Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3 158 1e-33 seq24 138 1e-27 seq4 113 4e-20 seq14 91.5 1e-13 seq18 89.7 5e-13 >seq3 Length=1361780 Score = 158 bits (174), Expect = 1e-33 Identities = 351/515 (68%), Gaps = 39/515 (8%) Strand=Plus/Plus Query 46099 AAGAAAACCGACTGGGCGATGAAGTGGAT---CAAC-AGCAGCACCGCGACTTTCGCCGA 46154 ||||| |||||||||| | |||||||| | || || || | || || | ||| Sbjct 14709 AAGAAGGCCGACTGGGCTCTCAAGTGGATTTCCGACGAGGAGTCC----ACCTTTGGCGA 14764 Query 46155 GCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCAT 46214 ||| | | |||||||| || ||||| ||||||| || ||| ||| ||| |||| Sbjct 14765 GCGGCTCATTGCCTTTGCCGCCGTCGAGGGTATCTTTTTCTCAGGCTCTTTCGCCTCCAT 14824 Query 46215 CTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATAT 46273 ||| | |||| || | ||| | ||||||||||||| || || ||||||||| || | Sbjct 14825 CTTCTGGCTCAAGAAGCGAGGTC-TCATGCCCGGCCTCACCTTCTCCAACGAGCTCATTT 14883 Query 46274 CGCGCGACGAGGGCCTGCATACGGACTTTGCGTGT---CTCTACTATAACACTCGCGTGC 46330 | || |||||||| ||||| || |||||||| ||| |||| || | || |||| | | Sbjct 14884 CTCGAGACGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCTCAC-CTCGAGAAC 14942 Query 46331 ACGAC--------AAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGC 46382 |||| ||| ||| ||| ||| ||| || ||||| || | Sbjct 14943 -CGACCCTCCAAGAAGATTG---TCGAGGACGT------CATTGTC---GAGGCTGTTGG 14989 Query 46383 CATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACA 46442 ||| ||| ||||||| | || | ||| |||||| || ||||| ||||||||||| | Sbjct 14990 CATCGAGCAGGAGTTCCTGACCGACGCTCTGCCCTGTGGTCTGCTCGGCATGAACGCCAA 15049 Query 46443 GTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCT-TCACCAGC 46501 | |||||| | ||||| |||||||| || ||||||||||| || ||| || || | Sbjct 15050 GCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGACTGCTGGT--TGCTCTCGGCAAC 15107 Query 46502 -CGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGC 46560 | ||| | || | ||| || || || || ||| | |||||||| |||| || Sbjct 15108 ACCAAGGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGCCGGT 15167 Query 46561 AAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 || || || || ||||| ||||| ||| ||| || Sbjct 15168 AAGACCAACTTCTTCGAGAAGCGAGTCTCCGACTA 15202 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 ||||| || | ||| | || |||||||| || |||||||| || | || || | Sbjct 557859 CGCAGAACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCGGCCG 557800 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||||||||| ||| | || | |||||||||||||| |||||||| || ||| Sbjct 557799 TCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGGATTCCCTCCTTG 557740 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||||| | || | || || | |||||| | |||| ||| | Sbjct 557739 TCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCCACCTCGAGGGTGATA 557680 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCA 131233 || || || || || || || || || || |||| Sbjct 557679 GTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 557646 >seq24 Length=170883 Score = 138 bits (152), Expect = 1e-27 Identities = 726/1138 (64%), Gaps = 51/1138 (4%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| | ||| |||||||| || | ||| || || | || | ||| || ||| |||| Sbjct 96838 TTGACAATCTGGAACTCGCCAGCAAGCACTCGTCGAGAGTAAATGTTGGAGGTGTAGGGC 96779 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||| || || |||| ||| | |||||||||||| || ||| Sbjct 96778 TCGAAGCACTCGTTGAAGCCGAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGAGCAACC 96719 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAG--CGTACCCCAATCCC 145235 | | || || |||| ||| |||| |||| | |||| || ||| |||| |||| Sbjct 96718 AGCAGCGAGTTTCGCATACCGGTCTTCATGATATTGGCCTTAAGATCGT--CCCACTCCC 96661 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295 | ||| | || |||||| ||||| ||| |||| | ||| | ||| || Sbjct 96660 AAAGCTCGGAGGGAGTCACGTTCCACAGGTCAAACTGAAGGTCTCCCCTGGAGGCAGGAG 96601 Query 145296 TGCCTTGAAAGGAACTGTA---ACTG-CCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCC 145351 ||| || |||| ||| || | || |||| || | |||| || ||||| Sbjct 96600 AGCCCTGGAAGGTCTCGTAGGCACCGTCCTCAAG----AGCCATCTCGTAAGAGGCCTCG 96545 Query 145352 AGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTC 145411 | || ||| || || |||||| || || |||||||| | | || || | | Sbjct 96544 ACGGCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCAGAC 96485 Query 145412 TCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATG 145471 || | || | ||||| | || | ||||| || ||||| | |||| | || Sbjct 96484 TCAAAGGGAAGTCGCAGAGCCATGAAGGTGTCGGCCAGACCCTGAACACCCAGAGCAATA 96425 Query 145472 GGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG---ATAGGATATCGATTACGGTCG 145528 || |||||| ||||||| | || | || |||| | || || || |||||| Sbjct 96424 GGTCGATGTCGCATGTTGGACTTCTTTGC---CTCGGGAACGGGGTAGTAGTTTCGGTCG 96368 Query 145529 ATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTC- 145587 ||||| || | ||||||||| | || || | || | ||| ||| | ||||| Sbjct 96367 ATAATGGCGTTGAGGTTTCGCACAATGACTTTGGCGATATCGTGCAGCTTCTTGAAGTCG 96308 Query 145588 -AAACCGA----GCCTCGTCAACGA-CCACACAGCTATTGACGGCGATCGACGCCAAATT 145641 | | || | ||||| ||| ||| || | | ||| || || |||| || Sbjct 96307 TAGAAGGAGTTGGTGTCGTC-TCGAGTGACAAAGGTGGGCAGGGCAATGGAGGCCAGGTT 96249 Query 145642 ACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACA 145701 ||||| ||| ||| |||| ||| | || |||||| ||||| ||| | | Sbjct 96248 GCAAACAGCCACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAGCACAGGTTGGAAGA 96189 Query 145702 TTTGATGGTTCCCAGATTTTGCTGATT--ACTTTTCCTGTTGCACGCGTCCTTGTAGAGC 145759 ||||||||||| || || | ||| || ||||| | |||||| || |||||||||||| Sbjct 96188 CTTGATGGTTCCGAGGTTCTTCTGGTTGGACTTT--CGGTTGCAAGCATCCTTGTAGAGC 96131 Query 145760 ATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGT---GCAAGTCCTGC 145816 ||| | || || | ||| ||| | ||| || ||| || | ||| Sbjct 96130 ATGAAGGGGTTACCGGACTCGGTCTGGCAGT---CGAGAATGTGGTACCACAGCTTCTGG 96074 Query 145817 GCACGCACCTGCTGCTGGTAG----CGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTC 145872 || | | || | | || | |||||||| | ||||| | | ||| |||| || Sbjct 96073 GCGGGGA--TG--GTTCGTCGACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTT 96018 Query 145873 AAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCA 145932 ||| || |||||| ||| ||| |||||||||| |||||| ||||| || | ||| Sbjct 96017 GAACTCGTCGCCGTAGACGTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTCCA 95958 Query 145933 TACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAA 145992 || |||| | ||| |||||||| |||| ||| || | |||||| || | || Sbjct 95957 CTCGGCGTTCTGCTCGACTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACAG 95898 Query 145993 GTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCA-CACT-ATAG 146050 ||| || ||| ||||| || || ||| ||| | ||| ||| || Sbjct 95897 GTCTCGGGCTCGAATCTCCTC-CTTTCCGTGGTTC-TTTCGCAGCTCGCAGAACTCGAAG 95840 Query 146051 ATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCC 146107 ||||| ||||||| || |||| || | ||| | |||||| ||| ||||| ||| Sbjct 95839 ATGTCGTCGTGCCAGGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCC 95780 Query 146108 TGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGG 146165 |||||||||| || | ||||||| |||| |||| ||||||| ||| ||| ||| Sbjct 95779 TGGTCCACGTATCGGGCAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGG 95722 >seq4 Length=1325655 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || | ||| | || |||||||| || |||||||| || Sbjct 386812 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 386753 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| |||||||| || ||| |||| | |||||||||||||| || Sbjct 386752 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 386693 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 386692 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 386633 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || |||||||| || || || || || |||||||| Sbjct 386632 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAGATCTGCAT 386586 >seq14 Length=605277 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || || | ||| | || |||||||| || |||||||| || | ||| || | Sbjct 299721 CGGAGAACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCGGCCG 299780 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| |||||||| || || | || | |||||||||||||| || ||||| || ||| Sbjct 299781 TCCTCAAGCTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 299840 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || || || ||||| | || | || |||| |||||| | |||| || | | Sbjct 299841 TCCTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAGGACTCAACCTCGAGAGTGATG 299900 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || || || || || || || |||||||| Sbjct 299901 GTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 299935 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | ||| | ||| |||||||| || ||||||||||| Sbjct 299937 CCACCTCGAAGTCGGAGAACCAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAG 299996 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||| || ||| | || | |||||||||||||| || Sbjct 299997 AGAGTTCGACCATCCTCAAGCTGCTTTCCAGCGAAAATCAGTCGCTGCTGGTCCGGGGGA 300056 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 || || || ||||| ||| || ||||| | || | |||||||| ||| |||| Sbjct 300057 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATCGGAGGATTCGA 300114 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || ||||| | || | || || ||||| || |||||||| ||| Sbjct 298762 GCCACCTCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 298821 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| |||||||| || ||| |||| | |||||||||||||| || Sbjct 298822 AAGGGTTCGACCGTCCTCCAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 298881 Query 131127 GATTCCTTCTTTGTC 131141 ||| || || ||||| Sbjct 298882 GATACCCTCCTTGTC 298896 >seq18 Length=471259 Score = 89.7 bits (98), Expect = 5e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 51810 GTTGCCGAGATCGCCCACGTGTCGCTCGGCGGAGTTGGGTGCGCCGTGGTGTTTGCCAAG 51869 ||| ||||| || || ||||||||||||| | | ||||| | ||||||| || | Sbjct 53760 GTTTCCGAGGTCACCAACGTGTCGCTCGGAGTCGGTGGGTCCACCGTGGTTCTTCTTGAA 53701 Query 51870 GGGATTAAAGTGCTCGCCGGCGGACGTGCACCCGTTGCTGGTGTCGCCGAACTCGTGCAC 51929 ||| || ||||| |||||| || ||||| |||||| || |||| || |||||||| || Sbjct 53700 GGGGTTGAAGTGGGGGCCGGCAGAGGTGCAGCCGTTGGTGTTGTCTCCAAACTCGTGGAC 53641 Query 51930 GTGAAAGCC 51938 ||| || || Sbjct 53640 GTGGAATCC 53632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012540392960