Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq24 425 5e-114 seq1 102 8e-17 >seq24 Length=170883 Score = 425 bits (470), Expect = 5e-114 Identities = 1220/1861 (66%), Gaps = 44/1861 (2%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCT-CAAGATGGATGGCAG 93776 ||| | ||||||| ||| ||||| |||||| | ||||| | | || | | || Sbjct 95343 TACAACTACTTTGGCTTTAAAACCCTGGAGCGAGCATACCTGTTGCGAG-TCAACGGAGC 95401 Query 93777 GGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGA 93836 ||| |||||||||| || ||| || | ||||| || || |||| || ||||| |||| Sbjct 95402 TGTTGCCGAGCGACCCCAGCAGATGATCATGCGAGTGTCCGTCGGAATCCACGGTGACGA 95461 Query 93837 CAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCA 93895 ||| ||| | | | | || || ||||| | ||| | |||| || Sbjct 95462 CATTGCCCGAGCCATCGAGACCTA-CAACTACATGTCTCAGAAGTACTTTACCCACGCTT 95520 Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| ||||| | |||||| || ||||| ||| |||||||| ||||||||||| | | Sbjct 95521 CCCCCACCCTCTACAACGCTGGAACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTTGTCA 95580 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | |||| |||||||||| ||| || | ||| | ||||||| |||||| || | Sbjct 95581 ACATGAAGGACGACTCCATCGACGGCATCTACGATACCCTCAAGACCTGTGCTCTGATTT 95640 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 | || | || || || ||||| || ||||| || | || |||| || ||||||| Sbjct 95641 CCAAGTCTGCTGGCGGTATCGGTCTCTCCATCCACAACATCCGAGCCACCGGCTCCTACA 95700 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 | ||| ||||| || ||||||||||| |||| || ||||| || |||| ||||||| Sbjct 95701 TTGCCGGCACCAACGGAACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTACAACAACA 95760 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 | || || |||||||||||||| || | | | || | || || | || || | Sbjct 95761 CTGCCCGATACGTGGACCAGGGAGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCTTG 95820 Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255 |||||||||||| ||| | | ||| ||| ||||||||||||||||| || || Sbjct 95821 AGCCCTGGCACGACGACATCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGAAAGGA-- 95878 Query 94256 TGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 ||||| | ||| ||||||| ||| || || ||| | || || || || ||| | | Sbjct 95879 -GGAGATTCGAGCCCGAGACCTGTTCCTGGCCCTGTGGATCCCCGATCTGTTCATGGAGC 95937 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | |||||| | ||| ||| |||| ||| | || ||||| || |||||||| ||| || Sbjct 95938 GAGTCGAGCAGAACGCCGAGTGGACTCTCATGTGCCCCAACGAGTGTCCCGGTCTGGACG 95997 Query 94373 ACGTTTGTGGATCG-CGTTTTGAAG-ACTTGTATGCTCGTTACGAATCGCAGGGC--AAG 94428 |||| | || || || || ||| | |||| | | ||||| | ||||| | | Sbjct 95998 ACGTCTACGG--CGACGAGTTCAAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGAGG 96055 Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488 | | ||| || || |||||||||| | || || | ||| ||| ||| Sbjct 96056 TCGACGAA--CCATCCCCGCCCAGAAGCTGTGGTACCACATTCTCGACTGCCAGACCGAG 96113 Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548 | |||| |||| ||| | | |||||| || |||| |||||||||||| || || Sbjct 96114 TCCGGTAACCCCTTCATGCTCTACAAGGATGCTTGCAACCGAAAGTCCAACCAGAAGAAC 96173 Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608 ||||| |||||| || || |||||| ||||||||||||||| ||||||| || Sbjct 96174 CTCGGAACCATCAAGTCTTCCAACCTGTGCTGCGAGATTGTCGAGTACTCTTCTCCCGAT 96233 Query 94609 GAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGT---GCGAGATGCC 94665 ||| | ||||| || ||||||| |||||| |||| |||| || || ||||| | Sbjct 