Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq24 425 5e-114
seq1 102 8e-17
>seq24
Length=170883
Score = 425 bits (470), Expect = 5e-114
Identities = 1220/1861 (66%), Gaps = 44/1861 (2%)
Strand=Plus/Plus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCT-CAAGATGGATGGCAG 93776
||| | ||||||| ||| ||||| |||||| | ||||| | | || | | ||
Sbjct 95343 TACAACTACTTTGGCTTTAAAACCCTGGAGCGAGCATACCTGTTGCGAG-TCAACGGAGC 95401
Query 93777 GGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGA 93836
||| |||||||||| || ||| || | ||||| || || |||| || ||||| ||||
Sbjct 95402 TGTTGCCGAGCGACCCCAGCAGATGATCATGCGAGTGTCCGTCGGAATCCACGGTGACGA 95461
Query 93837 CAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCA 93895
||| ||| | | | | || || ||||| | ||| | |||| ||
Sbjct 95462 CATTGCCCGAGCCATCGAGACCTA-CAACTACATGTCTCAGAAGTACTTTACCCACGCTT 95520
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955
|||| ||||| | |||||| || ||||| ||| |||||||| ||||||||||| | |
Sbjct 95521 CCCCCACCCTCTACAACGCTGGAACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTTGTCA 95580
Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015
| |||| |||||||||| ||| || | ||| | ||||||| |||||| || |
Sbjct 95581 ACATGAAGGACGACTCCATCGACGGCATCTACGATACCCTCAAGACCTGTGCTCTGATTT 95640
Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075
| || | || || || ||||| || ||||| || | || |||| || |||||||
Sbjct 95641 CCAAGTCTGCTGGCGGTATCGGTCTCTCCATCCACAACATCCGAGCCACCGGCTCCTACA 95700
Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135
| ||| ||||| || ||||||||||| |||| || ||||| || |||| |||||||
Sbjct 95701 TTGCCGGCACCAACGGAACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTACAACAACA 95760
Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195
| || || |||||||||||||| || | | | || | || || | || || |
Sbjct 95761 CTGCCCGATACGTGGACCAGGGAGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCTTG 95820
Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255
|||||||||||| ||| | | ||| ||| ||||||||||||||||| || ||
Sbjct 95821 AGCCCTGGCACGACGACATCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGAAAGGA-- 95878
Query 94256 TGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
||||| | ||| ||||||| ||| || || ||| | || || || || ||| | |
Sbjct 95879 -GGAGATTCGAGCCCGAGACCTGTTCCTGGCCCTGTGGATCCCCGATCTGTTCATGGAGC 95937
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372
| |||||| | ||| ||| |||| ||| | || ||||| || |||||||| ||| ||
Sbjct 95938 GAGTCGAGCAGAACGCCGAGTGGACTCTCATGTGCCCCAACGAGTGTCCCGGTCTGGACG 95997
Query 94373 ACGTTTGTGGATCG-CGTTTTGAAG-ACTTGTATGCTCGTTACGAATCGCAGGGC--AAG 94428
|||| | || || || || ||| | |||| | | ||||| | ||||| | |
Sbjct 95998 ACGTCTACGG--CGACGAGTTCAAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGAGG 96055
Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488
| | ||| || || |||||||||| | || || | ||| ||| |||
Sbjct 96056 TCGACGAA--CCATCCCCGCCCAGAAGCTGTGGTACCACATTCTCGACTGCCAGACCGAG 96113
Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548
| |||| |||| ||| | | |||||| || |||| |||||||||||| || ||
Sbjct 96114 TCCGGTAACCCCTTCATGCTCTACAAGGATGCTTGCAACCGAAAGTCCAACCAGAAGAAC 96173
Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608
||||| |||||| || || |||||| ||||||||||||||| ||||||| ||
Sbjct 96174 CTCGGAACCATCAAGTCTTCCAACCTGTGCTGCGAGATTGTCGAGTACTCTTCTCCCGAT 96233
Query 94609 GAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGT---GCGAGATGCC 94665
||| | ||||| || ||||||| |||||| |||| |||| || || ||||| |
