Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq3 140 4e-28
seq1 116 5e-21
>seq3
Length=1361780
Score = 140 bits (154), Expect = 4e-28
Identities = 173/235 (74%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 102099 GCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 102158
|||||| | || | || || || | ||||| || || |||||| | |||||| || |
Sbjct 14682 GCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCTCTCAAGTGGATT--T 14739
Query 102159 ACAAAGTCGCGTTC--CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCT 102216
| | | | || | ||||| ||||| ||| | || ||||| || ||||||||||
Sbjct 14740 CCGACGAGGAGTCCACCTTTGGCGAGCGGCTCATTGCCTTTGCCGCCGTCGAGGGTATCT 14799
Query 102217 TCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 102276
| ||||| || || ||| | | || | |||||||||||||||||||||||||| || |
Sbjct 14800 TTTTCTCAGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCC 14859
Query 102277 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
|| ||||||||||||||| || ||||| |||||||| || ||| || |||||
Sbjct 14860 TCACCTTCTCCAACGAGCTCATTTCTCGAGACGAGGGTCTGCACACCGACTTTGC 14914
>seq1
Length=2434256
Score = 116 bits (128), Expect = 5e-21
Identities = 326/492 (66%), Gaps = 15/492 (3%)
Strand=Plus/Minus
Query 111704 GTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAG 111763
||||| ||||| | |||||||| ||||| || || || || | ||| | ||
Sbjct 1214094 GTTCACACACGCTTCTCCAACCCTGTTCAATGCAGGCACTCCCCGGGGCCAGCTATCGTC 1214035
Query 111764 TTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGA 111823
|| || || | || | | || || || ||| | ||||| |||| ||||||||
Sbjct 1214034 CTGCTTTCTGGTCGCCATGAGCGAAGACTCCATCGACGGCATCTACGACACTCTCAAAAC 1213975
Query 111824 ATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGC 111883
|| |||||||| |||||| || || || || || |||| ||||| | |||||||
Sbjct 1213974 GTGCGCCCAAATTTCAAAGACCGCAGGAGGCATAGGTCTGCATATCCACAACATCAGAGC 1213915
Query 111884 CAACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCG 111943
|| | || | ||| | | || |||| || ||| |||| ||||| ||
Sbjct 1213914 TAAGGGCACCATCATCACAGGCTCTCAGGGAAAATCCTCAGGCATTGTTCCCATGCTCCG 1213855
Query 111944 CGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATC 111997
|| || || |||||| | || || |||||| || ||||| ||| |
Sbjct 1213854 AGTGTTCAATAACACAGCCAGATACGTGGACCAAGGCGGCAACAAGCGTCCT---GGAGC 1213798
Query 111998 TATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGT-TGCGTC 112056
| |||||||| | ||||||||||| |||||||| |||| ||| |||| | ||||
Sbjct 1213797 GTTTGCAGTCTACTTGGAGCCATGGCATGCGGATATTTTGGATTTC-TTGAATCTGCGCA 1213739
Query 112057 TCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCA 112115
||||| || | ||||| | | || || |||||||| | ||| | ||| ||||
Sbjct 1213738 AAAACCACGGAGCCGAGGAAAA-CAGAGCACGTGATCTCTTTTACGCATTATGGGTTCCC 1213680
Query 112116 GATCTCTTCATGAAGAGAGTTG-AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAA 112174
||||| |||||||||||||| | | ||| | | || ||||| || || ||||| | ||
Sbjct 1213679 GATCTGTTCATGAAGAGAGTCGAAAGAG-GCGAGAAATGGTCGCTTTTCTGTCCCAAAAA 1213621
Query 112175 GGCACCCGGTCT 112186
||| ||||| ||
Sbjct 1213620 GGCTCCCGGACT 1213609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742058591680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |