Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq3 158 1e-33
seq24 138 1e-27
seq4 113 4e-20
seq14 91.5 1e-13
seq18 89.7 5e-13
>seq3
Length=1361780
Score = 158 bits (174), Expect = 1e-33
Identities = 351/515 (68%), Gaps = 39/515 (8%)
Strand=Plus/Plus
Query 46099 AAGAAAACCGACTGGGCGATGAAGTGGAT---CAAC-AGCAGCACCGCGACTTTCGCCGA 46154
||||| |||||||||| | |||||||| | || || || | || || | |||
Sbjct 14709 AAGAAGGCCGACTGGGCTCTCAAGTGGATTTCCGACGAGGAGTCC----ACCTTTGGCGA 14764
Query 46155 GCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCAT 46214
||| | | |||||||| || ||||| ||||||| || ||| ||| ||| ||||
Sbjct 14765 GCGGCTCATTGCCTTTGCCGCCGTCGAGGGTATCTTTTTCTCAGGCTCTTTCGCCTCCAT 14824
Query 46215 CTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATAT 46273
||| | |||| || | ||| | ||||||||||||| || || ||||||||| || |
Sbjct 14825 CTTCTGGCTCAAGAAGCGAGGTC-TCATGCCCGGCCTCACCTTCTCCAACGAGCTCATTT 14883
Query 46274 CGCGCGACGAGGGCCTGCATACGGACTTTGCGTGT---CTCTACTATAACACTCGCGTGC 46330
| || |||||||| ||||| || |||||||| ||| |||| || | || |||| | |
Sbjct 14884 CTCGAGACGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCTCAC-CTCGAGAAC 14942
Query 46331 ACGAC--------AAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGC 46382
|||| ||| ||| ||| ||| ||| || ||||| || |
Sbjct 14943 -CGACCCTCCAAGAAGATTG---TCGAGGACGT------CATTGTC---GAGGCTGTTGG 14989
Query 46383 CATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACA 46442
||| ||| ||||||| | || | ||| |||||| || ||||| ||||||||||| |
Sbjct 14990 CATCGAGCAGGAGTTCCTGACCGACGCTCTGCCCTGTGGTCTGCTCGGCATGAACGCCAA 15049
Query 46443 GTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCT-TCACCAGC 46501
| |||||| | ||||| |||||||| || ||||||||||| || ||| || || |
Sbjct 15050 GCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGACTGCTGGT--TGCTCTCGGCAAC 15107
Query 46502 -CGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGC 46560
| ||| | || | ||| || || || || ||| | |||||||| |||| ||
Sbjct 15108 ACCAAGGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGCCGGT 15167
Query 46561 AAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
|| || || || ||||| ||||| ||| ||| ||
Sbjct 15168 AAGACCAACTTCTTCGAGAAGCGAGTCTCCGACTA 15202
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079
||||| || | ||| | || |||||||| || |||||||| || | || || |
Sbjct 557859 CGCAGAACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCGGCCG 557800
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
||||| ||||||||||| ||| | || | |||||||||||||| |||||||| || |||
Sbjct 557799 TCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGGATTCCCTCCTTG 557740
Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199
|| ||| || ||||| | || | || || | |||||| | |||| ||| |
Sbjct 557739 TCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCCACCTCGAGGGTGATA 557680
Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCA 131233
|| || || || || || || || || || ||||
Sbjct 557679 GTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 557646
>seq24
Length=170883
Score = 138 bits (152), Expect = 1e-27
Identities = 726/1138 (64%), Gaps = 51/1138 (4%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||| | ||| |||||||| || | ||| || || | || | ||| || ||| ||||
Sbjct 96838 TTGACAATCTGGAACTCGCCAGCAAGCACTCGTCGAGAGTAAATGTTGGAGGTGTAGGGC 96779
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| ||| || || |||| ||| | |||||||||||| || |||
Sbjct 96778 TCGAAGCACTCGTTGAAGCCGAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGAGCAACC 96719
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAG--CGTACCCCAATCCC 145235
| | || || |||| ||| |||| |||| | |||| || ||| |||| ||||
Sbjct 96718 AGCAGCGAGTTTCGCATACCGGTCTTCATGATATTGGCCTTAAGATCGT--CCCACTCCC 96661
Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295
| ||| | || |||||| ||||| ||| |||| | ||| | ||| ||
Sbjct 96660 AAAGCTCGGAGGGAGTCACGTTCCACAGGTCAAACTGAAGGTCTCCCCTGGAGGCAGGAG 96601
Query 145296 TGCCTTGAAAGGAACTGTA---ACTG-CCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCC 145351
||| || |||| ||| || | || |||| || | |||| || |||||
Sbjct 96600 AGCCCTGGAAGGTCTCGTAGGCACCGTCCTCAAG----AGCCATCTCGTAAGAGGCCTCG 96545
Query 145352 AGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTC 145411
| || ||| || || |||||| || || |||||||| | | || || | |
Sbjct 96544 ACGGCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCAGAC 96485
Query 145412 TCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATG 145471
|| | || | ||||| | || | ||||| || ||||| | |||| | ||
Sbjct 96484 TCAAAGGGAAGTCGCAGAGCCATGAAGGTGTCGGCCAGACCCTGAACACCCAGAGCAATA 96425
Query 145472 GGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG---ATAGGATATCGATTACGGTCG 145528
|| |||||| ||||||| | || | || |||| | || || || ||||||
Sbjct 96424 GGTCGATGTCGCATGTTGGACTTCTTTGC---CTCGGGAACGGGGTAGTAGTTTCGGTCG 96368
Query 145529 ATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTC- 145587
||||| || | ||||||||| | || || | || | ||| ||| | |||||
Sbjct 96367 ATAATGGCGTTGAGGTTTCGCACAATGACTTTGGCGATATCGTGCAGCTTCTTGAAGTCG 96308
Query 145588 -AAACCGA----GCCTCGTCAACGA-CCACACAGCTATTGACGGCGATCGACGCCAAATT 145641
| | || | ||||| ||| ||| || | | ||| || || |||| ||
Sbjct 96307 TAGAAGGAGTTGGTGTCGTC-TCGAGTGACAAAGGTGGGCAGGGCAATGGAGGCCAGGTT 96249
Query 145642 ACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACA 145701
||||| ||| ||| |||| ||| | || |||||| ||||| ||| | |
Sbjct 96248 GCAAACAGCCACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAGCACAGGTTGGAAGA 96189
Query 145702 TTTGATGGTTCCCAGATTTTGCTGATT--ACTTTTCCTGTTGCACGCGTCCTTGTAGAGC 145759
||||||||||| || || | ||| || ||||| | |||||| || ||||||||||||
Sbjct 96188 CTTGATGGTTCCGAGGTTCTTCTGGTTGGACTTT--CGGTTGCAAGCATCCTTGTAGAGC 96131
Query 145760 ATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGT---GCAAGTCCTGC 145816
||| | || || | ||| ||| | ||| || ||| || | |||
Sbjct 96130 ATGAAGGGGTTACCGGACTCGGTCTGGCAGT---CGAGAATGTGGTACCACAGCTTCTGG 96074
Query 145817 GCACGCACCTGCTGCTGGTAG----CGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTC 145872
|| | | || | | || | |||||||| | ||||| | | ||| |||| ||
Sbjct 96073 GCGGGGA--TG--GTTCGTCGACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTT 96018
Query 145873 AAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCA 145932
||| || |||||| ||| ||| |||||||||| |||||| ||||| || | |||
Sbjct 96017 GAACTCGTCGCCGTAGACGTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTCCA 95958
Query 145933 TACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAA 145992
|| |||| | ||| |||||||| |||| ||| || | |||||| || | ||
Sbjct 95957 CTCGGCGTTCTGCTCGACTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACAG 95898
Query 145993 GTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCA-CACT-ATAG 146050
||| || ||| ||||| || || ||| ||| | ||| ||| ||
Sbjct 95897 GTCTCGGGCTCGAATCTCCTC-CTTTCCGTGGTTC-TTTCGCAGCTCGCAGAACTCGAAG 95840
Query 146051 ATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCC 146107
||||| ||||||| || |||| || | ||| | |||||| ||| ||||| |||
Sbjct 95839 ATGTCGTCGTGCCAGGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCC 95780
