Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq24 179 4e-40 seq3 143 3e-29 seq4 107 2e-18 seq14 96.9 3e-15 >seq24 Length=170883 Score = 179 bits (198), Expect = 4e-40 Identities = 918/1449 (63%), Gaps = 31/1449 (2%) Strand=Plus/Minus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| | || |||||||| || | |||||||| | || | ||| ||| | | Sbjct 96840 GGTTGACAATCTGGAACTCGCCAGCAAGCACTCGTCGAGAGTAAATGTTGGAGGTGTAGG 96781 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | || ||| | ||||| ||| || || |||| |||| ||||| |||||| || | Sbjct 96780 GCTCGAAGCACTCGTTGAAGCCGAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGAGCAA 96721 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207 ||| || || || |||| ||| | || | | |||| | | | ||| |||| Sbjct 96720 CCAGCAGCGAGTTTCGCATACCGGTCTTCATGATATTGGCCTTAAGATCGTCCCACTCCC 96661 Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGAC 153267 | ||| | || || ||| ||||||||| ||| |||| | |||| | ||| ||| Sbjct 96660 AAAGCTCGGAGGGAGTCACGTTCCACAGGTCAAACTGAAGGTCTCCCCTGGAGGCAGGAG 96601 Query 153268 TGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGCG 153327 ||| || || |||| ||||| | |||| ||| | ||||||| | Sbjct 96600 AGCCCTGGAAGGTCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGAGGCCTCGACGG 96541 Query 153328 CGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCGT 153387 | || | ||| ||||| ||| ||| || | ||||| || || | ||| Sbjct 96540 CTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCAGACTCAA 96481 Query 153388 ACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTC 153447 | || | ||||| || |||| ||||||||||||||| | ||| | | || |||| Sbjct 96480 AGGGAAGTCGCAGAGCCATGAAGGTGTCGGCCAGACCCTGAACACCCAGAGCAATAGGTC 96421 Query 153448 GATGCTTCTCGTTG-----CTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGAT 153502 |||| | |||| || |||||| | || || |||| || || ||||| Sbjct 96420 GATGTCGCATGTTGGACTTCTTTGCCTCGGGAACG-----GGGTAGTAGTTTCGGTCGAT 96366 Query 153503 AATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATA 153562 ||| ||||||||| ||||| | ||||| | || | | || |||| ||| || || Sbjct 96365 AATGGCGTTGAGGTTTCGCACAATGACTTTGGCGATATCGTGCAGCTTCTTGAAGTCGTA 96306 Query 153563 GGTC-ATTTCGT--CGACGCGTACG-CATCGATT--CACGGCAATAGACGCCAGATTACA 153616 | | || || || | || | || | | || |||||| || ||||| || || Sbjct 96305 GAAGGAGTTGGTGTCGTCTCGAGTGACAAAGGTGGGCAGGGCAATGGAGGCCAGGTTGCA 96246 Query 153617 GACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTT 153676 || ||| ||| |||| ||||| || |||||| ||| |||||| | || Sbjct 96245 AACAGCCACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAGCACAGGTTGGAAGACTT 96186 Query 153677 TATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTA 153736 ||| || | || | ||| ||| || || ||||| || || ||| |||||||| | Sbjct 96185 GATGGTTCCGAGGTTCTTCTGGTTGGACTTTCGGTTGCAAGCATCCTTGTAGAGCATGAA 96126 Query 153737 CGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAA---ACCTATGCAGGTCCTGCGCTCG 153793 || |||| |||| || |||| || ||| ||| | ||| || | Sbjct 96125 GGGGTTACCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCA---CAGCTTCTGGGCGGG 96069 Query 153794 CACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTC 153853 | | ||| |||||||| ||||||| |||||||||| ||| |||||||| Sbjct 96068 GATGGTTCGTCGACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTTGAACTCGTC 96009 Query 153854 GCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCG-T 153912 ||||||| |||| | || |||||||||| | || ||||| || | |||| || | Sbjct 96008 GCCGTAGACGTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTCCACTCGGCGTT 95949 Query 153913 CGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCG 153972 | || | ||| || |||||||||||| || | ||| || || | ||||| || | Sbjct 95948 CTGC-TCGACTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACAGGTCTCG-G 95891 Query 153973 CCTTGCA-ATCCTCCGCGCCCATGTTGCGTTTCAGATTG-AGCACGCTATAGATGTCGGC 154030 || | | |||||| || ||| | ||| | | || || | | |||||||| | Sbjct 95890 GCTCGAATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGA-AGATGTCGTC 95832 Query 154031 GTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGAC 154087 ||||||||| |||| ||| | ||| | ||| || ||| || || ||||| || || Sbjct 95831 GTGCCAGGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCCTGGTCCAC 95772 Query 154088 GTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTT 154147 || || | | |||||| |||| |||| |||||| | | ||| | | ||| ||||| Sbjct 95771 GTATCGGGCAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGGTTCCGTT 95712 Query 154148 GGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCC 154207 ||| || | | |||| ||| || | | || | | | || || ||||| Sbjct 95711 GGTGCCGGCAATGTAGGAGCCGGTGGCTCGGATGTTGTGGATGGAGAGACCGATACCGCC 95652 Query 154208 GCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATC 154267 | |||| || || ||| ||| || || |||||||||||||||| || Sbjct 95651 AGCAGACTTGGAAATCAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATGGAGTC 95592 Query 154268 GTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAA 154327 ||| | | || | ||||||||| |||| || || | | ||||| || | Sbjct 95591 GTCCTTCATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCCAGCGTTGTA 95532 Query 154328 GAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGC 154387 ||||||||| ||||| ||||| || || ||| | ||| || |||||||| Sbjct 95531 GAGGGTGGGGGAAGCGTGGGTAAAGTACTTCTGAGACATGTAGTTGTAGGTCTCGATGGC 95472 Query 154388 GTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACG 154447 | || || || ||||| || |||| | || ||||||| ||| ||||| || || Sbjct 95471 TCGGGCAATGTCGTCACCGTGGATTCCGACGGACACTCGCATGATCATCTGCTGGGGTCG 95412 Query 154448 TTCGGCGAC 154456 ||||| || Sbjct 95411 CTCGGCAAC 95403 >seq3 Length=1361780 Score = 143 bits (158), Expect = 3e-29 Identities = 302/447 (68%), Gaps = 9/447 (2%) Strand=Plus/Plus Query 52394 CGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGC 52453 |||||| | | ||||| ||| |||||||| | ||||| || ||| || ||| | Sbjct 14762 CGAGCGGCTCATTGCCTTTGCCGCCGTCGAGGGTATCTTTTTCTCAGGCTCTTTCGCCTC 14821 Query 52454 CATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGAT 52513 |||||| | | || | | ||| | ||||||||||| || ||| ||||||| | || Sbjct 14822 CATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCAT 14881 Query 52514 ATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGAC 52573 || || ||||| || |||||||| |||||||| || || || | | | | | Sbjct 14882 TTCTCGAGACGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCT---CTCACCT--- 14935 Query 52574 CGAAAAATTGGATTCGGACACGATCCT-GAGCATGTTCAAG--GAGGCGGTGGCTATCGA 52630 ||| || || | | ||| | ||| | || | ||||| || | ||||| Sbjct 14936 CGAGAACCGACCCTCCAAGAAGATTGTCGAGGACGTCATTGTCGAGGCTGTTGGCATCGA 14995 Query 52631 AAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCAT 52690 ||||||| | || | ||| ||||| | ||||| ||||||||||| || ||| Sbjct 14996 GCAGGAGTTCCTGACCGACGCTCTGCCCTGTGGTCTGCTCGGCATGAACGCCAAGCTCAT 15055 Query 52691 GTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTA 52750 |||| ||||||| |||||||| || || || ||| |||| ||||| | | ||| Sbjct 15056 GTGCCAGTACATTGAGTTTGTCGCCGACCGACTGCTGGTTGCTCTCGGCAACACCAAGGT 15115 Query 52751 CTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAA 52810 || |||| | ||| || || || || ||| | ||||| || || | || |||||||| Sbjct 15116 CTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGCCGGTAAGACCAA 15175 Query 52811 CTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||| ||||||||||||||| ||| || Sbjct 15176 CTTCTTCGAGAAGCGAGTCTCCGACTA 15202 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | |||| ||| | ||| | | |||||||| || ||||||||||| Sbjct 557871 CCTCCTCGGAGTCGCAGAACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 557812 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||||||| || || |||| | || || ||||| |||||||| || Sbjct 557811 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGG 557752 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | |||||| | ||||||||| Sbjct 557751 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCCACC 557692 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCA 138613 |||| || | || || ||||| || || || ||||| || |||| Sbjct 557691 TCGAGGGTGATAGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 557646 >seq4 Length=1325655 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | |||| ||| | ||| | | |||||||| || ||||||||||| Sbjct 386812 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 386753 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| || ||||||| |||| || ||||| |||||||| || Sbjct 386752 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 386693 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | |||||||| ||||||||| Sbjct 386692 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 386633 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| || || || || ||||| |||||||| Sbjct 386632 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAGATCTGCAT 386586 >seq14 Length=605277 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || |||||| || || || || | | Sbjct 299742 GACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCGGCCGTCCTCAAGCTGCTTTCCAGCA 299801 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 | || || ||||| |||||||| || || || || ||||| ||| | || | || Sbjct 299802 AAAATCAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC-CTGAATCTTAGACTTGAC 299860 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | |||||||| ||||| ||||||| || | || || |||||||| || | Sbjct 299861 ATTG-TCAATGGTGTCGGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTCAGGGTCT 299919 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 299920 TGACAAAGATCTGCAT 299935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262127055680