Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq3 161 1e-34
>seq3
Length=1361780
Score = 161 bits (178), Expect = 1e-34
Identities = 474/726 (65%), Gaps = 16/726 (2%)
Strand=Plus/Minus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| ||| || || || ||||| ||||| || || || | ||||| || ||||||
Sbjct 15205 TGGTAGTCGGAGACTCGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGAGAGATGTTCTCC 15146
Query 16736 ATGAAATCAAAAGGATTAGT--AGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
||||| || || || || || || || | | || | || || || | | | |
Sbjct 15145 ATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTG--GTGTTGCCGAGAGCAACCAGCA 15088
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853
|| || || ||||| || || || |||||||| | | | |||||| || | ||||
Sbjct 15087 GTCGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGAC 15028
Query 16854 GTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA--T 16911
|| ||||| || |||| || ||||| || |||| || || ||| | |
Sbjct 15027 CACAGGGCAGAGCGTCGGTCAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGT 14968
Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971
|| | | || | || ||| ||| | | || || || | |||||| || ||
Sbjct 14967 CCTCGACAATCTT--CTTGGAGGGTCGGTTCTCGAGGTGAGAGAAGAGCAGACAGGCAAA 14910
Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031
||| || | |||||||||| || || ||||| || || || | ||||||||
Sbjct 14909 GTCGGTGTGCAGACCCTCGTCTCGAGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCAT 14850
Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091
||||| ||||| | ||| || || | |||||| || || || || || ||||||||
Sbjct 14849 GAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCTGAGAAAAAGATACCCTC 14790
Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151
||||| ||||| || || | || ||| | | || | || | || |||||| ||
Sbjct 14789 GACGGCGGCAAAGGCAATGAGCCGCTCGCCAAAGGTGGACTCCTCGTCGGAAATCCACTT 14730
Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA----TA 17207
| |||| ||||| || | ||| ||||| || || || ||||| || || ||
Sbjct 14729 GAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTA 14670
Query 17208 ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267
|||| || ||| |||| | || || || |||||||| || ||| |||| |
Sbjct 14669 GTTTCGCT----CCTTGGGGTCCTTGATGTATGTGTCGATGAGCAGCGAGTAGGTTTCCG 14614
Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327
|||| ||||||||||| ||||| || ||||| ||||| ||| || | || |
Sbjct 14613 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGAGCCTGGA 14554
Query 17328 CTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAA 17387
| || || ||||||| ||| | || || ||||| ||||| |||||| || || || |
Sbjct 14553 CCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTGACGATTCCGTCGGAGGCAGCAAAGA 14494
Query 17388 ACGCCA 17393
| ||||
Sbjct 14493 AGGCCA 14488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545315349920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |