Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq24 286 9e-72
seq1 127 5e-24
>seq24
Length=170883
Score = 286 bits (316), Expect = 9e-72
Identities = 1060/1640 (65%), Gaps = 46/1640 (3%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || ||||| | || || | ||||| |||||||| | | || |||||||| ||
Sbjct 95508 TTTACCCACGCTTCCCCCACCCTCTACAACGCTGGAACCCCCCAGCCCCAGATGTCGTCG 95567
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
|| || ||| | || ||||||||||| |||||||| || |||| || || || ||||
Sbjct 95568 TGTTTCCTTGTCAACATGAAGGACGACTCCATCGACGGCATCTACGATACCCTCAAGACC 95627
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-C 363725
|||||||| ||||||||| ||| ||||| || ||| | || |||||||| | || | |
Sbjct 95628 TGTGCTCTGATTTCCAAGTCTGCTGGCGGTATCGGTCTCTCCATCCACAACATCCGAGCC 95687
Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785
|| | | |||||| |||||| ||| ||| || || | || |||||||| ||
Sbjct 95688 ACCG-GCTCCTACATTGCCGGCACCAACGGAACCTCCAACGGTATCGTGCCCATGCTGCG 95746
Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845
||| | |||| ||||| | ||||| |||||||| || ||||| || || ||
Sbjct 95747 TGTCTACAACAACACTGCCCGATACGTGGACCAGGGAGGCAACAAGCGACCCGGAGCCTT 95806
Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905
||| ||||| || ||||| || | ||| || || ||||| ||||| || || ||
Sbjct 95807 TGCCATGTACCTTGAGCCCTGGCACGACGACATCTTCGAGTTCTGCGAGCTGCGAAAGAA 95866
Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965
| ||||| ||||| | || || || || |||||| || || ||| | | || |
Sbjct 95867 CCACGGAAAGGAGGAGATTCGAGCCCGAGACCTGTTCCTGGCCCTGTGGATCCCCGATCT 95926
Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGT 364023
|| ||| |||| || || ||| | | | | ||| | ||| | ||||| |||| |||
Sbjct 95927 GTTCATGGAGCGAGTCGA-GCA-GAACGCCGAGTGGACTCTCATGTGCCCCAACGAGTGT 95984
Query 364024 CCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGC-TCTATACGAAAAGTATGAATC 364082
|| ||||| ||| || | || ||||| | | || || ||||| |||| ||
Sbjct 95985 CCCGGTCTGGACGACGTCTACGGCGACGAGT-TCAAGCAGCTGTACGAGCAGTACGAGAA 96043
Query 364083 GGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142
|||||| | ||| || || ||||| |||||||| |||| ||| | || |
Sbjct 96044 GGAGGGCCGAGGTCGACGAACCATCCCCGCCCAGAAGCTGTGGTACCACATTCTCGACTG 96103
Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202
|||| ||| | || | |||| ||| | ||||| ||| | |||||||| ||||||||
Sbjct 96104 CCAGACCGAGTCCGGTAACCCCTTCATGCTCTACAAGGATGCTTGCAACCGAAAGTCCAA 96163
Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACAC 364262
|||| || |||| || || || || |||||| || ||||||| | || ||| |
Sbjct 96164 CCAGAAGAACCTCGGAACCATCAAGTCTTCCAACCTGTGCTGCGAGATTGTCGAGTACTC 96223
Query 364263 CGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA- 364321
||||||| ||| || || || ||||| || || || || || || | ||||| |
Sbjct 96224 TTCTCCCGATGAGGTGGCTGTTTGCAACCTGGCCTCCATTGCCCTGCCCACCTTTGTCAC 96283
Query 364322 --AAGATG-------GTACTTTT--GACCACCAGCATCTTTATGACGTAACCTA--TCAT 364368
||| | | ||| | ||| | || | || | || | || | ||||
Sbjct 96284 TCGAGACGACACCAACTCCTTCTACGACTTCAAGAAGCTGCACGATATCGCCAAAGTCAT 96343
Query 364369 GCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAG 364428
| | | || ||| || |||||||| || || || || |||| || || ||
Sbjct 96344 TGTGC--GAAACCTCAACGCCATTATCGACCGAAACTACTACCCCGTTCCCGAGGCAAAG 96401
Query 364429 CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTT 364488
|| || ||||| ||||| || |||| ||| ||||| ||||| || || ||| ||
Sbjct 96402 AAGTCCAACATGCGACATCGACCTATTGCTCTGGGTGTTCAGGGTCTGGCCGACACCTTC 96461
Query 364489 ATGATGCTC-AAGA-TGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCT 364546
||| |||| || | | ||||| || | || || || || | ||||||
Sbjct 96462 ATG--GCTCTGCGACTTCCCTTTGAGTCTGCCGAGGCCAAGAAGCTCAACATCCAGATCT 96519
Query 364547 TTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAA 364606
| || || || || | || | || || | || |||| | ||
Sbjct 96520 TCGAGACCATCTACCACGGAGCCGTCGAGGCCTCTTACGAGATGGCTCTTGAGGACGGTG 96579
Query 364607 AGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGA 364666
||| || | |||| || ||| || |||| | | |||||||| || ||||
Sbjct 96580 CCTACGAGACCTTCCAGGGCTCTCCTGCCTCCAGGGGAGACCTTCAGTTTGACCTGTGGA 96639
Query 364667 ATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATG 364726
| || || || || | | ||| | ||||| || |||| | | |||| |
Sbjct 96640 ACGTGACTCCCTCCGAGCTTTGGGAGTGGGACGATCTTAAGGCCAATATCATGAAGACCG 96699
Query 364727 GTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCG 364786
||| || ||||| || | || ||||||||||| || || || | ||||| ||||
Sbjct 96700 GTATGCGAAACTCGCTGCTGGTTGCTCCCATGCCCACCGCCTCCACCTCTCAGATTCTCG 96759
Query 364787 GAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCG 364846
| ||||||||||||||| || | || ||| |||| || || || || ||| | |
Sbjct 96760 GCTTCAACGAGTGCTTCGAGCCCTACACCTCCAACATTTACTCTCGACGAGTGCTTGCTG 96819
Query 364847 GAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGG 364906
| || || | | | || || | || ||||||| || || || ||||||
Sbjct 96820 GCGAGTTCCAGATTGTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTTGGTCTGTGGA 96879
Query 364907 GTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACAT-TCCAGGA 364965
||| | |||||||||| ||| | |||| || || || ||||||||||| ||| |
Sbjct 96880 ATGAGACCATGAAGAACCGAATCGTGGCCGACAACGGATCCGTGCAGAACATCCCCAACA 96939
Query 364966 T-TTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC---CATGCGAAC 365021
| |||| ||||| ||| | ||| |||||| ||||| ||||| | |||||
Sbjct 96940 TCCCCCAGGAGATC--AAGGACCTGTACCGAACCGTGTGGGAGATTTCGCAGAAGCGAA- 96996
Query 365022 TCTCATTGATATGG----CGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTA 365077
|||| || |||| || |||||||| | | || | | ||| |||||| | |
Sbjct 96997 --TCATCGAGATGGCTGCCGACCGATCGCCCTTCATTGACCAGTC----CCAGTCCCTCA 97050
Query 365078 ACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGA 365137
|| | ||| | | || ||| | |||||| || |||||||| |||||||| ||||
Sbjct 97051 ACATTCACATCAAGGACCCCACCATGGGCAAGCTCACCTCCATGCACTTCTACGGCTGGA 97110
Query 365138 AATCCGGTCTTAAGACAGGT 365157
| ||||| ||||| |||
Sbjct 97111 AGAAGGGTCTCAAGACTGGT 97130
>seq1
Length=2434256
Score = 127 bits (140), Expect = 5e-24
Identities = 509/787 (65%), Gaps = 22/787 (3%)
Strand=Plus/Minus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| ||||| | ||||| ||| |||||| || |||| ||| | || ||
Sbjct 1214093 TTCACACACGCTTCTCCAACCCTGTTCAATGCAGGCACTCCCCGGGGCCAGCTATCGTCC 1214034
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
|||||||| | |||| || || |||||||| || |||| ||||| || || |
Sbjct 1214033 TGCTTTCTGGTCGCCATGAGCGAAGACTCCATCGACGGCATCTACGACACTCTCAAAACG 1213974
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA 363726
|| || | ||||| |||| ||||| || || ||| | |||||||| | | ||
Sbjct 1213973 TGCGCCCAAATTTCAAAGACCGCAGGAGGCATAGGTCTGCATATCCACAACATCAGAGCT 1213914
Query 363727 CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786
|| || ||| ||| | |||| | || || | ||||||||||| ||
Sbjct 1213913 AAGGGCACCATCATCACAGGCTCTCAGGGAAAATCCTCAGGCATTGTTCCCATGCTCCGA 1213854
Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846
||||| | || || || || ||||| ||||| || || ||||| || ||||||
Sbjct 1213853 GTGTTCAATAACACAGCCAGATACGTGGACCAAGGCGGCAACAAGCGTCCTGGAGCGTTT 1213794
Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAG-CTCCGGAAAAA 363905
|| | || | ||||| ||||| |||||||| || |||||||| || || |||||
Sbjct 1213793 GCAGTCTACTTGGAGCCATGGCATGCGGATATTTTGGA-TTTCTTGAATCTGCGCAAAAA 1213735
Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965
| ||| |||||| | ||||||||||| || || ||| | |||||| | || |
Sbjct 1213734 CCACGGAGCCGAGGAAAACAGAGCACGTGATCTCTTTTACGCATTATGGGTTCCCGATCT 1213675
Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATG-TC 364024
|| |||||| | || || ||| |||| ||||| || || || || || || | ||
Sbjct 1213674 GTTCATGAAGAGAGTCGAAAGAGGCGAGAAATGGTCGCTTTTCTGTCC-CAAAAAGGCTC 1213616
Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACT-ATGTTG--CTCTA-TACGAAAAGTATGAA 364080
| || || | || | |||| ||| || || | | | | | |||||| |||| ||
Sbjct 1213615 CCGGACTGGCAGACATCTGGG--GAC--CTGATTTCGACCGCAAGTACGAAGAGTACGAG 1213560
Query 364081 TCGGAGGGAAAGGCTCGTAAGAC-----AATTCCCGCACAGAAGCTATGGTTTGCCATCA 364135
|| |||| ||| ||| || ||| ||| ||| |||| | || ||
Sbjct 1213559 TC---TCGAAA-GCT-GTACAACTCGCAAATCGACGCCCAGGAGCTGTTCAAGGCGATTC 1213505
Query 364136 TGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCA 364195
|| |||||||| || ||| || | ||| |||| ||||| |||||| |
Sbjct 1213504 TGACAAGCCAGATTGAAACTGGAGGCCCGTTCATGCTGTATAAAGACAGCTGCAACGCGA 1213445
Query 364196 AGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTG 364255
| ||||||||| || | || || || || | | ||| || || || |||||| |
Sbjct 1213444 AATCCAACCAGAAGAATCTCGGCACCATCAAATCGTCCAATCTGTGCACTGAGATTGTCC 1213385
Query 364256 AATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGT 364315
| ||| | ||||||| ||| || || || ||||| || || | ||||| || | ||
Sbjct 1213384 AGTACTCGTCTCCCGAAGAGGTGGCTGTTTGCAACCTGGCTTCCGTGGCGCTGCCTGAGT 1213325
Query 364316 TTGTAAA 364322
|||| ||
Sbjct 1213324 TTGTGAA 1213318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352865234408
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