Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq24 286 9e-72 seq1 127 5e-24 >seq24 Length=170883 Score = 286 bits (316), Expect = 9e-72 Identities = 1060/1640 (65%), Gaps = 46/1640 (3%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || ||||| | || || | ||||| |||||||| | | || |||||||| || Sbjct 95508 TTTACCCACGCTTCCCCCACCCTCTACAACGCTGGAACCCCCCAGCCCCAGATGTCGTCG 95567 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 || || ||| | || ||||||||||| |||||||| || |||| || || || |||| Sbjct 95568 TGTTTCCTTGTCAACATGAAGGACGACTCCATCGACGGCATCTACGATACCCTCAAGACC 95627 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-C 363725 |||||||| ||||||||| ||| ||||| || ||| | || |||||||| | || | | Sbjct 95628 TGTGCTCTGATTTCCAAGTCTGCTGGCGGTATCGGTCTCTCCATCCACAACATCCGAGCC 95687 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 || | | |||||| |||||| ||| ||| || || | || |||||||| || Sbjct 95688 ACCG-GCTCCTACATTGCCGGCACCAACGGAACCTCCAACGGTATCGTGCCCATGCTGCG 95746 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 ||| | |||| ||||| | ||||| |||||||| || ||||| || || || Sbjct 95747 TGTCTACAACAACACTGCCCGATACGTGGACCAGGGAGGCAACAAGCGACCCGGAGCCTT 95806 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905 ||| ||||| || ||||| || | ||| || || ||||| ||||| || || || Sbjct 95807 TGCCATGTACCTTGAGCCCTGGCACGACGACATCTTCGAGTTCTGCGAGCTGCGAAAGAA 95866 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 | ||||| ||||| | || || || || |||||| || || ||| | | || | Sbjct 95867 CCACGGAAAGGAGGAGATTCGAGCCCGAGACCTGTTCCTGGCCCTGTGGATCCCCGATCT 95926 Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGT 364023 || ||| |||| || || ||| | | | | ||| | ||| | ||||| |||| ||| Sbjct 95927 GTTCATGGAGCGAGTCGA-GCA-GAACGCCGAGTGGACTCTCATGTGCCCCAACGAGTGT 95984 Query 364024 CCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGC-TCTATACGAAAAGTATGAATC 364082 || ||||| ||| || | || ||||| | | || || ||||| |||| || Sbjct 95985 CCCGGTCTGGACGACGTCTACGGCGACGAGT-TCAAGCAGCTGTACGAGCAGTACGAGAA 96043 Query 364083 GGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142 |||||| | ||| || || ||||| |||||||| |||| ||| | || | Sbjct 96044 GGAGGGCCGAGGTCGACGAACCATCCCCGCCCAGAAGCTGTGGTACCACATTCTCGACTG 96103 Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202 |||| ||| | || | |||| ||| | ||||| ||| | |||||||| |||||||| Sbjct 96104 CCAGACCGAGTCCGGTAACCCCTTCATGCTCTACAAGGATGCTTGCAACCGAAAGTCCAA 96163 Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACAC 364262 |||| || |||| || || || || |||||| || ||||||| | || ||| | Sbjct 96164 CCAGAAGAACCTCGGAACCATCAAGTCTTCCAACCTGTGCTGCGAGATTGTCGAGTACTC 96223 Query 364263 CGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA- 364321 ||||||| ||| || || || ||||| || || || || || || | ||||| | Sbjct 96224 TTCTCCCGATGAGGTGGCTGTTTGCAACCTGGCCTCCATTGCCCTGCCCACCTTTGTCAC 96283 Query 364322 --AAGATG-------GTACTTTT--GACCACCAGCATCTTTATGACGTAACCTA--TCAT 364368 ||| | | ||| | ||| | || | || | || | || | |||| Sbjct 96284 TCGAGACGACACCAACTCCTTCTACGACTTCAAGAAGCTGCACGATATCGCCAAAGTCAT 96343 Query 364369 GCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAG 364428 | | | || ||| || |||||||| || || || || |||| || || || Sbjct 96344 TGTGC--GAAACCTCAACGCCATTATCGACCGAAACTACTACCCCGTTCCCGAGGCAAAG 96401 Query 364429 CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTT 364488 || || ||||| ||||| || |||| ||| ||||| ||||| || || ||| || Sbjct 96402 AAGTCCAACATGCGACATCGACCTATTGCTCTGGGTGTTCAGGGTCTGGCCGACACCTTC 96461 Query 364489 ATGATGCTC-AAGA-TGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCT 364546 ||| |||| || | | ||||| || | || || || || | |||||| Sbjct 96462 ATG--GCTCTGCGACTTCCCTTTGAGTCTGCCGAGGCCAAGAAGCTCAACATCCAGATCT 96519 Query 364547 TTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAA 364606 | || || || || | || | || || | || |||| | || Sbjct 96520 TCGAGACCATCTACCACGGAGCCGTCGAGGCCTCTTACGAGATGGCTCTTGAGGACGGTG 96579 Query 364607 AGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGA 364666 ||| || | |||| || ||| || |||| | | |||||||| || |||| Sbjct 96580 CCTACGAGACCTTCCAGGGCTCTCCTGCCTCCAGGGGAGACCTTCAGTTTGACCTGTGGA 96639 Query 364667 ATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATG 364726 | || || || || | | ||| | ||||| || |||| | | |||| | Sbjct 96640 ACGTGACTCCCTCCGAGCTTTGGGAGTGGGACGATCTTAAGGCCAATATCATGAAGACCG 96699 Query 364727 GTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCG 364786 ||| || ||||| || | || ||||||||||| || || || | ||||| |||| Sbjct 96700 