Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq10 141 6e-29 >seq10 Length=1040050 Score = 141 bits (156), Expect = 6e-29 Identities = 334/500 (67%), Gaps = 27/500 (5%) Strand=Plus/Plus Query 25421 CTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTC 25480 |||||| | || ||||||||| ||| ||||| ||||| |||| |||||||| | ||| Sbjct 846390 CTTCAGAGCGTCCACGTGATCCTTGTACACGTGCGCGTCGCCCATGGTGTGGACGAGCTC 846449 Query 25481 TCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGAT 25540 || || || | || || | || ||||| ||| | ||| ||| ||| || Sbjct 846450 GCCGCAGTCCAGATCCGTCACCTGCGCAATCATCCGCGTCAACAGAGCGTACGAGGCAAT 846509 Query 25541 GTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT 25600 ||| ||||| ||||| | |||| ||| | |||| |||||| ||||| ||||| || | Sbjct 846510 GTTGAAGGGCACCCCCAGTCCCAGGTCACAG-GACCGCTGGTACAGCTGGCACGACAGTT 846568 Query 25601 ----------------CTTC--GTCGCTCACGTAAAACTGACACATGGTGTAGCACGGAG 25642 |||| || |||||| |||||||| | ||| ||| |||| Sbjct 846569 GGCCGCGGTTCTTGTTCTTCTTGTACGACACGTAGAACTGACAGAACATGTGGCAGGGAG 846628 Query 25643 GAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGATGATGCACCTGTCTT 25702 | ||||| || | | || ||||||||| || ||| ||||| | | ||| | Sbjct 846629 GCAGAGCCATCTTGGAGAGATCCGCAGGGTTCCATGCCGACAGAATGATTCGGCGGTCCT 846688 Query 25703 CTGGGTTGTCCCTGATAA---GATCCGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCG 25759 |||||| ||| | || | | ||||| |||||||||||| ||| |||| Sbjct 846689 GAGGGTTGGTTTTGAGAGTGTGAATCACC-TGTTT--CAGCTGATCCACGCCCTGGCCCG 846745 Query 25760 AGTAGTCTG-CCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTAC 25818 |||||||| | || |||| |||||||||||||||||| | ||| || || ||||| Sbjct 846746 TGTAGTCTGTGTCGCA-GTCCTTGTACTCTGCTCCGAAATGGCGCCATTGAAAGCCGTAG 846804 Query 25819 ACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTG 25878 || ||||| || || || ||| | ||| | | || ||| |||| ||| || || Sbjct 846805 ACGGGTCCCAGATCGCCTTCTCGTCGGTGGCCCAGTCCGGCCTTTTCCAGAAACTCCTTG 846864 Query 25879 GAACCATTGGCGTCCCAGAT 25898 || |||||| |||||||||| Sbjct 846865 GATCCATTGCCGTCCCAGAT 846884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137417601212