Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq24 226 3e-54 seq3 122 1e-22 seq1 89.7 6e-13 >seq24 Length=170883 Score = 226 bits (250), Expect = 3e-54 Identities = 1142/1793 (64%), Gaps = 55/1793 (3%) Strand=Plus/Minus Query 113558 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 113617 |||| | ||||||| ||||| || ||| | | ||| ||||||||||| || ||| Sbjct 97183 TCAATGGTGAACTGGATGGGGGCGGCAGCAGCCATGGTTCGCAGGTAGTACATACCAGTC 97124 Query 113618 TTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTT 113677 ||||| |||| ||||||| | || | ||||| |||| | |||| | || || Sbjct 97123 TTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAGGTGAGCTTGCCCATGGTGGGG--- 97067 Query 113678 TCCATGAAGAG---GTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCC 113734 ||| ||| | | ||| | ||||| || || |||||| | || || || ||| Sbjct 97066 TCCTTGATGTGAATGTTGAGGGACTGGGACTGGTCAATGAAGGGCGATCGGTCGGCAGCC 97007 Query 113735 ATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCA 113794 || || || | |||| | || |||||||| |||| ||| |||| ||| || || Sbjct 97006 ATCTCGATGATTCGCTTCTGCGAAATCTCCCACACGGTTCGGTACAGGTCCTTGATCTCC 96947 Query 113795 TCTGGGATATCCACGATATTTTGGATGGAGCCAC---CCGCCTTGACCATGAGATCCTTC 113851 | ||||| | ||| || || | ||| || | ||| || || | | |||| Sbjct 96946 TGGGGGATGTTGGGGATGTTCTGCACGGATCCGTTGTCGGCC---ACGATTCGGTTCTTC 96890 Query 113852 ATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACA 113911 || || ||| ||||||| || || |||| | || ||||||| Sbjct 96889 ATGGTCTCATTCCACAGACCAACCTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACAATC 96830 Query 113912 ACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCA 113970 ||||| || || || |||| ||| || || |||| ||||| ||||| ||||| Sbjct 96829 TGGAACTCGCCAGCAAGCACTCGTCG-AGAGTAAATGTTGGAGGTGTAGGGCTCGAAGCA 96771 Query 113971 CTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 114030 ||| ||| || | || || | ||||||||| ||||||||||| || | || || Sbjct 96770 CTCGTTGAAGCCGAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGAGCAACCAGCAGCGA 96711 Query 114031 GTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTT 114090 ||| || | ||| | | | | || |||| || ||||||| || | |||| Sbjct 96710 GTTTCGCATACCGGTCTTCATGATATTGGCCTTAAGATCGTCCCACTCCCAA---AGCTC 96654 Query 114091 TGTCTC---CCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTC 114147 | | | | ||||| |||||||| ||| || |||||| || || |||| Sbjct 96653 GGAGGGAGTCACGTTCCACAGGTCAAACTGAAGGTCTCCCCTGGAGGCAGGAGAGCCCTG 96594 Query 114148 AAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTG 114207 || |||||||| | || || | |||| ||| | ||||||| |||| |||| Sbjct 96593 GAAGGTCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGAGGCCTCGACGGCTCCGTG 96534 Query 114208 ATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAG 114267 || || ||||| || || | || | |||||||||| | || ||||| | || Sbjct 96533 GTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCAGACTCAAAGGGAAG 96474 Query 114268 TCGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTC 114326 ||| || | || || || || ||||| || ||||| || |||| || ||||||| Sbjct 96473 TCG-CAGAGCCATGAAGGTGTCGGCCAGACCCTGAACACCCAGAGCAATAGGTCGATGTC 96415 Query 114327 TCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTAT 114383 ||| || ||||| || ||| ||||| || | || | ||||||| | Sbjct 96414 GCATGTTGGACTTCTTTGC---CTCGGGAACGGGGTAGTAGTTTCGGTCGATAATGGCGT 96358 Query 114384 TTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA-----ACT 114438 | || ||| | || || | ||| || || ||||| | | | || | | | Sbjct 96357 TGAGGTTTCGCACAATGACTTTGGCGATATCGTGCAGCTTCTTGAAGTCGTAGAAGGAGT 96298 Query 114439 GCGAGTC-TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGG 114497 | ||| ||| | ||||| | | || ||||| || || ||||| || || |||| Sbjct 96297 TGGTGTCGTCTCGAGTGACAAAGGTGGGCAGGGCAATGGAGGCCAGGTTGCAAACAGCCA 96238 Query 114498 TCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGC 114557 |||||| | || |||||| | ||| || |||| || ||| ||| ||||| | Sbjct 96237 CCTCATCGGGAGAAGAGTACTCGACAATCTCGCAGCACAGGTTGGAAGACTTGATGGTTC 96178 Query 114558 CCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCC 114617 | | |||||| || || |||||| ||| || ||||||||||| |||||| | || | | Sbjct 96177 CGAGGTTCTTCTGGTTGGACTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTAC 96118 Query 114618 CCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCG 114676 | | ||| || ||| | | |||||| | ||| | | || | ||| || | || || Sbjct 96117 CGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCTTCTG-GGCGGGGATGGT-TCG 96060 Query 114677 TTG-GCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG-GGCTTCAAACTCTTCACCCACGG 114734 | | |||| ||||||| |||||||| ||| || |||| ||||| || || | Sbjct 96059 TCGACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTT-GAACTCGTCGCCGTAGA 96001 Query 114735 CCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAA 114794 | || || || || || | ||||| | ||||| ||| | | || ||| | Sbjct 96000 CGTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTCCACTCGGCGTTCTGCTCGA 95941 Query 114795 CACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTT 114854 | |||| |||||| || || |||||||| || || ||| || || || ||| | Sbjct 95940 CTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACAGGTCTCGGGCTCGAATCT 95881 Query 114855 CTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTT 114914 | || | || || || |||| ||| | || || | ||| || ||||||| || | Sbjct 95880 CCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCGTGCCAGGGCT 95821 Query 114915 CCAGGTACACCGCGATTGACCC------CTTACGACGACCAGCCTGGTTTACATACCTCG 114968 | ||||||| || | | || ||| | | || |||||| || || | | Sbjct 95820 CAAGGTACATGGCAAAGGCTCCGGGTCGCTT--GTTG-CCTCCCTGGTCCACGTATCGGG 95764 Query 114969 CTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCC 115028 | ||| || | || || ||||| || | |||||| | || || || || || Sbjct 95763 CAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTGCCGG 95704 Query 115029 GAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCA 115086 || || ||| | |||||| || | |||||| | ||| ||||| || || | Sbjct 95703 CAATGTAGGAGCC--GGTGGCTCGGATGTTGTGGATGGAGAGACCGATACCGCCAGCAGA 95646 Query 115087 CTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTT 115146 ||| || || | || || | |||| | ||||||| |||||||| ||||| |||| Sbjct 95645 CTTGGAAATCAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTT 95586 Query 115147 ATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGT 115206 | || |||||| || |||||| || ||| || || ||||||||| ||||||| Sbjct 95585 CATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAGAGGGT 95526 Query 115207 TGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACGGCGG 115265 || | |||||| | || ||| | || ||||| | | ||||||||| | | | || Sbjct 95525 GGGGGAAGCGTGGGT-AAAGTACTTCTGAGACATGTAGTTGTAGGTCTCGATGGCTCGGG 95467 Query 115266 GAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 115318 |||||| || ||||| || |||| || || ||||| | ||| | |||||| Sbjct 95466 CAATGTCGTCACCGTGGATTCCGACGGACACTCGCATGATCATCTGCTGGGGT 95414 >seq3 Length=1361780 Score = 122 bits (134), Expect = 1e-22 Identities = 171/237 (72%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| ||||||||||| || || ||||| || || |||||| || || Sbjct 14915 GGCAAAGTCGGTGTGCAGACCCTCGTCTCGAGAAATGAGCTCGTTGGAGAAGGTGAGGCC 14856 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| |||||||| | |||||| || | || || || ||||| ||||| Sbjct 14855 GGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCTGAGAAAAAGAT 14796 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTC 126222 ||||| || || || |||| ||| ||||| |||||| | |||| | || | Sbjct 14795 ACCCTCGACGGCGGCAAAGGCAATGAGCCGCTCGCCAAAGGTG---GACTCCTCGTCGGA 14739 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 || |||||| | ||||| | ||||| |||| ||| || |||| ||||| ||| || Sbjct 14738 AATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 14682 >seq1 Length=2434256 Score = 89.7 bits (98), Expect = 6e-13 Identities = 280/428 (65%), Gaps = 8/428 (2%) Strand=Plus/Plus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || || |||||||| || || |||||||| |||||| | | | |||||||| | Sbjct 1212439 CGTAGATAGTACATGCCTGTTTTGAGCCCGGCCTTCCATCCGTGGAAATGCATCGCTGTG 1212498 Query 113657 AACTTGGAGAGTGTTGGACTTTC---CATGAAGAGGTTCATACTTTGGGATTGATCGATG 113713 | ||| | | || || | || |||||| | ||| | | || || || || ||| Sbjct 1212499 ATTTTGCCGTGGGT--GA-TATCGGGCATGAAAATGTTGAGAGACTGCGACTGGTCAATG 1212555 Query 113714 AAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTT 113773 || | | ||| ||||||||||||| || | | |||||| ||||| | || Sbjct 1212556 TAGGGAGCTCGAGCCGCCGCCATATCGATAATGTTGCGAGCCTTGATCTCCCAAGCGGTC 1212615 Query 113774 CTGTAGA-GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGC 113832 || |||| || || | || | || ||||| | |||| | || || |||||| | Sbjct 1212616 CTATAGACGGCTC-TGATGTGTTCGGGGATCTGGGTGATACTCTGTATCGAGCCATTGTC 1212674 Query 113833 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 113892 | || || | | ||||| |||| | ||| | || | ||| ||||||| | || Sbjct 1212675 GTGGATGATTCGGTTTTTCATCTCCTCGGTCCACATGCCCAGCTTGATGAGATCTTTCAT 1212734 Query 113893 GAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGT 113952 || | |||| || | |||||| || || || || | ||| || || |||| Sbjct 1212735 CAGCCAATGGTTGATCACCAGAAACTCGCCTGCCTGGACTCGACGCAGGTAAATGTTGGA 1212794 Query 113953 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCAT 114012 |||||| |||||||| ||||| |||| |||| || || | ||||| ||||| ||||| Sbjct 1212795 CGTGTACGGCTCAAAACACTCGTTGTGGCCCAGAATCTGAGAAGTGGACGCTGTAGGCAT 1212854 Query 114013 GGGTGCCA 114020 || |||| Sbjct 1212855 AGGAGCCA 1212862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353271455520