Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq24 179 4e-40
seq3 143 3e-29
seq4 107 2e-18
seq14 96.9 3e-15
>seq24
Length=170883
Score = 179 bits (198), Expect = 4e-40
Identities = 918/1449 (63%), Gaps = 31/1449 (2%)
Strand=Plus/Minus
Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087
||||||| | || |||||||| || | |||||||| | || | ||| ||| | |
Sbjct 96840 GGTTGACAATCTGGAACTCGCCAGCAAGCACTCGTCGAGAGTAAATGTTGGAGGTGTAGG 96781
Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147
| || ||| | ||||| ||| || || |||| |||| ||||| |||||| || |
Sbjct 96780 GCTCGAAGCACTCGTTGAAGCCGAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGAGCAA 96721
Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207
||| || || || |||| ||| | || | | |||| | | | ||| ||||
Sbjct 96720 CCAGCAGCGAGTTTCGCATACCGGTCTTCATGATATTGGCCTTAAGATCGTCCCACTCCC 96661
Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGAC 153267
| ||| | || || ||| ||||||||| ||| |||| | |||| | ||| |||
Sbjct 96660 AAAGCTCGGAGGGAGTCACGTTCCACAGGTCAAACTGAAGGTCTCCCCTGGAGGCAGGAG 96601
Query 153268 TGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGCG 153327
||| || || |||| ||||| | |||| ||| | ||||||| |
Sbjct 96600 AGCCCTGGAAGGTCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGAGGCCTCGACGG 96541
Query 153328 CGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCGT 153387
| || | ||| ||||| ||| ||| || | ||||| || || | |||
Sbjct 96540 CTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCAGACTCAA 96481
Query 153388 ACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTC 153447
| || | ||||| || |||| ||||||||||||||| | ||| | | || ||||
Sbjct 96480 AGGGAAGTCGCAGAGCCATGAAGGTGTCGGCCAGACCCTGAACACCCAGAGCAATAGGTC 96421
Query 153448 GATGCTTCTCGTTG-----CTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGAT 153502
|||| | |||| || |||||| | || || |||| || || |||||
Sbjct 96420 GATGTCGCATGTTGGACTTCTTTGCCTCGGGAACG-----GGGTAGTAGTTTCGGTCGAT 96366
Query 153503 AATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATA 153562
||| ||||||||| ||||| | ||||| | || | | || |||| ||| || ||
Sbjct 96365 AATGGCGTTGAGGTTTCGCACAATGACTTTGGCGATATCGTGCAGCTTCTTGAAGTCGTA 96306
Query 153563 GGTC-ATTTCGT--CGACGCGTACG-CATCGATT--CACGGCAATAGACGCCAGATTACA 153616
| | || || || | || | || | | || |||||| || ||||| || ||
Sbjct 96305 GAAGGAGTTGGTGTCGTCTCGAGTGACAAAGGTGGGCAGGGCAATGGAGGCCAGGTTGCA 96246
Query 153617 GACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTT 153676
|| ||| ||| |||| ||||| || |||||| ||| |||||| | ||
Sbjct 96245 AACAGCCACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAGCACAGGTTGGAAGACTT 96186
Query 153677 TATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTA 153736
||| || | || | ||| ||| || || ||||| || || ||| |||||||| |
Sbjct 96185 GATGGTTCCGAGGTTCTTCTGGTTGGACTTTCGGTTGCAAGCATCCTTGTAGAGCATGAA 96126
Query 153737 CGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAA---ACCTATGCAGGTCCTGCGCTCG 153793
|| |||| |||| || |||| || ||| ||| | ||| || |
Sbjct 96125 GGGGTTACCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCA---CAGCTTCTGGGCGGG 96069
Query 153794 CACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTC 153853
| | ||| |||||||| ||||||| |||||||||| ||| ||||||||
Sbjct 96068 GATGGTTCGTCGACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTTGAACTCGTC 96009
Query 153854 GCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCG-T 153912
||||||| |||| | || |||||||||| | || ||||| || | |||| || |
Sbjct 96008 GCCGTAGACGTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTCCACTCGGCGTT 95949
Query 153913 CGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCG 153972
| || | ||| || |||||||||||| || | ||| || || | ||||| || |
Sbjct 95948 CTGC-TCGACTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACAGGTCTCG-G 95891
Query 153973 CCTTGCA-ATCCTCCGCGCCCATGTTGCGTTTCAGATTG-AGCACGCTATAGATGTCGGC 154030
|| | | |||||| || ||| | ||| | | || || | | |||||||| |
Sbjct 95890 GCTCGAATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGA-AGATGTCGTC 95832
Query 154031 GTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGAC 154087
||||||||| |||| ||| | ||| | ||| || ||| || || ||||| || ||
Sbjct 95831 GTGCCAGGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCCTGGTCCAC 95772
Query 154088 GTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTT 154147
|| || | | |||||| |||| |||| |||||| | | ||| | | ||| |||||
Sbjct 95771 GTATCGGGCAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGGTTCCGTT 95712
Query 154148 GGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCC 154207
||| || | | |||| ||| || | | || | | | || || |||||
Sbjct 95711 GGTGCCGGCAATGTAGGAGCCGGTGGCTCGGATGTTGTGGATGGAGAGACCGATACCGCC 95652
Query 154208 GCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATC 154267
| |||| || || ||| ||| || || |||||||||||||||| ||
Sbjct 95651 AGCAGACTTGGAAATCAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATGGAGTC 95592
