Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3 161 1e-34 >seq3 Length=1361780 Score = 161 bits (178), Expect = 1e-34 Identities = 474/726 (65%), Gaps = 16/726 (2%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| ||| || || || ||||| ||||| || || || | ||||| || |||||| Sbjct 15205 TGGTAGTCGGAGACTCGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGAGAGATGTTCTCC 15146 Query 16736 ATGAAATCAAAAGGATTAGT--AGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||| || || || || || || || | | || | || || || | | | | Sbjct 15145 ATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTG--GTGTTGCCGAGAGCAACCAGCA 15088 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853 || || || ||||| || || || |||||||| | | | |||||| || | |||| Sbjct 15087 GTCGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGAC 15028 Query 16854 GTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA--T 16911 || ||||| || |||| || ||||| || |||| || || ||| | | Sbjct 15027 CACAGGGCAGAGCGTCGGTCAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGT 14968 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971 || | | || | || ||| ||| | | || || || | |||||| || || Sbjct 14967 CCTCGACAATCTT--CTTGGAGGGTCGGTTCTCGAGGTGAGAGAAGAGCAGACAGGCAAA 14910 Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031 ||| || | |||||||||| || || ||||| || || || | |||||||| Sbjct 14909 GTCGGTGTGCAGACCCTCGTCTCGAGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCAT 14850 Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091 ||||| ||||| | ||| || || | |||||| || || || || || |||||||| Sbjct 14849 GAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCTGAGAAAAAGATACCCTC 14790 Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151 ||||| ||||| || || | || ||| | | || | || | || |||||| || Sbjct 14789 GACGGCGGCAAAGGCAATGAGCCGCTCGCCAAAGGTGGACTCCTCGTCGGAAATCCACTT 14730 Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA----TA 17207 | |||| ||||| || | ||| ||||| || || || ||||| || || || Sbjct 14729 GAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTA 14670 Query 17208 ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267 |||| || ||| |||| | || || || |||||||| || ||| |||| | Sbjct 14669 GTTTCGCT----CCTTGGGGTCCTTGATGTATGTGTCGATGAGCAGCGAGTAGGTTTCCG 14614 Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327 |||| ||||||||||| ||||| || ||||| ||||| ||| || | || | Sbjct 14613 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGAGCCTGGA 14554 Query 17328 CTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAA 17387 | || || ||||||| ||| | || || ||||| ||||| |||||| || || || | Sbjct 14553 CCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTGACGATTCCGTCGGAGGCAGCAAAGA 14494 Query 17388 ACGCCA 17393 | |||| Sbjct 14493 AGGCCA 14488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545315349920