Sbjct 96234 GAGGTGGCTGTTTGCAACCTGGCCTCCATTGCCCTGCCCACCTTTGTCACTCGAGA---C 96290
Query 94666 TACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTC 94725
|||| | ||| |||| | ||| | || |||| | |||| | || ||
Sbjct 96291 GACAC--CAACTCCTTC-TACGACTTCAAGAAGCTGCACGATATCGCCAAAGTCATTGTG 96347
Query 94726 TTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCA 94785
||||| ||| | |||||| |||| ||||||||| || ||||| |||| ||
Sbjct 96348 CGAAACCTCAACGCCATTATCGACCGAAACTACTACCCCGTTCCCGAGGCAAAGAAGTCC 96407
Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845
||| || ||||| || || | | || || |||||| | || ||| | | ||
Sbjct 96408 AACATGCGACATCGACCTATTGCTCTGGGTGTTCAGGGTCTGGCCGACACCTTCATGGCT 96467
Query 94846 ATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGC 94905
|||| || |||| || |||| ||| || | | || | | || ||||| | |
Sbjct 96468 CTGCGACTTCCCTTTGAGTCTGCCGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGACC 96527
Query 94906 ATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCG-----GACGGCGGGC 94960
|| || |||| ||| | | | || ||| | |||| | || | |||
Sbjct 96528 ATCTACCACGGAGCCGTCGA-------GGCCTCTT-ACGAGATGGCTCTTGAGGACGGTG 96579
Query 94961 CACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCA-TTTTTCAGTTCGACCTCTGG 95019
| |||| | |||| || || ||| ||||| | ||||||| ||||| |||
Sbjct 96580 CCTACGAGACCTTCCAGGGCTC-TCCTGCCTCCAGGGGAGACCTTCAGTTTGACCTGTGG 96638
Query 95020 GGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACAC 95079
|||| ||||| | || | || ||||| | ||| || || | || || |
Sbjct 96639 AACGTGACTCCCTCCGAGCTTTGGGAGTGGGACGATCTTAAGGCCAATATCATGAAGACC 96698
Query 95080 GGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTT 95139
||| || |||| ||||||| || || ||||||||||| |||||||| | ||||| ||
Sbjct 96699 GGTATGCGAAACTCGCTGCTGGTTGCTCCCATGCCCACCGCCTCCACCTCTCAGATTCTC 96758
Query 95140 GGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCC 95199
||| |||||||| ||||| |||| |||||||||| | ||| | || ||||| ||
Sbjct 96759 GGCTTCAACGAGTGCTTCGAGCCCTACACCTCCAACATTTACTCTCGACGAGTGCTTGCT 96818
Query 95200 GGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGG 95259
|| || |||| | ||||| || || ||||||| | ||| |||||
Sbjct 96819 GGCGAGTTCCAGATTGTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTTGGTCTGTGG 96878
Query 95260 GGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAA 95319
||| | | ||||||| | | | || |||||| ||||| ||||||||||| |
Sbjct 96879 AATGAGACCATGAAGAACCGAATCGTGGCCGACAACGGATCCGTGCAGAACATCCCCAAC 96938
Query 95320 ATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG-CGCGTGAT 95378
|| || |||| ||||||| || ||| |||||||||||||| ||||| ||| ||
Sbjct 96939 ATCCCCCAGGAGATCAAGGACCTGTACCGAACCGTGTGGGAGATTTCGCAGAAGCG-AAT 96997
Query 95379 ACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNNNN 95438
|||| || |||| ||| ||||||||| ||||
Sbjct 96998 CATCGAGATGGCTGCCGACCGATCGCCCTTCATTGACCAGTCCCAGTCCCTCAACATTCA 97057
Query 95439 NATGGCCGAGCCCAGTCGCGGAAAAATAACGTCCATGTTGTTCTACGGGTGGAGAAAGGG 95498
|| || |||| || || | || |||||| |||||||| |||| |||||
Sbjct 97058 CATCAAGGACCCCACCATGGGCAAGCTCACCTCCATGCACTTCTACGGCTGGAAGAAGGG 97117
Query 95499 TCTCAAGACCGGTATGTATTATTTGCGAACCAGGCCAAAGGCGGACTCCATACAGTTCGC 95558
||||||||| |||||||| || ||||||||| | | || | | |||| |||||| |
Sbjct 97118 TCTCAAGACTGGTATGTACTACCTGCGAACCATGGCTGCTGCCGCCCCCATCCAGTTCAC 97177
Query 95559 C 95559
|
Sbjct 97178 C 97178
>seq1
Length=2434256
Score = 102 bits (112), Expect = 8e-17
Identities = 579/914 (63%), Gaps = 14/914 (2%)
Strand=Plus/Minus
Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783
||||||| ||||||||| ||||| ||| | || || || | | | || | ||
Sbjct 1214252 TACTTTGGCTTCAAAACGCTGGAAAAGGCCTATCTGCTGAGAACCCAGGGAAACGTGGTG 1214193
Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843
|| ||||| || || |||| ||| | || || | || || |||||| ||||| | ||
Sbjct 1214192 GAACGACCCCAACATATGCTCATGAGAGTGGCTCTGGGTATCCACGGCAACGACCTCCCT 1214133
Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACC 93903
|| || | ||| | | || | ||| | || || || | || |||
Sbjct 1214132 AAGGTCCTCGATACTTACCAGGCTCTGTCGCTCAAAAAGTTCACACACGCTTCTCCAACC 1214073
Query 93904 CTGTTCAACGCGGGGAC--CCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACA 93961
|||||||| || || || ||||| |||| | | || || || || ||| | | | |
Sbjct 1214072 CTGTTCAATGCAGGCACTCCCCGGGGCCA--GCTATCGTCCTGCTTTCTGGTCGCCATGA 1214015
Query 93962 AGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA--TCTCAAA 94019
| ||||||||| ||| || | ||||| ||||| || ||||| ||| | |||||
Sbjct 1214014 GCGAAGACTCCATCGACGGCATCTACGACACTCTCAAA-AC-GTGCGCCCAAATTTCAAA 1213957
Query 94020 ATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCG 94079
||| || || || || | | ||||| || | | || | ||| || ||||
Sbjct 1213956 GACCGCAGGAGGCATAGGTCTGCATATCCACAACATCAGAGCTAAGGGCACCATCATCAC 1213897
Query 94080 CGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGC 94139
|| | | || | ||| ||| | || || |||||||| || ||||| ||| | ||
Sbjct 1213896 AGGCTCTCAGGGAAAATCCTCAGGCATTGTTCCCATGCTCCGAGTGTTCAATAACACAGC 1213837
Query 94140 GCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCC 94199
| ||||||||||| || || | | | || | || || ||||| | |||||
Sbjct 1213836 CAGATACGTGGACCAAGGCGGCAACAAGCGTCCTGGAGCGTTTGCAGTCTACTTGGAGCC 1213777
Query 94200 CTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGA 94259
||||| ||||| | || |||| | | ||||| || |||||||| ||| |
Sbjct 1213776 ATGGCATGCGGATATTTTGGATTTCTTGAATCTGCGCAAAAACCACGGAGCCGAGGAAAA 1213717
Query 94260 GAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGA 94319
|| || | || ||||| ||||| | ||||| || || || || ||||| | |||||
Sbjct 1213716 CAGAGCACGTGATCTCTTTTACGCATTATGGGTTCCCGATCTGTTCATGAAGAGAGTCGA 1213657
Query 94320 GAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTG 94379
| | | ||| ||||| |||||||| | |||||||||| | ||| | ||
Sbjct 1213656 AAGAGGCGAGAAATGGTCGCTTTTCTGTCCCAAAAAGGCTCCCGGACTGGCAGACATCTG 1213597
Query 94380 TGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGGCAAGGCCAGGAAGG 94438
||| | ||| || | ||| | ||||| || | | || | || |
Sbjct 1213596 GGGACCTGATTTCGACCGCAAGTACGAAGAGTACGAGTCTCGAAAGC-TGTACAACTCGC 1213538
Query 94439 TTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGC 94498
|| || || | |||||| | ||| || ||| | || || || | ||
Sbjct 1213537 AAATCGACGCCCAGGAGCTGTTCAAGGCGATTCTGACAAGCCAGATTGAAACTGG-AGGC 1213479
Query 94499 CC-TACATCTTGTTCAAGGAC-TCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGT 94556
|| | ||| ||| || ||| ||| |||||| || ||||||||| || | |||||
Sbjct 1213478 CCGTTCATGCTGTATAAAGACAGCTG-CAACGCGAAATCCAACCAGAAGAATCTCGGCAC 1213420
Query 94557 GATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGC 94616
||||| || ||||||||||| ||||||||| |||| | ||||| || ||| | ||
Sbjct 1213419 CATCAAATCGTCCAATCTGTGCACTGAGATTGTCCAGTACTCGTCTCCCGAAGAGGTGGC 1213360
Query 94617 TGTGTGTAACCTGG 94630
||| || |||||||
Sbjct 1213359 TGTTTGCAACCTGG 1213346
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722927902240
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