Query 154268 GTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAA 154327
||| | | || | ||||||||| |||| || || | | ||||| || |
Sbjct 95591 GTCCTTCATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCCAGCGTTGTA 95532
Query 154328 GAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGC 154387
||||||||| ||||| ||||| || || ||| | ||| || ||||||||
Sbjct 95531 GAGGGTGGGGGAAGCGTGGGTAAAGTACTTCTGAGACATGTAGTTGTAGGTCTCGATGGC 95472
Query 154388 GTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACG 154447
| || || || ||||| || |||| | || ||||||| ||| ||||| || ||
Sbjct 95471 TCGGGCAATGTCGTCACCGTGGATTCCGACGGACACTCGCATGATCATCTGCTGGGGTCG 95412
Query 154448 TTCGGCGAC 154456
||||| ||
Sbjct 95411 CTCGGCAAC 95403
>seq3
Length=1361780
Score = 143 bits (158), Expect = 3e-29
Identities = 302/447 (68%), Gaps = 9/447 (2%)
Strand=Plus/Plus
Query 52394 CGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGC 52453
|||||| | | ||||| ||| |||||||| | ||||| || ||| || ||| |
Sbjct 14762 CGAGCGGCTCATTGCCTTTGCCGCCGTCGAGGGTATCTTTTTCTCAGGCTCTTTCGCCTC 14821
Query 52454 CATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGAT 52513
|||||| | | || | | ||| | ||||||||||| || ||| ||||||| | ||
Sbjct 14822 CATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCAT 14881
Query 52514 ATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGAC 52573
|| || ||||| || |||||||| |||||||| || || || | | | | |
Sbjct 14882 TTCTCGAGACGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCT---CTCACCT--- 14935
Query 52574 CGAAAAATTGGATTCGGACACGATCCT-GAGCATGTTCAAG--GAGGCGGTGGCTATCGA 52630
||| || || | | ||| | ||| | || | ||||| || | |||||
Sbjct 14936 CGAGAACCGACCCTCCAAGAAGATTGTCGAGGACGTCATTGTCGAGGCTGTTGGCATCGA 14995
Query 52631 AAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCAT 52690
||||||| | || | ||| ||||| | ||||| ||||||||||| || |||
Sbjct 14996 GCAGGAGTTCCTGACCGACGCTCTGCCCTGTGGTCTGCTCGGCATGAACGCCAAGCTCAT 15055
Query 52691 GTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTA 52750
|||| ||||||| |||||||| || || || ||| |||| ||||| | | |||
Sbjct 15056 GTGCCAGTACATTGAGTTTGTCGCCGACCGACTGCTGGTTGCTCTCGGCAACACCAAGGT 15115
Query 52751 CTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAA 52810
|| |||| | ||| || || || || ||| | ||||| || || | || ||||||||
Sbjct 15116 CTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGCCGGTAAGACCAA 15175
Query 52811 CTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||| ||||||||||||||| ||| ||
Sbjct 15176 CTTCTTCGAGAAGCGAGTCTCCGACTA 15202
Score = 96.9 bits (106), Expect = 3e-15
Identities = 157/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| ||||| | |||| ||| | ||| | | |||||||| || |||||||||||
Sbjct 557871 CCTCCTCGGAGTCGCAGAACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 557812
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||||||||| || || |||| | || || ||||| |||||||| ||
Sbjct 557811 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGG 557752
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || || | | || | |||||| | |||||||||
Sbjct 557751 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCCACC 557692
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCA 138613
|||| || | || || ||||| || || || ||||| || ||||
Sbjct 557691 TCGAGGGTGATAGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 557646
>seq4
Length=1325655
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| ||||| | |||| ||| | ||| | | |||||||| || |||||||||||
Sbjct 386812 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 386753
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||||||| || ||||||| |||| || ||||| |||||||| ||
Sbjct 386752 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 386693
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || || | | || | |||||||| |||||||||
Sbjct 386692 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 386633
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || ||||| || || || || ||||| ||||||||
Sbjct 386632 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAGATCTGCAT 386586
>seq14
Length=605277
Score = 96.9 bits (106), Expect = 3e-15
Identities = 141/196 (72%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| | || || |||||| || || || || | |
Sbjct 299742 GACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCGGCCGTCCTCAAGCTGCTTTCCAGCA 299801
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538
| || || ||||| |||||||| || || || || ||||| ||| | || | ||
Sbjct 299802 AAAATCAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC-CTGAATCTTAGACTTGAC 299860
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
|||| || | |||||||| ||||| ||||||| || | || || |||||||| || |
Sbjct 299861 ATTG-TCAATGGTGTCGGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTCAGGGTCT 299919
Query 138599 TTACAAAAATCTGCAT 138614
| ||||| ||||||||
Sbjct 299920 TGACAAAGATCTGCAT 299935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262127055680
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