GTATGCGAAACTCGCTGCTGGTTGCTCCCATGCCCACCGCCTCCACCTCTCAGATTCTCG 96759 Query 364787 GAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCG 364846 | ||||||||||||||| || | || ||| |||| || || || || ||| | | Sbjct 96760 GCTTCAACGAGTGCTTCGAGCCCTACACCTCCAACATTTACTCTCGACGAGTGCTTGCTG 96819 Query 364847 GAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGG 364906 | || || | | | || || | || ||||||| || || || |||||| Sbjct 96820 GCGAGTTCCAGATTGTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTTGGTCTGTGGA 96879 Query 364907 GTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACAT-TCCAGGA 364965 ||| | |||||||||| ||| | |||| || || || ||||||||||| ||| | Sbjct 96880 ATGAGACCATGAAGAACCGAATCGTGGCCGACAACGGATCCGTGCAGAACATCCCCAACA 96939 Query 364966 T-TTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC---CATGCGAAC 365021 | |||| ||||| ||| | ||| |||||| ||||| ||||| | ||||| Sbjct 96940 TCCCCCAGGAGATC--AAGGACCTGTACCGAACCGTGTGGGAGATTTCGCAGAAGCGAA- 96996 Query 365022 TCTCATTGATATGG----CGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTA 365077 |||| || |||| || |||||||| | | || | | ||| |||||| | | Sbjct 96997 --TCATCGAGATGGCTGCCGACCGATCGCCCTTCATTGACCAGTC----CCAGTCCCTCA 97050 Query 365078 ACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGA 365137 || | ||| | | || ||| | |||||| || |||||||| |||||||| |||| Sbjct 97051 ACATTCACATCAAGGACCCCACCATGGGCAAGCTCACCTCCATGCACTTCTACGGCTGGA 97110 Query 365138 AATCCGGTCTTAAGACAGGT 365157 | ||||| ||||| ||| Sbjct 97111 AGAAGGGTCTCAAGACTGGT 97130 >seq1 Length=2434256 Score = 127 bits (140), Expect = 5e-24 Identities = 509/787 (65%), Gaps = 22/787 (3%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| ||||| | ||||| ||| |||||| || |||| ||| | || || Sbjct 1214093 TTCACACACGCTTCTCCAACCCTGTTCAATGCAGGCACTCCCCGGGGCCAGCTATCGTCC 1214034 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 |||||||| | |||| || || |||||||| || |||| ||||| || || | Sbjct 1214033 TGCTTTCTGGTCGCCATGAGCGAAGACTCCATCGACGGCATCTACGACACTCTCAAAACG 1213974 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA 363726 || || | ||||| |||| ||||| || || ||| | |||||||| | | || Sbjct 1213973 TGCGCCCAAATTTCAAAGACCGCAGGAGGCATAGGTCTGCATATCCACAACATCAGAGCT 1213914 Query 363727 CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786 || || ||| ||| | |||| | || || | ||||||||||| || Sbjct 1213913 AAGGGCACCATCATCACAGGCTCTCAGGGAAAATCCTCAGGCATTGTTCCCATGCTCCGA 1213854 Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846 ||||| | || || || || ||||| ||||| || || ||||| || |||||| Sbjct 1213853 GTGTTCAATAACACAGCCAGATACGTGGACCAAGGCGGCAACAAGCGTCCTGGAGCGTTT 1213794 Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAG-CTCCGGAAAAA 363905 || | || | ||||| ||||| |||||||| || |||||||| || || ||||| Sbjct 1213793 GCAGTCTACTTGGAGCCATGGCATGCGGATATTTTGGA-TTTCTTGAATCTGCGCAAAAA 1213735 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 | ||| |||||| | ||||||||||| || || ||| | |||||| | || | Sbjct 1213734 CCACGGAGCCGAGGAAAACAGAGCACGTGATCTCTTTTACGCATTATGGGTTCCCGATCT 1213675 Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATG-TC 364024 || |||||| | || || ||| |||| ||||| || || || || || || | || Sbjct 1213674 GTTCATGAAGAGAGTCGAAAGAGGCGAGAAATGGTCGCTTTTCTGTCC-CAAAAAGGCTC 1213616 Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACT-ATGTTG--CTCTA-TACGAAAAGTATGAA 364080 | || || | || | |||| ||| || || | | | | | |||||| |||| || Sbjct 1213615 CCGGACTGGCAGACATCTGGG--GAC--CTGATTTCGACCGCAAGTACGAAGAGTACGAG 1213560 Query 364081 TCGGAGGGAAAGGCTCGTAAGAC-----AATTCCCGCACAGAAGCTATGGTTTGCCATCA 364135 || |||| ||| ||| || ||| ||| ||| |||| | || || Sbjct 1213559 TC---TCGAAA-GCT-GTACAACTCGCAAATCGACGCCCAGGAGCTGTTCAAGGCGATTC 1213505 Query 364136 TGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCA 364195 || |||||||| || ||| || | ||| |||| ||||| |||||| | Sbjct 1213504 TGACAAGCCAGATTGAAACTGGAGGCCCGTTCATGCTGTATAAAGACAGCTGCAACGCGA 1213445 Query 364196 AGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTG 364255 | ||||||||| || | || || || || | | ||| || || || |||||| | Sbjct 1213444 AATCCAACCAGAAGAATCTCGGCACCATCAAATCGTCCAATCTGTGCACTGAGATTGTCC 1213385 Query 364256 AATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGT 364315 | ||| | ||||||| ||| || || || ||||| || || | ||||| || | || Sbjct 1213384 AGTACTCGTCTCCCGAAGAGGTGGCTGTTTGCAACCTGGCTTCCGTGGCGCTGCCTGAGT 1213325 Query 364316 TTGTAAA 364322 |||| || Sbjct 1213324 TTGTGAA 1213318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352865234408