Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_005946.1
Length=105903
Score E
Sequences producing significant alignments: (Bits) Value
seq1 82.4 5e-11
>seq1
Length=2434256
Score = 82.4 bits (90), Expect = 5e-11
Identities = 131/183 (72%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 71416 ACGGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCC 71475
|||||||| | ||||||| |||||||||||||||||||| ||||| || || || ||
Sbjct 1009345 ACGGTCATACGCGAGGGAATGGCGTGGGGGTTGATGATGATATCGGGGACAACTCCCTCA 1009286
Query 71476 TTGTCGAAGGGCATGTCCTCCTG-GGTCAGGACAGCTCCGCATGTCCCCTTTTGCGCCGT 71534
||||||||| ||||| || | | | || | || || ||||| || ||||
Sbjct 1009285 GCAGAGAAGGGCATATCCTCGTGTCGATAAGTCA-CACCAATGGTACCCTTCTG-TCCGT 1009228
Query 71535 GA-ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGA 71593
|| || ||||||||||| || |||| ||| | ||| ||| | || | |||||||
Sbjct 1009227 GACGAGAGGCAAACTTGTCTCCAATCTGGGGGATCTTGGTGGTTCGCATTCGGACCTTGA 1009168
Query 71594 CGA 71596
|||
Sbjct 1009167 CGA 1009165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338764618337376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |