||| |||||||| | ||||| |||| Sbjct 253003 CAAAGTT--CTACCATCTTCCAATTGCTTACCGGCGAAGATCAATCTTTGCTGGTCTGGT 252946 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATT 44285 || | |||||||| || ||||| || || ||| | |||||||||| |||| Sbjct 252945 GGAATTCCTTCCTTGTCTTGAATCTTGGATTTGACATTGT--CAATGGTGTCGGAAGATT 252888 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || |||| || || ||||| || || | |||||| ||||| |||||||| Sbjct 252887 CAACTTCCAAAGTGATGGTCTTACCGGTCAAGGTCTTGACGAAAATTTGCAT 252836 >seq158 Length=604990 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169 || ||||||| ||| ||||||| |||||| ||| ||||||||||||||||| || || Sbjct 572297 CCACCTCTCAATCTTAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGCC 572356 Query 44170 -GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 |||| | | || |||| ||||| || || || ||||| | || || |||| | Sbjct 572357 AAAGTT--CTTCCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTG 572414 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | | |||||||| || ||||| || | | | |||||||||| ||| || | Sbjct 572415 GAATTCCTTCCTTGTCTTGGATCTTGGATTTGACATTATCAATGGTGTCGGAGGACTCGA 572474 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | |||| ||||| ||||| || || | |||||| ||||| || ||||| Sbjct 572475 CTTCCAAGGTAATGGTCTTACCAGTCAAGGTCTTAACGAAAATCTGCAT 572523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989562009847