Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq10 147 3e-31
seq15 140 5e-29
>seq10
Length=1040050
Score = 147 bits (162), Expect = 3e-31
Identities = 196/270 (73%), Gaps = 2/270 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||||||||| || || | ||| ||||||||||||||| || || ||||| ||||| || |
Sbjct 278916 CGCTAAGCGACACCGAAAGAT-TCTTCGAGATAACATTCAGGGTATCACTAAGCCCGCCA 278858
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || || || ||||| || ||||| | || | | |||| || ||||
Sbjct 278857 TCCGACGTCTCGCGCGACGAGGTGGTGTGAAGCGAATTTCCGCCCAGATCTACGAGGAGA 278798
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| | ||| ||||| || | ||||| | |||||| || ||| || |
Sbjct 278797 CCCGAAACGTTCTCAAGTCTTTCCTTGAGTCTGTTATTCGAGATGCTGTCACCTACACTG 278738
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||||||||| || | ||| | ||||| || | || || || |
Sbjct 278737 AGCACGCCAAGCGAAAGACTGTCACTTCTCTTGATGTTGTCTACGCTCTCAAGCGACAGG 278678
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
|||| | |||| |||||||| ||||||
Sbjct 278677 GCCGAACCCTTTACGGTTTTGGTGGTTAAT 278648
>seq15
Length=594222
Score = 140 bits (154), Expect = 5e-29
Identities = 194/269 (72%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||||||||| || || | ||| | | |||||||||||||| || ||||||||||| || |
Sbjct 254087 CGCTAAGCGACACCGAAAGATTT-TGCGAGATAACATCCAGGGTATCACCAAGCCCGCCA 254029
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || || || || || |||||||| | || | | |||| || ||||
Sbjct 254028 TCCGACGTCTTGCGCGACGAGGAGGTGTCAAGCGAATTTCCGCCCAGATCTACGAGGAGA 253969
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| ||||| ||||||| || |||| |||| || || | || || |
Sbjct 253968 CCCGAAACGTTCTGAAGTCCTTCCTCGAGTCCGTCATCCGAGACGCCGTTACTTACACTG 253909
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||||||||| || | ||| | ||||| || | || || || |
Sbjct 253908 AGCACGCCAAGCGAAAGACTGTCACTTCTCTTGATGTTGTCTACGCCCTTAAGCGACAGG 253849
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | |||| ||||| || |||||
Sbjct 253848 GCCGAACCCTTTACGGTTTCGGTGGTTAA 253820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075159770492
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |