Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq3 192 7e-44
>seq3
Length=1361780
Score = 192 bits (212), Expect = 7e-44
Identities = 507/765 (66%), Gaps = 23/765 (3%)
Strand=Plus/Minus
Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986
|| || ||||| || |||||||| |||| | | ||||| || || |||| |||
Sbjct 15082 TCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGACC-ACA 15024
Query 92987 GGT-AGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045
|| ||||||||||||| ||| || | |||||| |||| || || | || ||
Sbjct 15023 GGGCAGAGCGTCGGTCAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGTC--- 14967
Query 93046 TACTCTACTAT----TTGGTGGTTT--TTGTACGACATAATTGTACATTAAGCACGCAAA 93099
||| || || |||| || | || | ||| | | | | | | || |||||
Sbjct 14966 --CTCGACAATCTTCTTGGAGGGTCGGTTCT-CGAGGTGAGAGAAGAGCAGACAGGCAAA 14910
Query 93100 GTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAA 93159
|||||| || | ||| |||||||| || || | ||| ||| ||| || | || || |
Sbjct 14909 GTCGGTGTGCAGACCCTCGTCTCGAGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCAT 14850
Query 93160 CAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTC 93219
|| ||||| ||||||||||| || || || || ||| || || ||||| ||||| ||
Sbjct 14849 GAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCTGAGAAAAAGATACCCTC 14790
Query 93220 CACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT--TACT-GCTGATCCA 93276
||||| ||||| || | | || ||| |||| | ||| | | | | |||||
Sbjct 14789 GACGGCGGCAAAGGCAATGAGCCGCTCGCCAAA---GGTGGACTCCTCGTCGGAAATCCA 14733
Query 93277 TTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAG 93336
|| | |||||| ||||| || ||||| || || || | || ||||| ||||| || ||
Sbjct 14732 CTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAG 14673
Query 93337 GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGA 93396
||| | |||||| | | || |||||||| ||||| | ||| || || |||| ||
Sbjct 14672 GTAGTTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATGAGCAGCGAGTAGGTTTCCGA 14613
Query 93397 ATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCAC 93456
|||| |||||||| || ||||| |||||||| || | || || | ||| ||
Sbjct 14612 GTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGAGCCTGGAC 14553
Query 93457 TTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaa 93516
|| || |||| ||| || || || || ||||| || || ||||| || ||||| ||
Sbjct 14552 CTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTGACGATTCCGTCGGAGGCAGCAAAGAA 14493
Query 93517 aGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCAATCGGA 93573
|||| | || || || | ||| || | || | | || ||||| |||
Sbjct 14492 GGCCAGAACGTGAGAGATGAAGAATCGCTCGTCGTTGTTGAGTCGGTTCTCCCAGTCGCC 14433
Query 93574 TAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTA 93633
| || || ||||||| || || ||||||| || || || || || || |||||
Sbjct 14432 CATGTCCTTGCCGAGATCGATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCTTCTTGTA 14373
Query 93634 CATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678
||| | ||| || || || || || || || || | ||||| ||
Sbjct 14372 CATCTGCCAGATCTCATGGTACTGGATGGGGAAGAGCACAAACCG 14328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860493726560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |