Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq3 251 1e-61
seq24 230 4e-55
seq1 138 2e-27
>seq3
Length=1361780
Score = 251 bits (278), Expect = 1e-61
Identities = 572/856 (67%), Gaps = 11/856 (1%)
Strand=Plus/Minus
Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687
||||| ||| | || || ||||||||| ||||||||||| || ||| || ||
Sbjct 15209 CTTCTGGTAGTCGGAGACTCGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGAGAGATGTT 15150
Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747
|||||||| |||| ||||| | || ||| ||| | |||||||| ||||
Sbjct 15149 CTCCATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTGGTGTTGCCGAGAGCAACCAG 15090
Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAG 159807
|| | ||| || ||||| || ||||| ||||| ||| ||| || || |||||
Sbjct 15089 CAGTCGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAG 15030
Query 159808 CCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAAT 159867
| | ||| || || || | ||| ||||||| ||| || | || || ||| |||||
Sbjct 15029 ACCACAGGGCAGAGCGTCGGTCAGGAACTCCTGCTCGATGCCAACAGCCTCG---ACAAT 14973
Query 159868 C---TGCGAGACACGTTCGTACCCCGGCTTGCCCAAAAT-GTGGTCCTTAAACAGGAGGC 159923
| | |||| || | | || | | | | ||| || || || |
Sbjct 14972 GACGTCCTCGACAA--TCTT--CTTGGAGGGTCGGTTCTCGAGGTGAGAGAAGAGCAGAC 14917
Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983
| ||||||||| |||||| |||||||| ||||| |||| ||||||||| | | ||||||
Sbjct 14916 AGGCAAAGTCGGTGTGCAGACCCTCGTCTCGAGAAATGAGCTCGTTGGAGAAGGTGAGGC 14857
Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043
| ||||||| || ||| |||||||| || |||| || |||| || |||||||
Sbjct 14856 CGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCTGAGAAAAAGA 14797
Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGG 160103
| ||||| ||||| ||||| || | ||||| ||| ||||| | || | |||
Sbjct 14796 TACCCTCGACGGCGGCAAAGGCAATGAGCCGCTCGCCAAAGGTGGACTCCTCGTCGGAAA 14737
Query 160104 TCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAA 160163
||||| | ||||| || |||||||| |||||| || ||| ||||| |||||| |
Sbjct 14736 TCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGA 14677
Query 160164 ACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTT 160223
||| || ||||||| |||||||| || | || ||| |||||| |||
Sbjct 14676 ACAGGTAGTTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATGAGCAGCGAGTAGGTTT 14617
Query 160224 CTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACT 160283
| | ||| | || || || ||||| ||| |||||| | | ||||| || ||
Sbjct 14616 CCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGAGCCT 14557
Query 160284 GCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAA 160343
| ||||| | ||| | | |||| || | || || | ||||||| ||| ||||
Sbjct 14556 GGACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTGACGATTCCGTCGGAGGCAGCAA 14497
Query 160344 AGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT 160403
|||| |||| |||||||||||||| || |||||| |||||||||| || |||||||
Sbjct 14496 AGAAGGCCAGAACGTGAGAGATGAAGAATCGCTCGTCGTTGTTGAGTCGGTTCTCCCAGT 14437
Query 160404 GTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTT 160463
|| ||| | | | | ||| | ||| || || |||| || ||||| ||| | |
Sbjct 14436 CGCCCATGTCCTTGCCGAGATCGATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCTTCT 14377
Query 160464 TGTACATGGCCCAGAT 160479
||||||| ||||||
Sbjct 14376 TGTACATCTGCCAGAT 14361
>seq24
Length=170883
Score = 230 bits (254), Expect = 4e-55
Identities = 346/485 (71%), Gaps = 10/485 (2%)
Strand=Plus/Minus
Query 203849 GTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGG 203908
|||||||| |||| | | |||| | || ||| ||| |||||||| || ||||| ||
Sbjct 97177 GTGAACTGGATGGGGGCGGCAGCAGCCATGGTTCGCAGGTAGTACATACCAGTCTTGAGA 97118
Query 203909 CCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATG 203968
||||||| ||| ||||| | ||||||||| | || |||| || | ||||||| |||
Sbjct 97117 CCCTTCTTCCAGCCGTAGAAGTGCATGGAGGTGAGCTTGCCCATGGTGGGGTCCTTGATG 97058
Query 203969 TGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATA 204028
|||||||| || |||||| ||||| ||||| |||| || || || ||||| | |||
Sbjct 97057 TGAATGTTGAGGGACTGGGACTGGTCAATGAAGGGCGATCGGTCGGCAGCCATCTCGATG 96998
Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGAGGCACA 204088
|| ||||||||||||||||||||| || | ||| ||| || | | || || |
Sbjct 96997 ATTCGCTTCTGCGAAATCTCCCACACGGTTCGGTACAGGTCCTTGATCTCCTGGGGGATG 96938
Query 204089 TCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTC---TCATCCTCGTCTCCTC 204144
| | | || ||| | || ||||||||||||| | || || || | ||||| |
Sbjct 96937 T-TGGGGATGTTCTGCACGGATCCGTTGTCGGCCACGATTCGGTTCTTCATGGTCTCAT- 96880
Query 204145 CCCCCACATGCCCAACCT-GATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGT 204203
||||| | ||||||| | ||| ||| | ||| |||||||| ||||| || |
Sbjct 96879 --TCCACA-GACCAACCTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACAATCTGGAACT 96823
Query 204204 CTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGT 204263
| || | ||||| | ||| | | | | |||| |||| | || ||||| |||||||
Sbjct 96822 CGCCAGCAAGCACTCGTCGAGAGTAAATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGA 96763
Query 204264 TGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCA 204323
||||| |||||||| |||| ||| |||||||||||||| | ||||| ||||| ||||
Sbjct 96762 AGCCGAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGAGCAACCAGCAGCGAGTTTCGCA 96703
Query 204324 CACCG 204328
||||
Sbjct 96702 TACCG 96698
Score = 165 bits (182), Expect = 1e-35
Identities = 453/680 (67%), Gaps = 18/680 (3%)
Strand=Plus/Minus
Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990
|| |||||| ||||| ||||| || | |||||||| | |||||| || | ||| |||
Sbjct 96170 CTTCTGGTTGGACTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCGGACTC 96111
Query 204991 CATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACA 205049
|||| | ||| ||||||||| ||||| | | || | || ||| ||
Sbjct 96110 GGTCTGGCAGTCG-AGAATGTGGTACCACAGCTTCTGGGCGGGGA--TGGTTCGTCGACC 96054
Query 205050 TC--CCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCAT 205107
|| || | |||||| | ||||||| | || || ||||| |||||
Sbjct 96053 TCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTTGAACTCGTCGCCGTAGACGTCGTC 95994
Query 205108 CAGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTC---ACCCT 205164
||| || ||||| | ||||| ||||| |||| |||| || | ||| | | || |
Sbjct 95993 CAGACCGGGACACTCGTTGGGGCACATGAGAGTCCAC-TCGG--CGTTCTGCTCGACTCG 95937
Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224
|||||| ||||| ||| |||||||||| | ||||| || ||||| | ||| | ||
Sbjct 95936 CTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACAGGTCTCGGGCTCGAATCTCCTC 95877
Query 205225 GTCTCCAAGGTTCTTTTTCAAGTC-CAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCT 205282
| ||| |||||||| || || ||| || || | |||||| ||||||| |||||
Sbjct 95876 CTTTCCGTGGTTCTTTCGCAGCTCGCAG--AACTCGAAGATGTCGTCGTGCCAGGGCTCA 95819
