Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq14 91.5 1e-13
seq4 86.0 6e-12
>seq14
Length=605277
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| ||||| ||||| |||| || | || ||||| || || ||||| || || |||
Sbjct 299781 TCCTCAAGCTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 299840
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||| || | |||||| | | | ||||| | | || || || | ||||||
Sbjct 299841 TCCTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAGGACTCAACCTCGAGAGTGATG 299900
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| |||||||| || || || ||||||||||||||
Sbjct 299901 GTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 299935
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/196 (70%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||| | ||| | ||| | ||| | ||| |||||||| || | ||| || |||
Sbjct 298763 CCACCTCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGG-- 298820
Query 94841 ATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
| || ||| || ||||||||||| || ||| | ||||| | || ||||| || || |
Sbjct 298821 AAAGGGTTCGACCGTCCTCCAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGG 298880
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
| ||||| || ||||| | ||| || | ||||||| | ||| ||||||| ||||
Sbjct 298881 GGATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGA 298940
Query 94959 CGTCAATCGTGATGGT 94974
| |||| || |||||
Sbjct 298941 CCTCAAGGGTAATGGT 298956
>seq4
Length=1325655
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| ||||| || ||| | ||||| | || ||||| || || ||||| || || |||
Sbjct 386740 TCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 386681
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || | ||||||| | ||| ||||| | || || |||| |||||
Sbjct 386680 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATA 386621
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || ||||| || || ||||||||||||||
Sbjct 386620 GTCTTACCGGTAAGGGTCTTGACAAAGATCTGCAT 386586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290953439840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |