Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq24 271 9e-68 seq3 145 9e-30 >seq24 Length=170883 Score = 271 bits (300), Expect = 9e-68 Identities = 1154/1792 (64%), Gaps = 67/1792 (4%) Strand=Plus/Minus Query 105558 TGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTC 105617 ||||||| || ||| || ||| | | ||| || |||||||| || |||||||| | Sbjct 97176 TGAACTGGATGGGGGCGGCAGCAGCCATGGTTCGCAGGTAGTACATACCAGTCTTGAGAC 97117 Query 105618 CTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGA 105677 | | ||||| |||| | ||||| || | ||||||| ||| || || | ||| Sbjct 97116 CCTTCTTCCAGCCGTAGAAGTGCATGGAGGTGAGCTTGCCCATGGTGGGGTCCTTGATGT 97057 Query 105678 AAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATATCAAT 105735 || || | ||| |||| ||||||||||| | || | || ||||| || || Sbjct 97056 GAATGTTGAGGGACTGGGACT--GGTCAATGAAGGGCGATCGGTCGGCAGCCATCTCGAT 96999 Query 105736 GACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGAT 105795 || |||| | || |||||||| || ||||| || | |||||| || | ||||| Sbjct 96998 GATTCGCTTCTGCGAAATCTCCCACACGGTTCGGTACAGGTCCTTGATCTCCTGGGGGAT 96939 Query 105796 ATCTGAGATATTTTGAATTGAACCCC---CCGCCTTGACCATGAGATCCTTCATATCCTT 105852 | | ||| || || | || || | ||| || || | | |||||| || Sbjct 96938 GTTGGGGATGTTCTGCACGGATCCGTTGTCGGCC---ACGATTCGGTTCTTCATGGTCTC 96882 Query 105853 GGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTC 105912 ||| ||||||| || || || |||| || |||||||||| ||||| Sbjct 96881 ATTCCACAGACCAACCTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACAATCTGGAACTC 96822 Query 105913 TCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTAT 105971 || || || || || ||| || ||||| | |||||||| || ||||| || || Sbjct 96821 GCCAGCAAGCACTCGTCG-AGAGTAAATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGA 96763 Query 105972 TACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 106031 || | || || | ||||||||| || ||||| || || | || || ||| || | Sbjct 96762 AGCCGAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGAGCAACCAGCAGCGAGTTTCGCA 96703 Query 106032 GACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTT---- 106087 ||| | | | |||| |||| ||| | ||||| || | |||| || Sbjct 96702 TACCGGTCTTCATGATATTGGCCTTAAGATCGTCCCACTCCCAA---AGCTCGGAGGGAG 96646 Query 106088 TCACCTTCCCACATATCAAATTGAAG--CACCCCTTGGGACGTGGGAGAACCCTCAAATG 106145 |||| |||| ||| ||||| ||||| | ||||| ||| | ||||| |||| || | Sbjct 96645 TCACGTTCC-ACAGGTCAAACTGAAGGTCTCCCCT--GGAGGCAGGAGAGCCCTGGAAGG 96589 Query 106146 TCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACA 106205 |||| |||| ||| | | ||||| || | ||||| | || | |||| || | Sbjct 96588 TCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGAGGCCTCGACGGCTCCGTGGTAGA 96529 Query 106206 TGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGC 106265 |||| || ||||| | || | || |||||| || | || ||||| | | || || Sbjct 96528 TGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCAGACTCAAAGG-GAAGTCGC 96470 Query 106266 ACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATA 106324 | | || || || || ||||| |||||||||| | ||||||||| |||||||| Sbjct 96469 AGAGCCATGAAGGTGTCGGCCAGACCCTGAACACCCAGAGCAATAGGTCGATGTCGCATG 96410 Query 106325 TTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGA 106381 || ||||| || ||| |||||| || | |||| ||| || | ||| || Sbjct 96409 TTGGACTTCTTTGC---CTCGGGAACGGGGTAGTAGTTTCGGTCGATAATGGCGTTGAGG 96353 Query 106382 TTTTTGGTAACAAT--CTTTGT-GATTTCATGAAGTTTTTCATAATCAAA-----AGTGC 106433 ||| ||||| ||||| ||| || || || || | | || | ||| Sbjct 96352 TTTCGC---ACAATGACTTTGGCGATATCGTGCAGCTTCTTGAAGTCGTAGAAGGAGTTG 96296 Query 106434 GAGTC-TCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTC 106492 | ||| ||| | ||||| | | || ||||| || || |||| |||||||||||| | Sbjct 96295 GTGTCGTCTCGAGTGACAAAGGTGGGCAGGGCAATGGAGGCCAGGTTGCAAACAGCCACC 96236 Query 106493 TCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCC 106552 ||||| | | |||||| | ||| || |||| ||||||| ||| || || || Sbjct 96235 TCATCGGGAGAAGAGTACTCGACAATCTCGCAGCACAGGTTGGAAGACTTGATGGTTCCG 96176 Query 106553 AAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCC 106612 | ||||| ||||| |||| |||||| |||||||||||||||||| |||| | || Sbjct 96175 AGGTTCTTCTGGTTGGACTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCG 96116 Query 106613 GTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGG--CG 106669 | ||| ||||| | | |||||| | ||||| | || | ||| || |||| || Sbjct 96115 GACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCTTCTG-GGCGGG---GATGGTTCG 96060 Query 106670 TTGGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAG-GGCTTCAAACTCCTCACCCACCG 106727 | | || || |||||| |||||||| ||| || |||| ||||| || || Sbjct 96059 TCGACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTT-GAACTCGTCGCCGTAGA 96001 Query 106728 CGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAA 106787 ||||| ||||| || || || || || | |||| ||| | | || ||| | Sbjct 96000 CGTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTCCACTCGGCGTTCTGCTCGA 95941 Query 106788 CCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCT 106847 | |||| |||||| || || || |||||||||| || || |||| ||| || Sbjct 95940 CTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACAGGTCTCGGGCTCGAATCT 95881 Query 106848 CTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT 106907 | || | || ||||| ||| | ||| |||||| | ||| || ||||||| |||| Sbjct 95880 CCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCGTGCCAGGGCT 95821 Query 106908 CAAGATAGACTGCGATAGATCC------CTT-TCGACGCCCAGCTTGATTTACATAGCGC 106960 |||| || | || | | ||| ||| | | | ||| || | || || || Sbjct 95820 CAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCC----TGGTCCACGTATCGG 95765 Query 106961 GCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC 107020 || ||| ||| | || || ||||| || | ||||| | || || || || || Sbjct 95764 GCAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTGCCG 95705 Query 107021 CGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCAC 107080 ||| || |||||| | | |||||| | || ||||| ||||| || Sbjct 95704 GCAATGTAGGAGCCGGTGGCTCGGATGTTGTGGATGGAGAGACCGATACCGCCAGCAGAC 95645 Query 107081 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 107140 || || || | ||||| | | || || | ||||| |||| ||| ||||| ||||| Sbjct 95644 TTGGAAATCAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTTC 95585 Query 107141 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 107200 || || |||||| || |||||||| || || || ||||| ||| ||||||| Sbjct 95584 ATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAGAGGGTG 95525 Query 107201 GGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATC 107259 || | ||||| | || ||| | || ||||| | || ||| ||||| | | | | Sbjct 95524 GGGGAAGCGTGGGT-AAAGTACTTCTGAGACATGTAGTTGTAGGTCTCGATGGCTCGGGC 95466 Query 107260 AATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGT 107311 |||||| || |||||||| |||| || ||| ||||| | ||| | |||||| Sbjct 95465 AATGTCGTCACCGTGGATTCCGACGGACACTCGCATGATCATCTGCTGGGGT 95414 >seq3 Length=1361780 Score = 145 bits (160), Expect = 9e-30 Identities = 349/520 (67%), Gaps = 16/520 (3%) Strand=Plus/Minus Query 116995 ACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAAT 117054 ||||||||||| |||||||||||||| || | || ||||| ||||| ||||| || Sbjct 15193 ACTCGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGAGAGATGTTCTCCATGAAGTCGAAG 15134 Query 117055 GGATTCTTCGCGTTCCAAA---TGG-GTGGC--ACCCCAACTTGTTTGAGGAGACGATCC 117108 || || | | ||| | | ||| || || | |||| || || || || Sbjct 15133 GGGTTGGTGGAGTTGTAGACCTTGGTGTTGCCGAGAGCAACC------AGCAGTCGGTCG 15080 Query 117109 GACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACATGGG 117168 | ||| |||||||||||| | |||| || | |||||| |||| ||| ||| || Sbjct 15079 GCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGACCACAGGGC 15020 Query 117169 AGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGATA 117228 || ||||| | |||| | | ||| || |||| ||||| | || | | | || | Sbjct 15019 AGAGCGTCGGTCAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGTCCTCGACA 14960 Query 117229 GTTTCGGTAGTGGGTCTATTACGCAAAGTCTT-GAAGAGCTCCACGGCAAACTCCTGGTG 117287 | | | | ||||| || | | | || ||||||| |||||| || ||| Sbjct 14959 ATCTTCTTGGAGGGTCGGTT-CTCGAGGTGAGAGAAGAGCAGACAGGCAAAGTCGGTGTG 14901 Query 117288 GAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCG 117347 |||||||| ||||| ||||| || || || |||||| ||||| ||||||||||| || Sbjct 14900 CAGACCCTCGTCTCGAGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCTCG 14841 Query 117348 CTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGC 117407 |||||| | ||| | || | | ||| || || ||||| ||||||||||| || || Sbjct 14840 CTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCTGAGAAAAAGATACCCTCGACGGCGGC 14781 Query 117408 AAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTGCCC 117466 ||| |||| || |||||| | |||| | || | | || | || ||| || | |||| Sbjct 14780 AAAGGCAATGAGCCGCTCGCCAAAGGTG-GACTCCTCGTCGGAAATCCACTTGAGAGCCC 14722 Query 117467 ATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 | | |||||||||| || || || | || | |||||| Sbjct 14721 AGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 14682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980475510560