Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 192 7e-44 >seq3 Length=1361780 Score = 192 bits (212), Expect = 7e-44 Identities = 507/765 (66%), Gaps = 23/765 (3%) Strand=Plus/Minus Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986 || || ||||| || |||||||| |||| | | ||||| || || |||| ||| Sbjct 15082 TCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGACC-ACA 15024 Query 92987 GGT-AGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045 || ||||||||||||| ||| || | |||||| |||| || || | || || Sbjct 15023 GGGCAGAGCGTCGGTCAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGTC--- 14967 Query 93046 TACTCTACTAT----TTGGTGGTTT--TTGTACGACATAATTGTACATTAAGCACGCAAA 93099 ||| || || |||| || | || | ||| | | | | | | || ||||| Sbjct 14966 --CTCGACAATCTTCTTGGAGGGTCGGTTCT-CGAGGTGAGAGAAGAGCAGACAGGCAAA 14910 Query 93100 GTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAA 93159 |||||| || | ||| |||||||| || || | ||| ||| ||| || | || || | Sbjct 14909 GTCGGTGTGCAGACCCTCGTCTCGAGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCAT 14850 Query 93160 CAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTC 93219 || ||||| ||||||||||| || || || || ||| || || ||||| ||||| || Sbjct 14849 GAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCTGAGAAAAAGATACCCTC 14790 Query 93220 CACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT--TACT-GCTGATCCA 93276 ||||| ||||| || | | || ||| |||| | ||| | | | | ||||| Sbjct 14789 GACGGCGGCAAAGGCAATGAGCCGCTCGCCAAA---GGTGGACTCCTCGTCGGAAATCCA 14733 Query 93277 TTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAG 93336 || | |||||| ||||| || ||||| || || || | || ||||| ||||| || || Sbjct 14732 CTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAG 14673 Query 93337 GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGA 93396 ||| | |||||| | | || |||||||| ||||| | ||| || || |||| || Sbjct 14672 GTAGTTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATGAGCAGCGAGTAGGTTTCCGA 14613 Query 93397 ATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCAC 93456 |||| |||||||| || ||||| |||||||| || | || || | ||| || Sbjct 14612 GTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGAGCCTGGAC 14553 Query 93457 TTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaa 93516 || || |||| ||| || || || || ||||| || || ||||| || ||||| || Sbjct 14552 CTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTGACGATTCCGTCGGAGGCAGCAAAGAA 14493 Query 93517 aGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCAATCGGA 93573 |||| | || || || | ||| || | || | | || ||||| ||| Sbjct 14492 GGCCAGAACGTGAGAGATGAAGAATCGCTCGTCGTTGTTGAGTCGGTTCTCCCAGTCGCC 14433 Query 93574 TAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTA 93633 | || || ||||||| || || ||||||| || || || || || || ||||| Sbjct 14432 CATGTCCTTGCCGAGATCGATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCTTCTTGTA 14373 Query 93634 CATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678 ||| | ||| || || || || || || || || | ||||| || Sbjct 14372 CATCTGCCAGATCTCATGGTACTGGATGGGGAAGAGCACAAACCG 14328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860493726560