Query 146108 TGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGG 146165
|||||||||| || | ||||||| |||| |||| ||||||| ||| ||| |||
Sbjct 95779 TGGTCCACGTATCGGGCAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGG 95722
>seq4
Length=1325655
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||| || | ||| | || |||||||| || |||||||| ||
Sbjct 386812 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 386753
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| |||||||| || ||| |||| | |||||||||||||| ||
Sbjct 386752 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 386693
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 386692 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 386633
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || |||||||| || || || || || ||||||||
Sbjct 386632 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAGATCTGCAT 386586
>seq14
Length=605277
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079
|| || || | ||| | || |||||||| || |||||||| || | ||| || |
Sbjct 299721 CGGAGAACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCGGCCG 299780
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
||||| |||||||| || || | || | |||||||||||||| || ||||| || |||
Sbjct 299781 TCCTCAAGCTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 299840
Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199
|| || || ||||| | || | || |||| |||||| | |||| || | |
Sbjct 299841 TCCTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAGGACTCAACCTCGAGAGTGATG 299900
Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| || || || || || || || || ||||||||
Sbjct 299901 GTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 299935
Score = 87.8 bits (96), Expect = 2e-12
Identities = 126/178 (71%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | ||| | ||| |||||||| || |||||||||||
Sbjct 299937 CCACCTCGAAGTCGGAGAACCAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAG 299996
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| |||||||| || ||| | || | |||||||||||||| ||
Sbjct 299997 AGAGTTCGACCATCCTCAAGCTGCTTTCCAGCGAAAATCAGTCGCTGCTGGTCCGGGGGA 300056
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
|| || || ||||| ||| || ||||| | || | |||||||| ||| ||||
Sbjct 300057 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATCGGAGGATTCGA 300114
Score = 86.0 bits (94), Expect = 6e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | || ||||| | || | || || ||||| || |||||||| |||
Sbjct 298762 GCCACCTCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 298821
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| || |||||| |||||||| || ||| |||| | |||||||||||||| ||
Sbjct 298822 AAGGGTTCGACCGTCCTCCAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 298881
Query 131127 GATTCCTTCTTTGTC 131141
||| || || |||||
Sbjct 298882 GATACCCTCCTTGTC 298896
>seq18
Length=471259
Score = 89.7 bits (98), Expect = 5e-13
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 51810 GTTGCCGAGATCGCCCACGTGTCGCTCGGCGGAGTTGGGTGCGCCGTGGTGTTTGCCAAG 51869
||| ||||| || || ||||||||||||| | | ||||| | ||||||| || |
Sbjct 53760 GTTTCCGAGGTCACCAACGTGTCGCTCGGAGTCGGTGGGTCCACCGTGGTTCTTCTTGAA 53701
Query 51870 GGGATTAAAGTGCTCGCCGGCGGACGTGCACCCGTTGCTGGTGTCGCCGAACTCGTGCAC 51929
||| || ||||| |||||| || ||||| |||||| || |||| || |||||||| ||
Sbjct 53700 GGGGTTGAAGTGGGGGCCGGCAGAGGTGCAGCCGTTGGTGTTGTCTCCAAACTCGTGGAC 53641
Query 51930 GTGAAAGCC 51938
||| || ||
Sbjct 53640 GTGGAATCC 53632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012540392960
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