Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq3 208 1e-48
>seq3
Length=1361780
Score = 208 bits (230), Expect = 1e-48
Identities = 404/593 (68%), Gaps = 10/593 (2%)
Strand=Plus/Minus
Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120
|| ||| || || ||| |||||||||||| |||| | ||| | |||||||| || ||
Sbjct 14921 CAGACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGAGAAATGAGCTCGTTGGAGAAGGT 14862
Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180
||| |||||||| || || ||||| || ||||| || || || || || || || || ||
Sbjct 14861 GAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCTGAGAA 14802
Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT----GT 42236
||||| || || || || ||||||||||| || | ||| ||| || | ||| ||
Sbjct 14801 AAAGATACCCTCGACGGCGGCAAAGGCAATGAGCCGCTCGCCA-AAGGTGGACTCCTCGT 14743
Query 42237 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 42296
| |||||||| ||||||| ||||||||||| || | || || || || || ||||
Sbjct 14742 CGGAAATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGG 14683
Query 42297 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTAT 42356
| || || || |||||| || || || || | ||||| ||||| | || |
Sbjct 14682 CGTTGAACAGGTAGTTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATGAGCAGCGAGT 14623
Query 42357 ACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGG 42416
| |||| || || ||||| || || ||||| || |||||||| || |||||||||
Sbjct 14622 AGGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGG 14563
Query 42417 TAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGG 42476
| |||| || || | ||||| || | | || ||||| || |||||||| ||
Sbjct 14562 GAGCCTGGACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTGACGATTCCGTCGGAGG 14503
Query 42477 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----TTTA 42532
| ||||| || |||| || || || || || |||| || |||| | ||
Sbjct 14502 CAGCAAAGAAGGCCAGAACGTGAGAGATGAAGAATCGCTCGT-CGTTGTTGAGTCGGTTC 14444
Query 42533 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCT 42592
| ||| || || || || | ||| | || || | ||||| || || || ||
Sbjct 14443 TCCCAGTCGCCCATGTCCTTGCCGAGATCGATCTCCTCAGCAGTCCAGAAGGAAGCCTCA 14384
Query 42593 GCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645
||||| || ||||| | |||||| ||||| || || || ||||| | |||||
Sbjct 14383 GCCTTCTTGTACATCTGCCAGATCTCATGGTACTGGATGGGGAAGAGCACAAA 14331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138830873440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |