Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq24 203 4e-47
seq3 134 2e-26
seq1 89.7 6e-13
>seq24
Length=170883
Score = 203 bits (224), Expect = 4e-47
Identities = 1138/1794 (63%), Gaps = 57/1794 (3%)
Strand=Plus/Minus
Query 115519 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 115578
|||| | ||||||| ||||| || ||| | | ||| ||||||||||| || |||
Sbjct 97183 TCAATGGTGAACTGGATGGGGGCGGCAGCAGCCATGGTTCGCAGGTAGTACATACCAGTC 97124
Query 115579 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTT 115638
||||| |||| ||||||| | || | ||||| |||| | |||| | || ||
Sbjct 97123 TTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAGGTGAGCTTGCCCATGGTGGGG--- 97067
Query 115639 TCCATGAAGAG---GTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCC 115695
||| ||| | | ||| | ||||| || || |||||| | || || || |||
Sbjct 97066 TCCTTGATGTGAATGTTGAGGGACTGGGACTGGTCAATGAAGGGCGATCGGTCGGCAGCC 97007
Query 115696 ATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCA 115755
|| || || | |||| | || |||||||| |||| ||| |||| ||| || ||
Sbjct 97006 ATCTCGATGATTCGCTTCTGCGAAATCTCCCACACGGTTCGGTACAGGTCCTTGATCTCC 96947
Query 115756 TCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGA---GATCCTTC 115812
| ||||| | ||| || || | || || || | | ||| || | | ||||
Sbjct 96946 TGGGGGATGTTGGGGATGTTCTGCACGGATCCGT-TGTC--GGCCACGATTCGGTTCTTC 96890
Query 115813 ATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCA----CGAGGTGCTTATTGAC 115868
|| || ||| ||||||| || || |||| | | ||| | |||||
Sbjct 96889 ATGGTCTCATTCCACAGACCAACCTCAACCAGGTCCTTGAGCAGCCAGGGG----TTGAC 96834
Query 115869 AACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCGTGTATGGCTCAA 115927
|| ||||| || || || |||| ||| || ||||||| ||||| ||||| |
Sbjct 96833 AATCTGGAACTCGCCAGCAAGCACTCGTCG-AGAGTAAATGTTGGAGGTGTAGGGCTCGA 96775
Query 115928 AGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAA 115987
||||||| ||| || | || || | |||||||| ||||||||||| || | || |
Sbjct 96774 AGCACTCGTTGAAGCCGAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGAGCAACCAGCA 96715
Query 115988 GGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGA 116047
| ||| || | ||| | | | || |||| || ||||||| || | |
Sbjct 96714 GCGAGTTTCGCATACCGGTCTTCATGATATTGGCCTTAAGATCGTCCCACTCCCAA---A 96658
Query 116048 GCTTTGTCTC---CCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATC 116104
||| | | | | ||||| |||||||| ||| || ||| || || || |
Sbjct 96657 GCTCGGAGGGAGTCACGTTCCACAGGTCAAACTGAAGGTCTCCCCTGGAGGCAGGAGAGC 96598
Query 116105 CCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTG 116164
||| || ||||| || | || || | |||| ||| | ||||||| ||||
Sbjct 96597 CCTGGAAGGTCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGAGGCCTCGACGGCTC 96538
Query 116165 CGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACG 116224
|||| || || ||||| || || | || | |||||||||| | || ||||| |
Sbjct 96537 CGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCAGACTCAAAGG 96478
Query 116225 CGAGACGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGA 116283
|| || || | || || || || ||||| || ||||| || |||| || |||
Sbjct 96477 GAAGTCG-CAGAGCCATGAAGGTGTCGGCCAGACCCTGAACACCCAGAGCAATAGGTCGA 96419
Query 116284 TGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACC 116340
|||| ||| || ||||| || ||| ||||| || | || | |||||||
Sbjct 96418 TGTCGCATGTTGGACTTCTTTGC---CTCGGGAACGGGGTAGTAGTTTCGGTCGATAATG 96362
Query 116341 CTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA---- 116396
|| || ||| | || || | ||| || || ||||| | | | || |
Sbjct 96361 GCGTTGAGGTTTCGCACAATGACTTTGGCGATATCGTGCAGCTTCTTGAAGTCGTAGAAG 96302
Query 116397 -ACTGCGAGTC-TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 116454
| | | ||| ||| | ||||| | | || ||||| || || ||||| || || |||
Sbjct 96301 GAGTTGGTGTCGTCTCGAGTGACAAAGGTGGGCAGGGCAATGGAGGCCAGGTTGCAAACA 96242
Query 116455 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 116514
| |||||| | || |||||| | ||| || |||| || ||| ||| |||
Sbjct 96241 GCCACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAGCACAGGTTGGAAGACTTGATG 96182
Query 116515 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGC 116574
|| || | |||||| || || |||||| ||| || ||||||||||||||||| | ||
Sbjct 96181 GTTCCGAGGTTCTTCTGGTTGGACTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGG 96122
Query 116575 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGT 116633
| || | ||| || ||| | | |||||| | ||| | | || | ||| || | ||
Sbjct 96121 TTACCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCTTCTG-GGCGGGGATGGT 96063
Query 116634 GGCGTTG-GCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCA 116692
||| | |||| ||||||| |||||||| ||| || || ||||| || ||
Sbjct 96062 -TCGTCGACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTTGAACTCGTCGCCGT 96004
Query 116693 CAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCT 116752
| || || || || || | || || | ||||| ||| | | || ||
Sbjct 96003 AGACGTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTCCACTCGGCGTTCTGCT 95944
Query 116753 CAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAG 116812
| || |||| |||||| || || |||||||| || ||| ||| || || || |||
Sbjct 95943 CGACTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACAGGTCTCGGGCTCGAA 95884
Query 116813 CTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACG 116872
|| || | || || || |||| ||| | || || | ||| || ||||||| |
Sbjct 95883 TCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCGTGCCAGG 95824
Query 116873 GTTCCAGGTACACCGCGATTGACCC--CTTGC--GACGACCAGCCTGGTTTACATACCTC 116928
| || ||||||| || | | || | || | | || |||||| || || |
Sbjct 95823 GCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTG-CCTCCCTGGTCCACGTATCGG 95765
Query 116929 GCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCC 116988
|| || ||| | || || ||||| || | |||||| | || || || || ||
Sbjct 95764 GCAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTGCCG 95705
Query 116989 CGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCC 117046
|| || ||| | | |||||| || | ||||||| | ||| ||||| || ||
Sbjct 95704 GCAATGTAGGAGCC--GGTGGCTCGGATGTTGTGGATGGAGAGACCGATACCGCCAGCAG 95647
Query 117047 ACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCT 117106
|||| || || | || || | |||| | ||||||| || ||||| ||||| |||
Sbjct 95646 ACTTGGAAATCAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCT 95587
Query 117107 TATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGG 117166
| | || ||||| || |||||| || ||| || || ||||||||| ||||||
Sbjct 95586 TCATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAGAGGG 95527
Query 117167 TTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAG 117225
| || | |||||| | || ||| | || ||||| | | ||||||||| | | | |
Sbjct 95526 TGGGGGAAGCGTGGGT-AAAGTACTTCTGAGACATGTAGTTGTAGGTCTCGATGGCTCGG 95468
Query 117226 GGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGT 117279
| |||||| || ||||| || |||| || || ||||| | ||| | ||||||
Sbjct 95467 GCAATGTCGTCACCGTGGATTCCGACGGACACTCGCATGATCATCTGCTGGGGT 95414
>seq3
Length=1361780
Score = 134 bits (148), Expect = 2e-26
Identities = 355/533 (67%), Gaps = 22/533 (4%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| ||| ||||||||||||||||| ||||| || | || ||| ||||||||
Sbjct 15203 GTAGTCGGAGACTCGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGAGAGATGTTCTCCAT 15144
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAAT-----TGTTGGC-ACCCCAATCTGTTTGAG 127344
|| || || ||||| | ||||| | | ||||| | | ||| | ||
Sbjct 15143 GAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTGGTGTTGCCGAGAGCAACC------AG 15090
Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404
|| || || | ||| |||||||||||| |||| || | |||||| |||| ||
Sbjct 15089 CAGTCGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAG 15030
Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464
||| || || ||||| | |||| ||| ||| ||| | ||||| || | ||
Sbjct 15029 ACCACAGGGCAGAGCGTCGGTCAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGAC 14970
Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCACAG-CA 127522
| | | | | | | | |||| || | | || |||||| |||| ||
Sbjct 14969 GTCCTCGACAATCTTCTTGGAGGGTCGGTT-CTCGAGGTGAGAGAAGAGCAG-ACAGGCA 14912
Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582
|| || ||| ||||||||||| || || ||||| || || |||||| || || |||
Sbjct 14911 AAGTCGGTGTGCAGACCCTCGTCTCGAGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGC 14852
Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642
|||||||| |||||||| | |||||| || | || ||||| ||||| ||||| |||
Sbjct 14851 ATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCTGAGAAAAAGATACCC 14792
Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGTATCAAA-C 127699
|| || || || |||| || |||||| |||||| ||||| | || ||| |
Sbjct 14791 TCGACGGCGGCAAAGGCAATGAGCCGCTCGCCAAAGG---TGGACTCCTCGTCGGAAATC 14735
Query 127700 CACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752
||||| | ||||| | ||||| |||| ||| || |||| ||||| ||| ||
Sbjct 14734 CACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 14682
>seq1
Length=2434256
Score = 89.7 bits (98), Expect = 6e-13
Identities = 280/428 (65%), Gaps = 8/428 (2%)
Strand=Plus/Plus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
|| || |||||||| || || |||||||| |||||| | | | |||||| | |
Sbjct 1212439 CGTAGATAGTACATGCCTGTTTTGAGCCCGGCCTTCCATCCGTGGAAATGCATCGCTGTG 1212498
Query 115618 AACTTGGAGAGTGTTGGACTTTC---CATGAAGAGGTTCATACTTTGGGATTGATCGATG 115674
| ||| | | || || | || |||||| | ||| | | || || || || |||
Sbjct 1212499 ATTTTGCCGTGGGT--GA-TATCGGGCATGAAAATGTTGAGAGACTGCGACTGGTCAATG 1212555
Query 115675 AAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTT 115734
|| | | ||| ||||||||||||| || | | |||||| ||||| | ||
Sbjct 1212556 TAGGGAGCTCGAGCCGCCGCCATATCGATAATGTTGCGAGCCTTGATCTCCCAAGCGGTC 1212615
Query 115735 CTGTAGA-GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGC 115793
|| |||| || || | || | || ||||| | |||| | || || |||||| |
Sbjct 1212616 CTATAGACGGCTC-TGATGTGTTCGGGGATCTGGGTGATACTCTGTATCGAGCCATTGTC 1212674
Query 115794 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCAC 115853
| || || | | ||||| |||| | ||| | || | ||| ||||||| | ||
Sbjct 1212675 GTGGATGATTCGGTTTTTCATCTCCTCGGTCCACATGCCCAGCTTGATGAGATCTTTCAT 1212734
Query 115854 GAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGT 115913
|| | |||| || | |||||| || || || || | ||| || |||||||
Sbjct 1212735 CAGCCAATGGTTGATCACCAGAAACTCGCCTGCCTGGACTCGACGCAGGTAAATGTTGGA 1212794
Query 115914 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCAT 115973
|||||| |||||||| ||||| |||| |||| || || | ||||| ||||| |||||
Sbjct 1212795 CGTGTACGGCTCAAAACACTCGTTGTGGCCCAGAATCTGAGAAGTGGACGCTGTAGGCAT 1212854
Query 115974 GGGTGCCA 115981
|| ||||
Sbjct 1212855 AGGAGCCA 1212862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506862571040
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