Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq24 226 3e-54
seq3 122 1e-22
seq1 89.7 6e-13
>seq24
Length=170883
Score = 226 bits (250), Expect = 3e-54
Identities = 1142/1793 (64%), Gaps = 55/1793 (3%)
Strand=Plus/Minus
Query 113558 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 113617
|||| | ||||||| ||||| || ||| | | ||| ||||||||||| || |||
Sbjct 97183 TCAATGGTGAACTGGATGGGGGCGGCAGCAGCCATGGTTCGCAGGTAGTACATACCAGTC 97124
Query 113618 TTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTT 113677
||||| |||| ||||||| | || | ||||| |||| | |||| | || ||
Sbjct 97123 TTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAGGTGAGCTTGCCCATGGTGGGG--- 97067
Query 113678 TCCATGAAGAG---GTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCC 113734
||| ||| | | ||| | ||||| || || |||||| | || || || |||
Sbjct 97066 TCCTTGATGTGAATGTTGAGGGACTGGGACTGGTCAATGAAGGGCGATCGGTCGGCAGCC 97007
Query 113735 ATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCA 113794
|| || || | |||| | || |||||||| |||| ||| |||| ||| || ||
Sbjct 97006 ATCTCGATGATTCGCTTCTGCGAAATCTCCCACACGGTTCGGTACAGGTCCTTGATCTCC 96947
Query 113795 TCTGGGATATCCACGATATTTTGGATGGAGCCAC---CCGCCTTGACCATGAGATCCTTC 113851
| ||||| | ||| || || | ||| || | ||| || || | | ||||
Sbjct 96946 TGGGGGATGTTGGGGATGTTCTGCACGGATCCGTTGTCGGCC---ACGATTCGGTTCTTC 96890
Query 113852 ATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACA 113911
|| || ||| ||||||| || || |||| | || |||||||
Sbjct 96889 ATGGTCTCATTCCACAGACCAACCTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACAATC 96830
Query 113912 ACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCA 113970
||||| || || || |||| ||| || || |||| ||||| ||||| |||||
Sbjct 96829 TGGAACTCGCCAGCAAGCACTCGTCG-AGAGTAAATGTTGGAGGTGTAGGGCTCGAAGCA 96771
Query 113971 CTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 114030
||| ||| || | || || | ||||||||| ||||||||||| || | || ||
Sbjct 96770 CTCGTTGAAGCCGAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGAGCAACCAGCAGCGA 96711
Query 114031 GTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTT 114090
||| || | ||| | | | | || |||| || ||||||| || | ||||
Sbjct 96710 GTTTCGCATACCGGTCTTCATGATATTGGCCTTAAGATCGTCCCACTCCCAA---AGCTC 96654
Query 114091 TGTCTC---CCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTC 114147
| | | | ||||| |||||||| ||| || |||||| || || ||||
Sbjct 96653 GGAGGGAGTCACGTTCCACAGGTCAAACTGAAGGTCTCCCCTGGAGGCAGGAGAGCCCTG 96594
Query 114148 AAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTG 114207
|| |||||||| | || || | |||| ||| | ||||||| |||| ||||
Sbjct 96593 GAAGGTCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGAGGCCTCGACGGCTCCGTG 96534
Query 114208 ATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAG 114267
|| || ||||| || || | || | |||||||||| | || ||||| | ||
Sbjct 96533 GTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCAGACTCAAAGGGAAG 96474
Query 114268 TCGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTC 114326
||| || | || || || || ||||| || ||||| || |||| || |||||||
Sbjct 96473 TCG-CAGAGCCATGAAGGTGTCGGCCAGACCCTGAACACCCAGAGCAATAGGTCGATGTC 96415
Query 114327 TCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTAT 114383
||| || ||||| || ||| ||||| || | || | ||||||| |
Sbjct 96414 GCATGTTGGACTTCTTTGC---CTCGGGAACGGGGTAGTAGTTTCGGTCGATAATGGCGT 96358
Query 114384 TTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA-----ACT 114438
| || ||| | || || | ||| || || ||||| | | | || | | |
Sbjct 96357 TGAGGTTTCGCACAATGACTTTGGCGATATCGTGCAGCTTCTTGAAGTCGTAGAAGGAGT 96298
Query 114439 GCGAGTC-TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGG 114497
| ||| ||| | ||||| | | || ||||| || || ||||| || || ||||
Sbjct 96297 TGGTGTCGTCTCGAGTGACAAAGGTGGGCAGGGCAATGGAGGCCAGGTTGCAAACAGCCA 96238
Query 114498 TCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGC 114557
|||||| | || |||||| | ||| || |||| || ||| ||| ||||| |
Sbjct 96237 CCTCATCGGGAGAAGAGTACTCGACAATCTCGCAGCACAGGTTGGAAGACTTGATGGTTC 96178
Query 114558 CCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCC 114617
| | |||||| || || |||||| ||| || ||||||||||| |||||| | || | |
Sbjct 96177 CGAGGTTCTTCTGGTTGGACTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTAC 96118
Query 114618 CCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCG 114676
| | ||| || ||| | | |||||| | ||| | | || | ||| || | || ||
Sbjct 96117 CGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCTTCTG-GGCGGGGATGGT-TCG 96060
Query 114677 TTG-GCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG-GGCTTCAAACTCTTCACCCACGG 114734
| | |||| ||||||| |||||||| ||| || |||| ||||| || || |
Sbjct 96059 TCGACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTT-GAACTCGTCGCCGTAGA 96001
Query 114735 CCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAA 114794
| || || || || || | ||||| | ||||| ||| | | || ||| |
Sbjct 96000 CGTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTCCACTCGGCGTTCTGCTCGA 95941
Query 114795 CACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTT 114854
| |||| |||||| || || |||||||| || || ||| || || || ||| |
Sbjct 95940 CTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACAGGTCTCGGGCTCGAATCT 95881
Query 114855 CTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTT 114914
| || | || || || |||| ||| | || || | ||| || ||||||| || |
Sbjct 95880 CCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCGTGCCAGGGCT 95821
Query 114915 CCAGGTACACCGCGATTGACCC------CTTACGACGACCAGCCTGGTTTACATACCTCG 114968
| ||||||| || | | || ||| | | || |||||| || || | |
Sbjct 95820 CAAGGTACATGGCAAAGGCTCCGGGTCGCTT--GTTG-CCTCCCTGGTCCACGTATCGGG 95764
Query 114969 CTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCC 115028
| ||| || | || || ||||| || | |||||| | || || || || ||
Sbjct 95763 CAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTGCCGG 95704
Query 115029 GAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCA 115086
|| || ||| | |||||| || | |||||| | ||| ||||| || || |
Sbjct 95703 CAATGTAGGAGCC--GGTGGCTCGGATGTTGTGGATGGAGAGACCGATACCGCCAGCAGA 95646
Query 115087 CTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTT 115146
||| || || | || || | |||| | ||||||| |||||||| ||||| ||||
Sbjct 95645 CTTGGAAATCAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTT 95586
Query 115147 ATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGT 115206
| || |||||| || |||||| || ||| || || ||||||||| |||||||
Sbjct 95585 CATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAGAGGGT 95526
Query 115207 TGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACGGCGG 115265
|| | |||||| | || ||| | || ||||| | | ||||||||| | | | ||
Sbjct 95525 GGGGGAAGCGTGGGT-AAAGTACTTCTGAGACATGTAGTTGTAGGTCTCGATGGCTCGGG 95467
Query 115266 GAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 115318
|||||| || ||||| || |||| || || ||||| | ||| | ||||||
Sbjct 95466 CAATGTCGTCACCGTGGATTCCGACGGACACTCGCATGATCATCTGCTGGGGT 95414
>seq3
Length=1361780
Score = 122 bits (134), Expect = 1e-22
Identities = 171/237 (72%), Gaps = 6/237 (3%)
Strand=Plus/Minus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || ||| ||||||||||| || || ||||| || || |||||| || ||
Sbjct 14915 GGCAAAGTCGGTGTGCAGACCCTCGTCTCGAGAAATGAGCTCGTTGGAGAAGGTGAGGCC 14856
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
||||||||||| |||||||| | |||||| || | || || || ||||| |||||
Sbjct 14855 GGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCTGAGAAAAAGAT 14796
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTC 126222
||||| || || || |||| ||| ||||| |||||| | |||| | || |
Sbjct 14795 ACCCTCGACGGCGGCAAAGGCAATGAGCCGCTCGCCAAAGGTG---GACTCCTCGTCGGA 14739
Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279
|| |||||| | ||||| | ||||| |||| ||| || |||| ||||| ||| ||
Sbjct 14738 AATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 14682
>seq1
Length=2434256
Score = 89.7 bits (98), Expect = 6e-13
Identities = 280/428 (65%), Gaps = 8/428 (2%)
Strand=Plus/Plus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
|| || |||||||| || || |||||||| |||||| | | | |||||||| |
Sbjct 1212439 CGTAGATAGTACATGCCTGTTTTGAGCCCGGCCTTCCATCCGTGGAAATGCATCGCTGTG 1212498
Query 113657 AACTTGGAGAGTGTTGGACTTTC---CATGAAGAGGTTCATACTTTGGGATTGATCGATG 113713
| ||| | | || || | || |||||| | ||| | | || || || || |||
Sbjct 1212499 ATTTTGCCGTGGGT--GA-TATCGGGCATGAAAATGTTGAGAGACTGCGACTGGTCAATG 1212555
Query 113714 AAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTT 113773
|| | | ||| ||||||||||||| || | | |||||| ||||| | ||
Sbjct 1212556 TAGGGAGCTCGAGCCGCCGCCATATCGATAATGTTGCGAGCCTTGATCTCCCAAGCGGTC 1212615
Query 113774 CTGTAGA-GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGC 113832
|| |||| || || | || | || ||||| | |||| | || || |||||| |
Sbjct 1212616 CTATAGACGGCTC-TGATGTGTTCGGGGATCTGGGTGATACTCTGTATCGAGCCATTGTC 1212674
Query 113833 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 113892
| || || | | ||||| |||| | ||| | || | ||| ||||||| | ||
Sbjct 1212675 GTGGATGATTCGGTTTTTCATCTCCTCGGTCCACATGCCCAGCTTGATGAGATCTTTCAT 1212734
Query 113893 GAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGT 113952
|| | |||| || | |||||| || || || || | ||| || || ||||
Sbjct 1212735 CAGCCAATGGTTGATCACCAGAAACTCGCCTGCCTGGACTCGACGCAGGTAAATGTTGGA 1212794
Query 113953 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCAT 114012
|||||| |||||||| ||||| |||| |||| || || | ||||| ||||| |||||
Sbjct 1212795 CGTGTACGGCTCAAAACACTCGTTGTGGCCCAGAATCTGAGAAGTGGACGCTGTAGGCAT 1212854
Query 114013 GGGTGCCA 114020
|| ||||
Sbjct 1212855 AGGAGCCA 1212862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353271455520
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