Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq3 215 7e-51
>seq3
Length=1361780
Score = 215 bits (238), Expect = 7e-51
Identities = 404/591 (68%), Gaps = 6/591 (1%)
Strand=Plus/Minus
Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015
|| ||| || || ||| ||||||||||||||||| | ||| || |||||||| || ||
Sbjct 14921 CAGACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGAGAAATGAGCTCGTTGGAGAAGGT 14862
Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075
||| |||||||| || || ||||| || ||||| || ||||| || || || || || ||
Sbjct 14861 GAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCTGAGAA 14802
Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTC 50132
||||| || || || ||||||||||||| || | ||| ||| | ||| | |||
Sbjct 14801 AAAGATACCCTCGACGGCGGCAAAGGCAATGAGCCGCTCGCCAAAGGTGGACTCCTCGTC 14742
Query 50133 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 50192
|||||||| ||||||| ||||||||||| || | || || || || || |||||
Sbjct 14741 GGAAATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 14682
Query 50193 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 50252
|| || || |||||| || || || || | || || ||||| | || ||
Sbjct 14681 GTTGAACAGGTAGTTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATGAGCAGCGAGTA 14622
Query 50253 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 50312
||||||| || ||||| || || ||||| || |||||||| || | |||||||
Sbjct 14621 GGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGG 14562
Query 50313 AATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGC 50372
| ||| || || | ||||| || | | || || || || |||||||| |||
Sbjct 14561 AGCCTGGACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTGACGATTCCGTCGGAGGC 14502
Query 50373 TGCAAAAAACGCCAATACATGTTTTAT--AAAAT-GTTTTTCGTTGGGTGTTAGTTTATT 50429
||||| || |||| || || || | ||| | | |||||| | | || |
Sbjct 14501 AGCAAAGAAGGCCAGAACGTGAGAGATGAAGAATCGCTCGTCGTTGTTGAGTCGGTTCTC 14442
Query 50430 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 50489
||| || || || || | ||| | || || | ||||| || || ||||| ||
Sbjct 14441 CCAGTCGCCCATGTCCTTGCCGAGATCGATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGC 14382
Query 50490 CTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540
||| || ||||| | |||||| ||||| || ||||| ||||| | |||||
Sbjct 14381 CTTCTTGTACATCTGCCAGATCTCATGGTACTGGATGGGGAAGAGCACAAA 14331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268404952160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |