Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq3 187 3e-42
>seq3
Length=1361780
Score = 187 bits (206), Expect = 3e-42
Identities = 399/592 (67%), Gaps = 8/592 (1%)
Strand=Plus/Minus
Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190
|| ||| || || ||| ||| ||||||||||||| | ||| | |||||||| || ||
Sbjct 14921 CAGACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGAGAAATGAGCTCGTTGGAGAAGGT 14862
Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 24250
||| |||||||| || || ||||| || ||||| || ||||| || || || || || ||
Sbjct 14861 GAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCTGAGAA 14802
Query 24251 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG---CGCTGTC 24307
|| || || || || || ||||||||||| || | || ||| | || | |||
Sbjct 14801 AAAGATACCCTCGACGGCGGCAAAGGCAATGAGCCGCTCGCCAAAGGTGGACTCCTCGTC 14742
Query 24308 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 24367
|||||||| ||||||| ||||||||||| || | || || || ||||| || ||
Sbjct 14741 GGAAATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 14682
Query 24368 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 24427
|| || || |||||| || || || || | ||||| || || | || ||
Sbjct 14681 GTTGAACAGGTAGTTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATGAGCAGCGAGTA 14622
Query 24428 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGT 24487
||||||| || ||||| || || || || || |||||||| || | |||||||
Sbjct 14621 GGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGG 14562
Query 24488 AATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 24547
| ||| || || | ||||| || | | || || || || |||||||| |||
Sbjct 14561 AGCCTGGACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTGACGATTCCGTCGGAGGC 14502
Query 24548 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGT---TTAT 24603
||||| || |||| || || || || || ||||| | |||| ||| || |
Sbjct 14501 AGCAAAGAAGGCCAGAACGTGAGAGATGAAGAATCGCTCGTC-GTTGTTGAGTCGGTTCT 14443
Query 24604 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 24663
||| || || || || | ||| | || || | ||||| || || ||||| |
Sbjct 14442 CCCAGTCGCCCATGTCCTTGCCGAGATCGATCTCCTCAGCAGTCCAGAAGGAAGCCTCAG 14383
Query 24664 CCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715
|||| || ||||| | |||||| ||||| || || || || || | |||||
Sbjct 14382 CCTTCTTGTACATCTGCCAGATCTCATGGTACTGGATGGGGAAGAGCACAAA 14331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721273453120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |