Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 5e-11 >seq1 Length=2434256 Score = 82.4 bits (90), Expect = 5e-11 Identities = 131/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 71416 ACGGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCC 71475 |||||||| | ||||||| |||||||||||||||||||| ||||| || || || || Sbjct 1009345 ACGGTCATACGCGAGGGAATGGCGTGGGGGTTGATGATGATATCGGGGACAACTCCCTCA 1009286 Query 71476 TTGTCGAAGGGCATGTCCTCCTG-GGTCAGGACAGCTCCGCATGTCCCCTTTTGCGCCGT 71534 ||||||||| ||||| || | | | || | || || ||||| || |||| Sbjct 1009285 GCAGAGAAGGGCATATCCTCGTGTCGATAAGTCA-CACCAATGGTACCCTTCTG-TCCGT 1009228 Query 71535 GA-ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGA 71593 || || ||||||||||| || |||| ||| | ||| ||| | || | ||||||| Sbjct 1009227 GACGAGAGGCAAACTTGTCTCCAATCTGGGGGATCTTGGTGGTTCGCATTCGGACCTTGA 1009168 Query 71594 CGA 71596 ||| Sbjct 1009167 CGA 1009165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338764618337376