Query 205283 AACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATC 205342
| ||| ||| | || || || | |||||| || ||||||||||| || | |
Sbjct 95818 AGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCCTGGTCCACGTATCGGGCAGTG 95759
Query 205343 GCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATG 205402
|||| | || |||||||| ||||| | |||||||| ||| ||||| |||| | |||
Sbjct 95758 TTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTGCCGGCAATG 95699
Query 205403 GCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCG 205462
||||| || | | |||| ||||| || || ||||||| | ||||||
Sbjct 95698 TAGGAGCCGGTGGCTCGGATGTTGTGGATGGAGAGACCGATACCGCCAGCAGACTTGGAA 95639
Query 205463 ATCTGGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGT 205521
||| | || || ||||| || || ||||||||| ||||||| |||||| || |
Sbjct 95638 ATCAGAGCACAGGTCTTG-AGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTT 95580
Query 205522 CACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581
|| || | ||||| | || || || | ||| || |||| | |||| ||||||
Sbjct 95579 GACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAGAGGGTGGGGGA 95520
Query 205582 GGCGTGGCTGAAGCGCTTCT 205601
|||||| | ||| |||||
Sbjct 95519 AGCGTGGGTAAAGTACTTCT 95500
>seq1
Length=2434256
Score = 138 bits (152), Expect = 2e-27
Identities = 495/765 (65%), Gaps = 18/765 (2%)
Strand=Plus/Plus
Query 203836 CGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACAT 203895
|| ||| || || |||||||||||||| | | ||||| | | |||||||||||
Sbjct 1212393 CGACTTATCAACGGTGAACTGAATGGCATGGGCAGCAGGTGGAGTACGTAGATAGTACAT 1212452
Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955
||| || || || || || ||| |||| | ||||| | | | ||||| |||
Sbjct 1212453 GCCTGTTTTGAGCCCGGCCTTCCATCCGTGGAAATGCATCGCTGTGATTTTGC---CGTG 1212509
Query 203956 GGGG---TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATC 204012
|| | |||| |||| |||||| |||||||| ||||| ||| | || || ||| |
Sbjct 1212510 GGTGATATCGGGCATGAAAATGTTGAGAGACTGCGACTGGTCAATGTAGGGAGCTCGAGC 1212569
Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCT 204072
|| ||||||| ||||||| | | |||||||| | ||| | | ||| ||||
Sbjct 1212570 CGCCGCCATATCGATAATGTTGCGAGCCTTGATCTCCCAAGCGGTCCTATAGACGGCTCT 1212629
Query 204073 GGTGTGTTGAGGCACATCT---TCCCACGTCCTGATCGAGCCGTTGTCGGCCATCAGTCT 204129
| |||||| || | ||| | || || |||||||| |||||| || | ||
Sbjct 1212630 GATGTGTTCGGGGA--TCTGGGTGATAC-TCTGTATCGAGCCATTGTCGTGGATGATTCG 1212686
Query 204130 CATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTT 204189
| || ||||||| ||||||||||| | |||| || || || ||| ||||
Sbjct 1212687 GTTTTTCATCTCCTCGGTCCACATGCCCAGCTTGATGAGATCTTTCATCAGCCAATGGTT 1212746
Query 204190 GATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTC 204249
||| | | |||| || || | | | || | || | | | |||| ||| | || ||
Sbjct 1212747 GATCACCAGAAACTCGCCTGCCTGGACTCGACGCAGGTAAATGTTGGACGTGTACGGCTC 1212806
Query 204250 GAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAG 204309
|| |||||||| ||| | |||||||| ||| || || ||||| ||||||| ||
Sbjct 1212807 AAAACACTCGTTGTGGCCCAGAATCTGAGAAGTGGACGCTGTAGGCATAGGAGCCACTAG 1212866
Query 204310 CAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAG-AGAGGTCCAGTCGTGCA 204368
|| ||||| |||| ||||| ||| || | | ||| || ||| | ||| || ||
Sbjct 1212867 CAACGAGTTTCGCATACCGTGTTTGGCGAGCTTCGACTTTAGCAGA-GCCCAATCCCACA 1212925
Query 204369 TCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGC 204428
| ||| || | ||||| || ||||| || | || || || | || ||||
Sbjct 1212926 GGTCTGAGGGGGTCTTGTTCCACAAATCAAACTGCAACTTACCCTGGCTAGCAGGACTGC 1212985
Query 204429 CCTTGTACGTCGGATAAGG--CTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGC 204486
||| ||| ||| || || || | || | ||||||| | || || | |||
Sbjct 1212986 CCTCGTAGGTCTCGTAGGGTCCTAGT--TCAGCAGCCAGCTCGATGGAAGCCTCGCAGGC 1213043
Query 204487 GTGATAGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCGGCCTCCGTTCCGTCAAA 204546
| || ||| || || || || || ||||||| || ||| ||||| | |||| |
Sbjct 1213044 GGCATGGTAGATTGTTTCGAAAATGAGAACGTTCAACTCGGCAGCCTCGAGACTGTCATA 1213103
Query 204547 CGCCAGACCCAGCATGGCAAACACGTCCGCCAAGCCCTGCACTCC 204591
| || | |||| | ||||||||| |||| ||||| || ||
Sbjct 1213104 GGGCATTCGCAGCTTCATAAACACGTCAGCCAGACCCTGGACACC 1213148
Score = 93.3 bits (102), Expect = 7e-14
Identities = 395/619 (64%), Gaps = 4/619 (1%)
Strand=Plus/Plus
Query 204928 ATGCTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTT 204987
|| || |||||| || || ||| ||| ||| || |||| ||||||||| ||| |
Sbjct 1213428 ATTCTTCTGGTTGGATTTCGCGTTGCAGCTGTCTTTATACAGCATGAACGGGCCTCCAGT 1213487
Query 204988 CTCCATCTGAGATCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTA 205047
|| ||||| | |||||| | ||| || | || || | |||| |||
Sbjct 1213488 TTCAATCTGGCTTGTCAGAATCGCCTTGAACAGCTCCTGGGCGTCGATTTGCGAGTTGTA 1213547
Query 205048 CATCCCTTGAGACTCGTATTTTGTGTACA-GCGCCACAAAGTCAGAACCGTACACGTCCA 205106
|| | | |||||||||| | | |||| ||| ||| |||| || | | |||
Sbjct 1213548 CAGCTTTCGAGACTCGTACTCTTCGTACTTGCGGTCGAAA-TCAGGTCCCCAGATGTCTG 1213606
Query 205107 TCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTC-ACCCTC 205165
||| || ||| ||||||||||| | || ||||| ||| | |||||| || |||
Sbjct 1213607 CCAGTCCGGGAGCCTTTTTGGGACAGAAAAGCGACCATTTCT-CGCCTCTTTCGACTCTC 1213665
Query 205166 TCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCG 205225
| ||| ||||| ||| | ||| | ||||||| |||||||| || || || | |||
Sbjct 1213666 TTCATGAACAGATCGGGAACCCATAATGCGTAAAAGAGATCACGTGCTCTGTTTTCCTCG 1213725
Query 205226 TCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAAC 205285
|||| |||| || || | || || || ||| || || ||||| ||||| ||
Sbjct 1213726 GCTCCGTGGTTTTTGCGCAGATTCAAGAAATCCAAAATATCCGCATGCCATGGCTCCAAG 1213785
Query 205286 CACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCG 205345
| || || | || || || | |||||| || || |||||||| | | |
Sbjct 1213786 TAGACTGCAAACGCTCCAGGACGCTTGTTGCCGCCTTGGTCCACGTATCTGGCTGTGTTA 1213845
Query 205346 TTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCC 205405
||||| ||||| ||||| || || | || || | || | | || |||||
Sbjct 1213846 TTGAACACTCGGAGCATGGGAACAATGCCTGAGGATTTTCCCTGAGAGCCTGTGATGATG 1213905
Query 205406 GAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATC 205465
| ||| | ||| || | |||| ||| | || || || || | ||| | ||
Sbjct 1213906 GTGCCCTTAGCTCTGATGTTGTGGATATGCAGACCTATGCCTCCTGCGGTCTTTGAAATT 1213965
Query 205466 TGGGCGCACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACC 205525
||||||||| || |||||| ||||||||| ||||||| || || || | |||
Sbjct 1213966 TGGGCGCACGTTTTGAGAGTGTCGTAGATGCCGTCGATGGAGTCTTCGCTCATGGCGACC 1214025
Query 205526 AGATAGCACGAAGCCAGCT 205544
||| |||| || | ||||
Sbjct 1214026 AGAAAGCAGGACGATAGCT 1214044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154762664640
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