96234 GAGGTGGCTGTTTGCAACCTGGCCTCCATTGCCCTGCCCACCTTTGTCACTCGAGA---C 96290 Query 94666 TACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTC 94725 |||| | ||| |||| | ||| | || |||| | |||| | || || Sbjct 96291 GACAC--CAACTCCTTC-TACGACTTCAAGAAGCTGCACGATATCGCCAAAGTCATTGTG 96347 Query 94726 TTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCA 94785 ||||| ||| | |||||| |||| ||||||||| || ||||| |||| || Sbjct 96348 CGAAACCTCAACGCCATTATCGACCGAAACTACTACCCCGTTCCCGAGGCAAAGAAGTCC 96407 Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845 ||| || ||||| || || | | || || |||||| | || ||| | | || Sbjct 96408 AACATGCGACATCGACCTATTGCTCTGGGTGTTCAGGGTCTGGCCGACACCTTCATGGCT 96467 Query 94846 ATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGC 94905 |||| || |||| || |||| ||| || | | || | | || ||||| | | Sbjct 96468 CTGCGACTTCCCTTTGAGTCTGCCGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGACC 96527 Query 94906 ATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCG-----GACGGCGGGC 94960 || || |||| ||| | | | || ||| | |||| | || | ||| Sbjct 96528 ATCTACCACGGAGCCGTCGA-------GGCCTCTT-ACGAGATGGCTCTTGAGGACGGTG 96579 Query 94961 CACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCA-TTTTTCAGTTCGACCTCTGG 95019 | |||| | |||| || || ||| ||||| | ||||||| ||||| ||| Sbjct 96580 CCTACGAGACCTTCCAGGGCTC-TCCTGCCTCCAGGGGAGACCTTCAGTTTGACCTGTGG 96638 Query 95020 GGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACAC 95079 |||| ||||| | || | || ||||| | ||| || || | || || | Sbjct 96639 AACGTGACTCCCTCCGAGCTTTGGGAGTGGGACGATCTTAAGGCCAATATCATGAAGACC 96698 Query 95080 GGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTT 95139 ||| || |||| ||||||| || || ||||||||||| |||||||| | ||||| || Sbjct 96699 GGTATGCGAAACTCGCTGCTGGTTGCTCCCATGCCCACCGCCTCCACCTCTCAGATTCTC 96758 Query 95140 GGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCC 95199 ||| |||||||| ||||| |||| |||||||||| | ||| | || ||||| || Sbjct 96759 GGCTTCAACGAGTGCTTCGAGCCCTACACCTCCAACATTTACTCTCGACGAGTGCTTGCT 96818 Query 95200 GGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGG 95259 || || |||| | ||||| || || ||||||| | ||| ||||| Sbjct 96819 GGCGAGTTCCAGATTGTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTTGGTCTGTGG 96878 Query 95260 GGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAA 95319 ||| | | ||||||| | | | || |||||| ||||| ||||||||||| | Sbjct 96879 AATGAGACCATGAAGAACCGAATCGTGGCCGACAACGGATCCGTGCAGAACATCCCCAAC 96938 Query 95320 ATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG-CGCGTGAT 95378 || || |||| ||||||| || ||| |||||||||||||| ||||| ||| || Sbjct 96939 ATCCCCCAGGAGATCAAGGACCTGTACCGAACCGTGTGGGAGATTTCGCAGAAGCG-AAT 96997 Query 95379 ACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNNNN 95438 |||| || |||| ||| ||||||||| |||| Sbjct 96998 CATCGAGATGGCTGCCGACCGATCGCCCTTCATTGACCAGTCCCAGTCCCTCAACATTCA 97057 Query 95439 NATGGCCGAGCCCAGTCGCGGAAAAATAACGTCCATGTTGTTCTACGGGTGGAGAAAGGG 95498 || || |||| || || | || |||||| |||||||| |||| ||||| Sbjct 97058 CATCAAGGACCCCACCATGGGCAAGCTCACCTCCATGCACTTCTACGGCTGGAAGAAGGG 97117 Query 95499 TCTCAAGACCGGTATGTATTATTTGCGAACCAGGCCAAAGGCGGACTCCATACAGTTCGC 95558 ||||||||| |||||||| || ||||||||| | | || | | |||| |||||| | Sbjct 97118 TCTCAAGACTGGTATGTACTACCTGCGAACCATGGCTGCTGCCGCCCCCATCCAGTTCAC 97177 Query 95559 C 95559 | Sbjct 97178 C 97178 >seq1 Length=2434256 Score = 102 bits (112), Expect = 8e-17 Identities = 579/914 (63%), Gaps = 14/914 (2%) Strand=Plus/Minus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||||| ||||||||| ||||| ||| | || || || | | | || | || Sbjct 1214252 TACTTTGGCTTCAAAACGCTGGAAAAGGCCTATCTGCTGAGAACCCAGGGAAACGTGGTG 1214193 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843 || ||||| || || |||| ||| | || || | || || |||||| ||||| | || Sbjct 1214192 GAACGACCCCAACATATGCTCATGAGAGTGGCTCTGGGTATCCACGGCAACGACCTCCCT 1214133 Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACC 93903 || || | ||| | | || | ||| | || || || | || ||| Sbjct 1214132 AAGGTCCTCGATACTTACCAGGCTCTGTCGCTCAAAAAGTTCACACACGCTTCTCCAACC 1214073 Query 93904 CTGTTCAACGCGGGGAC--CCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACA 93961 |||||||| || || || ||||| |||| | | || || || || ||| | | | | Sbjct 1214072 CTGTTCAATGCAGGCACTCCCCGGGGCCA--GCTATCGTCCTGCTTTCTGGTCGCCATGA 1214015 Query 93962 AGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA--TCTCAAA 94019 | ||||||||| ||| || | ||||| ||||| || ||||| ||| | ||||| Sbjct 1214014 GCGAAGACTCCATCGACGGCATCTACGACACTCTCAAA-AC-GTGCGCCCAAATTTCAAA 1213957 Query 94020 ATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCG 94079 ||| || || || || | | ||||| || | | || | ||| || |||| Sbjct 1213956 GACCGCAGGAGGCATAGGTCTGCATATCCACAACATCAGAGCTAAGGGCACCATCATCAC 1213897 Query 94080 CGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGC 94139 || | | || | ||| ||| | || || |||||||| || ||||| ||| | || Sbjct 1213896 AGGCTCTCAGGGAAAATCCTCAGGCATTGTTCCCATGCTCCGAGTGTTCAATAACACAGC 1213837 Query 94140 GCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCC 94199 | ||||||||||| || || | | | || | || || ||||| | ||||| Sbjct 1213836 CAGATACGTGGACCAAGGCGGCAACAAGCGTCCTGGAGCGTTTGCAGTCTACTTGGAGCC 1213777 Query 94200 CTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGA 94259 ||||| ||||| | || |||| | | ||||| || |||||||| ||| | Sbjct 1213776 ATGGCATGCGGATATTTTGGATTTCTTGAATCTGCGCAAAAACCACGGAGCCGAGGAAAA 1213717 Query 94260 GAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGA 94319 || || | || ||||| ||||| | ||||| || || || || ||||| | ||||| Sbjct 1213716 CAGAGCACGTGATCTCTTTTACGCATTATGGGTTCCCGATCTGTTCATGAAGAGAGTCGA 1213657 Query 94320 GAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTG 94379 | | | ||| ||||| |||||||| | |||||||||| | ||| | || Sbjct 1213656 AAGAGGCGAGAAATGGTCGCTTTTCTGTCCCAAAAAGGCTCCCGGACTGGCAGACATCTG 1213597 Query 94380 TGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGGCAAGGCCAGGAAGG 94438 ||| | ||| || | ||| | ||||| || | | || | || | Sbjct 1213596 GGGACCTGATTTCGACCGCAAGTACGAAGAGTACGAGTCTCGAAAGC-TGTACAACTCGC 1213538 Query 94439 TTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGC 94498 || || || | |||||| | ||| || ||| | || || || | || Sbjct 1213537 AAATCGACGCCCAGGAGCTGTTCAAGGCGATTCTGACAAGCCAGATTGAAACTGG-AGGC 1213479 Query 94499 CC-TACATCTTGTTCAAGGAC-TCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGT 94556 || | ||| ||| || ||| ||| |||||| || ||||||||| || | ||||| Sbjct 1213478 CCGTTCATGCTGTATAAAGACAGCTG-CAACGCGAAATCCAACCAGAAGAATCTCGGCAC 1213420 Query 94557 GATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGC 94616 ||||| || ||||||||||| ||||||||| |||| | ||||| || ||| | || Sbjct 1213419 CATCAAATCGTCCAATCTGTGCACTGAGATTGTCCAGTACTCGTCTCCCGAAGAGGTGGC 1213360 Query 94617 TGTGTGTAACCTGG 94630 ||| || ||||||| Sbjct 1213359 TGTTTGCAACCTGG 1213346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722927902240