Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq24 271 9e-68
seq3 145 9e-30
>seq24
Length=170883
Score = 271 bits (300), Expect = 9e-68
Identities = 1154/1792 (64%), Gaps = 67/1792 (4%)
Strand=Plus/Minus
Query 105558 TGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTC 105617
||||||| || ||| || ||| | | ||| || |||||||| || |||||||| |
Sbjct 97176 TGAACTGGATGGGGGCGGCAGCAGCCATGGTTCGCAGGTAGTACATACCAGTCTTGAGAC 97117
Query 105618 CTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGA 105677
| | ||||| |||| | ||||| || | ||||||| ||| || || | |||
Sbjct 97116 CCTTCTTCCAGCCGTAGAAGTGCATGGAGGTGAGCTTGCCCATGGTGGGGTCCTTGATGT 97057
Query 105678 AAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATATCAAT 105735
|| || | ||| |||| ||||||||||| | || | || ||||| || ||
Sbjct 97056 GAATGTTGAGGGACTGGGACT--GGTCAATGAAGGGCGATCGGTCGGCAGCCATCTCGAT 96999
Query 105736 GACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGAT 105795
|| |||| | || |||||||| || ||||| || | |||||| || | |||||
Sbjct 96998 GATTCGCTTCTGCGAAATCTCCCACACGGTTCGGTACAGGTCCTTGATCTCCTGGGGGAT 96939
Query 105796 ATCTGAGATATTTTGAATTGAACCCC---CCGCCTTGACCATGAGATCCTTCATATCCTT 105852
| | ||| || || | || || | ||| || || | | |||||| ||
Sbjct 96938 GTTGGGGATGTTCTGCACGGATCCGTTGTCGGCC---ACGATTCGGTTCTTCATGGTCTC 96882
Query 105853 GGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTC 105912
||| ||||||| || || || |||| || |||||||||| |||||
Sbjct 96881 ATTCCACAGACCAACCTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACAATCTGGAACTC 96822
Query 105913 TCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTAT 105971
|| || || || || ||| || ||||| | |||||||| || ||||| || ||
Sbjct 96821 GCCAGCAAGCACTCGTCG-AGAGTAAATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGA 96763
Query 105972 TACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 106031
|| | || || | ||||||||| || ||||| || || | || || ||| || |
Sbjct 96762 AGCCGAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGAGCAACCAGCAGCGAGTTTCGCA 96703
Query 106032 GACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTT---- 106087
||| | | | |||| |||| ||| | ||||| || | |||| ||
Sbjct 96702 TACCGGTCTTCATGATATTGGCCTTAAGATCGTCCCACTCCCAA---AGCTCGGAGGGAG 96646
Query 106088 TCACCTTCCCACATATCAAATTGAAG--CACCCCTTGGGACGTGGGAGAACCCTCAAATG 106145
|||| |||| ||| ||||| ||||| | ||||| ||| | ||||| |||| || |
Sbjct 96645 TCACGTTCC-ACAGGTCAAACTGAAGGTCTCCCCT--GGAGGCAGGAGAGCCCTGGAAGG 96589
Query 106146 TCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACA 106205
|||| |||| ||| | | ||||| || | ||||| | || | |||| || |
Sbjct 96588 TCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGAGGCCTCGACGGCTCCGTGGTAGA 96529
Query 106206 TGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGC 106265
|||| || ||||| | || | || |||||| || | || ||||| | | || ||
Sbjct 96528 TGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCAGACTCAAAGG-GAAGTCGC 96470
Query 106266 ACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATA 106324
| | || || || || ||||| |||||||||| | ||||||||| ||||||||
Sbjct 96469 AGAGCCATGAAGGTGTCGGCCAGACCCTGAACACCCAGAGCAATAGGTCGATGTCGCATG 96410
Query 106325 TTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGA 106381
|| ||||| || ||| |||||| || | |||| ||| || | ||| ||
Sbjct 96409 TTGGACTTCTTTGC---CTCGGGAACGGGGTAGTAGTTTCGGTCGATAATGGCGTTGAGG 96353
Query 106382 TTTTTGGTAACAAT--CTTTGT-GATTTCATGAAGTTTTTCATAATCAAA-----AGTGC 106433
||| ||||| ||||| ||| || || || || | | || | |||
Sbjct 96352 TTTCGC---ACAATGACTTTGGCGATATCGTGCAGCTTCTTGAAGTCGTAGAAGGAGTTG 96296
Query 106434 GAGTC-TCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTC 106492
| ||| ||| | ||||| | | || ||||| || || |||| |||||||||||| |
Sbjct 96295 GTGTCGTCTCGAGTGACAAAGGTGGGCAGGGCAATGGAGGCCAGGTTGCAAACAGCCACC 96236
Query 106493 TCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCC 106552
||||| | | |||||| | ||| || |||| ||||||| ||| || || ||
Sbjct 96235 TCATCGGGAGAAGAGTACTCGACAATCTCGCAGCACAGGTTGGAAGACTTGATGGTTCCG 96176
Query 106553 AAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCC 106612
| ||||| ||||| |||| |||||| |||||||||||||||||| |||| | ||
Sbjct 96175 AGGTTCTTCTGGTTGGACTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCG 96116
Query 106613 GTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGG--CG 106669
| ||| ||||| | | |||||| | ||||| | || | ||| || |||| ||
Sbjct 96115 GACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCTTCTG-GGCGGG---GATGGTTCG 96060
Query 106670 TTGGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAG-GGCTTCAAACTCCTCACCCACCG 106727
| | || || |||||| |||||||| ||| || |||| ||||| || ||
Sbjct 96059 TCGACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTT-GAACTCGTCGCCGTAGA 96001
Query 106728 CGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAA 106787
||||| ||||| || || || || || | |||| ||| | | || ||| |
Sbjct 96000 CGTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTCCACTCGGCGTTCTGCTCGA 95941
Query 106788 CCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCT 106847
| |||| |||||| || || || |||||||||| || || |||| ||| ||
Sbjct 95940 CTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACAGGTCTCGGGCTCGAATCT 95881
Query 106848 CTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT 106907
| || | || ||||| ||| | ||| |||||| | ||| || ||||||| ||||
Sbjct 95880 CCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCGTGCCAGGGCT 95821
Query 106908 CAAGATAGACTGCGATAGATCC------CTT-TCGACGCCCAGCTTGATTTACATAGCGC 106960
|||| || | || | | ||| ||| | | | ||| || | || || ||
Sbjct 95820 CAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCC----TGGTCCACGTATCGG 95765
Query 106961 GCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC 107020
|| ||| ||| | || || ||||| || | ||||| | || || || || ||
Sbjct 95764 GCAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTGCCG 95705
Query 107021 CGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCAC 107080
||| || |||||| | | |||||| | || ||||| ||||| ||
Sbjct 95704 GCAATGTAGGAGCCGGTGGCTCGGATGTTGTGGATGGAGAGACCGATACCGCCAGCAGAC 95645
Query 107081 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 107140
|| || || | ||||| | | || || | ||||| |||| ||| ||||| |||||
Sbjct 95644 TTGGAAATCAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTTC 95585
Query 107141 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 107200
|| || |||||| || |||||||| || || || ||||| ||| |||||||
Sbjct 95584 ATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAGAGGGTG 95525
Query 107201 GGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATC 107259
|| | ||||| | || ||| | || ||||| | || ||| ||||| | | | |
Sbjct 95524 GGGGAAGCGTGGGT-AAAGTACTTCTGAGACATGTAGTTGTAGGTCTCGATGGCTCGGGC 95466
Query 107260 AATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGT 107311
|||||| || |||||||| |||| || ||| ||||| | ||| | ||||||
Sbjct 95465 AATGTCGTCACCGTGGATTCCGACGGACACTCGCATGATCATCTGCTGGGGT 95414
>seq3
Length=1361780
Score = 145 bits (160), Expect = 9e-30
Identities = 349/520 (67%), Gaps = 16/520 (3%)
Strand=Plus/Minus
Query 116995 ACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAAT 117054
||||||||||| |||||||||||||| || | || ||||| ||||| ||||| ||
Sbjct 15193 ACTCGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGAGAGATGTTCTCCATGAAGTCGAAG 15134
Query 117055 GGATTCTTCGCGTTCCAAA---TGG-GTGGC--ACCCCAACTTGTTTGAGGAGACGATCC 117108
|| || | | ||| | | ||| || || | |||| || || || ||
Sbjct 15133 GGGTTGGTGGAGTTGTAGACCTTGGTGTTGCCGAGAGCAACC------AGCAGTCGGTCG 15080
Query 117109 GACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACATGGG 117168
| ||| |||||||||||| | |||| || | |||||| |||| ||| ||| ||
Sbjct 15079 GCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGACCACAGGGC 15020
Query 117169 AGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGATA 117228
|| ||||| | |||| | | ||| || |||| ||||| | || | | | || |
Sbjct 15019 AGAGCGTCGGTCAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGTCCTCGACA 14960
Query 117229 GTTTCGGTAGTGGGTCTATTACGCAAAGTCTT-GAAGAGCTCCACGGCAAACTCCTGGTG 117287
| | | | ||||| || | | | || ||||||| |||||| || |||
Sbjct 14959 ATCTTCTTGGAGGGTCGGTT-CTCGAGGTGAGAGAAGAGCAGACAGGCAAAGTCGGTGTG 14901
Query 117288 GAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCG 117347
|||||||| ||||| ||||| || || || |||||| ||||| ||||||||||| ||
Sbjct 14900 CAGACCCTCGTCTCGAGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCTCG 14841
Query 117348 CTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGC 117407
|||||| | ||| | || | | ||| || || ||||| ||||||||||| || ||
Sbjct 14840 CTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCTGAGAAAAAGATACCCTCGACGGCGGC 14781
Query 117408 AAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTGCCC 117466
||| |||| || |||||| | |||| | || | | || | || ||| || | ||||
Sbjct 14780 AAAGGCAATGAGCCGCTCGCCAAAGGTG-GACTCCTCGTCGGAAATCCACTTGAGAGCCC 14722
Query 117467 ATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506
| | |||||||||| || || || | || | ||||||
Sbjct 14721 AGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 14682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980475510560
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