Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq10 141 6e-29
>seq10
Length=1040050
Score = 141 bits (156), Expect = 6e-29
Identities = 334/500 (67%), Gaps = 27/500 (5%)
Strand=Plus/Plus
Query 25421 CTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTC 25480
|||||| | || ||||||||| ||| ||||| ||||| |||| |||||||| | |||
Sbjct 846390 CTTCAGAGCGTCCACGTGATCCTTGTACACGTGCGCGTCGCCCATGGTGTGGACGAGCTC 846449
Query 25481 TCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGAT 25540
|| || || | || || | || ||||| ||| | ||| ||| ||| ||
Sbjct 846450 GCCGCAGTCCAGATCCGTCACCTGCGCAATCATCCGCGTCAACAGAGCGTACGAGGCAAT 846509
Query 25541 GTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT 25600
||| ||||| ||||| | |||| ||| | |||| |||||| ||||| ||||| || |
Sbjct 846510 GTTGAAGGGCACCCCCAGTCCCAGGTCACAG-GACCGCTGGTACAGCTGGCACGACAGTT 846568
Query 25601 ----------------CTTC--GTCGCTCACGTAAAACTGACACATGGTGTAGCACGGAG 25642
|||| || |||||| |||||||| | ||| ||| ||||
Sbjct 846569 GGCCGCGGTTCTTGTTCTTCTTGTACGACACGTAGAACTGACAGAACATGTGGCAGGGAG 846628
Query 25643 GAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGATGATGCACCTGTCTT 25702
| ||||| || | | || ||||||||| || ||| ||||| | | ||| |
Sbjct 846629 GCAGAGCCATCTTGGAGAGATCCGCAGGGTTCCATGCCGACAGAATGATTCGGCGGTCCT 846688
Query 25703 CTGGGTTGTCCCTGATAA---GATCCGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCG 25759
|||||| ||| | || | | ||||| |||||||||||| ||| ||||
Sbjct 846689 GAGGGTTGGTTTTGAGAGTGTGAATCACC-TGTTT--CAGCTGATCCACGCCCTGGCCCG 846745
Query 25760 AGTAGTCTG-CCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTAC 25818
|||||||| | || |||| |||||||||||||||||| | ||| || || |||||
Sbjct 846746 TGTAGTCTGTGTCGCA-GTCCTTGTACTCTGCTCCGAAATGGCGCCATTGAAAGCCGTAG 846804
Query 25819 ACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTG 25878
|| ||||| || || || ||| | ||| | | || ||| |||| ||| || ||
Sbjct 846805 ACGGGTCCCAGATCGCCTTCTCGTCGGTGGCCCAGTCCGGCCTTTTCCAGAAACTCCTTG 846864
Query 25879 GAACCATTGGCGTCCCAGAT 25898
|| |||||| ||||||||||
Sbjct 846865 GATCCATTGCCGTCCCAGAT 846884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340137417601212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |